RNA–Protein interactions for RNA: ENST00000528846.5

COLCA2-203, Transcript of colorectal cancer associated 2, humanhuman

TSL 3

Gene COLCA2, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-203ENST00000528846 SYDE2Q5VT97 1194 aa23.18■■□□□ 1.3
COLCA2-203ENST00000528846 CWC27Q6UX04 472 aaKnown RBP23.18■■□□□ 1.3
COLCA2-203ENST00000528846 BTNL9Q6UXG8 535 aa23.18■■□□□ 1.3
COLCA2-203ENST00000528846 NSMFQ6X4W1 530 aa23.18■■□□□ 1.3
COLCA2-203ENST00000528846 NOL8Q76FK4 1167 aaKnown RBP23.18■■□□□ 1.3
COLCA2-203ENST00000528846 TBC1D10CQ8IV04 446 aa23.18■■□□□ 1.3
COLCA2-203ENST00000528846 PCSK9Q8NBP7 692 aaKnown RBP23.18■■□□□ 1.3
COLCA2-203ENST00000528846 VTI1AQ96AJ9 217 aa23.18■■□□□ 1.3
COLCA2-203ENST00000528846 GLT1D1Q96MS3 346 aa23.18■■□□□ 1.3
COLCA2-203ENST00000528846 RANBP17Q9H2T7 1088 aaKnown RBP23.18■■□□□ 1.3
COLCA2-203ENST00000528846 TMEM39AQ9NV64 488 aa23.18■■□□□ 1.3
COLCA2-203ENST00000528846 MTMR10Q9NXD2 777 aa23.18■■□□□ 1.3
COLCA2-203ENST00000528846 ASGR1P07306 291 aa23.17■■□□□ 1.3
COLCA2-203ENST00000528846 ITGB8P26012 769 aa23.17■■□□□ 1.3
COLCA2-203ENST00000528846 CST5P28325 142 aaPredicted RBP23.17■■□□□ 1.3
COLCA2-203ENST00000528846 C9orf50Q5SZB4 431 aa23.17■■□□□ 1.3
COLCA2-203ENST00000528846 ANKRD33Q7Z3H0 272 aa23.17■■□□□ 1.3
COLCA2-203ENST00000528846 SKAP1Q86WV1 359 aa23.17■■□□□ 1.3
COLCA2-203ENST00000528846 TTC14Q96N46 770 aa23.17■■□□□ 1.3
COLCA2-203ENST00000528846 TOX2Q96NM4 488 aa23.17■■□□□ 1.3
COLCA2-203ENST00000528846 UPF3AQ9H1J1 476 aaKnown RBP23.17■■□□□ 1.3
COLCA2-203ENST00000528846 RNF41Q9H4P4 317 aaPredicted RBP23.17■■□□□ 1.3
COLCA2-203ENST00000528846 DIAPH3Q9NSV4 1193 aa23.17■■□□□ 1.3
COLCA2-203ENST00000528846 CYP39A1Q9NYL5 469 aa23.17■■□□□ 1.3
COLCA2-203ENST00000528846 PLXNA1Q9UIW2 1896 aa23.17■■□□□ 1.3
COLCA2-203ENST00000528846 SMCHD1A6NHR9 2005 aa23.16■■□□□ 1.3
COLCA2-203ENST00000528846 DCDC2CA8MYV0 355 aa23.16■■□□□ 1.3
COLCA2-203ENST00000528846 ZNF213O14771 459 aa23.16■■□□□ 1.3
COLCA2-203ENST00000528846 KIAA0355O15063 1070 aa23.16■■□□□ 1.3
COLCA2-203ENST00000528846 RAG1P15918 1043 aa23.16■■□□□ 1.3
COLCA2-203ENST00000528846 TNFAIP2Q03169 654 aa23.16■■□□□ 1.3
COLCA2-203ENST00000528846 FAAP100Q0VG06 881 aa23.16■■□□□ 1.3
COLCA2-203ENST00000528846 DDX49Q9Y6V7 483 aaKnown RBP23.16■■□□□ 1.3
COLCA2-203ENST00000528846 ELP1O95163 1332 aa23.15■■□□□ 1.3
COLCA2-203ENST00000528846 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.15■■□□□ 1.3
COLCA2-203ENST00000528846 HIP1O00291 1037 aa23.15■■□□□ 1.3
COLCA2-203ENST00000528846 PDHBP11177 359 aa23.15■■□□□ 1.3
COLCA2-203ENST00000528846 SLC17A8Q8NDX2 589 aa23.15■■□□□ 1.3
COLCA2-203ENST00000528846 ESR2Q92731 530 aa23.15■■□□□ 1.3
COLCA2-203ENST00000528846 PURBQ96QR8 312 aaKnown RBP23.15■■□□□ 1.3
COLCA2-203ENST00000528846 ASTN1O14525 1302 aa23.14■■□□□ 1.3
COLCA2-203ENST00000528846 BAATQ14032 418 aaPredicted RBP23.14■■□□□ 1.29
COLCA2-203ENST00000528846 BMP2KLQ5H9B9 411 aa23.14■■□□□ 1.29
COLCA2-203ENST00000528846 EEPD1Q7L9B9 569 aa23.14■■□□□ 1.29
COLCA2-203ENST00000528846 ZKSCAN3Q9BRR0 538 aa23.14■■□□□ 1.29
COLCA2-203ENST00000528846 GTF3C3Q9Y5Q9 886 aa23.14■■□□□ 1.29
COLCA2-203ENST00000528846 CTAGE5O15320 804 aa23.13■■□□□ 1.29
COLCA2-203ENST00000528846 BEX3Q00994 111 aa23.13■■□□□ 1.29
COLCA2-203ENST00000528846 ZNF543Q08ER8 600 aa23.13■■□□□ 1.29
COLCA2-203ENST00000528846 FAM109BQ6ICB4 259 aaPredicted RBP23.13■■□□□ 1.29
COLCA2-203ENST00000528846 PDGFCQ9NRA1 345 aa23.13■■□□□ 1.29
COLCA2-203ENST00000528846 STXBP5LQ9Y2K9 1186 aa23.13■■□□□ 1.29
COLCA2-203ENST00000528846 NEDD4P46934 1319 aa23.12■■□□□ 1.29
COLCA2-203ENST00000528846 CDK7P50613 346 aa23.12■■□□□ 1.29
COLCA2-203ENST00000528846 NKX3-2P78367 333 aa23.12■■□□□ 1.29
COLCA2-203ENST00000528846 GNEQ9Y223 722 aaKnown RBP23.12■■□□□ 1.29
COLCA2-203ENST00000528846 MROH7Q68CQ1 1323 aa23.11■■□□□ 1.29
COLCA2-203ENST00000528846 A0A0U1RQG5 324 aaPredicted RBP23.11■■□□□ 1.29
COLCA2-203ENST00000528846 PTPDC1A2A3K4 754 aa23.11■■□□□ 1.29
COLCA2-203ENST00000528846 ARVCFO00192 962 aa23.11■■□□□ 1.29
COLCA2-203ENST00000528846 NFIBO00712 420 aa23.11■■□□□ 1.29
COLCA2-203ENST00000528846 DYNC1LI2O43237 492 aaPredicted RBP23.11■■□□□ 1.29
COLCA2-203ENST00000528846 SNHG28P0DPA3 235 aa23.11■■□□□ 1.29
COLCA2-203ENST00000528846 SMPD1P17405 629 aa23.11■■□□□ 1.29
COLCA2-203ENST00000528846 EPHB4P54760 987 aa23.11■■□□□ 1.29
COLCA2-203ENST00000528846 IQSEC1Q6DN90 963 aa23.11■■□□□ 1.29
COLCA2-203ENST00000528846 TAPT1Q6NXT6 567 aa23.11■■□□□ 1.29
COLCA2-203ENST00000528846 TLK2Q86UE8 772 aa23.11■■□□□ 1.29
COLCA2-203ENST00000528846 DGKHQ86XP1 1220 aa23.11■■□□□ 1.29
COLCA2-203ENST00000528846 FBXO16Q8IX29 292 aaPredicted RBP23.11■■□□□ 1.29
COLCA2-203ENST00000528846 FAM161BQ96MY7 647 aa23.11■■□□□ 1.29
COLCA2-203ENST00000528846 AP5M1Q9H0R1 490 aa23.11■■□□□ 1.29
COLCA2-203ENST00000528846 ADD3Q9UEY8 706 aaKnown RBP23.11■■□□□ 1.29
COLCA2-203ENST00000528846 KDM4AO75164 1064 aa23.1■■□□□ 1.29
COLCA2-203ENST00000528846 FPGSQ05932 587 aa23.1■■□□□ 1.29
COLCA2-203ENST00000528846 KIAA1211Q6ZU35 1233 aa23.1■■□□□ 1.29
COLCA2-203ENST00000528846 PNMA2Q9UL42 364 aa23.1■■□□□ 1.29
COLCA2-203ENST00000528846 TIMP1P01033 207 aa23.09■■□□□ 1.29
COLCA2-203ENST00000528846 GOLGA8HP0CJ92 632 aa23.09■■□□□ 1.29
COLCA2-203ENST00000528846 PTGS1P23219 599 aa23.09■■□□□ 1.29
COLCA2-203ENST00000528846 CALML3P27482 149 aa23.09■■□□□ 1.29
COLCA2-203ENST00000528846 FSCN1Q16658 493 aaKnown RBP23.09■■□□□ 1.29
COLCA2-203ENST00000528846 CCDC178Q5BJE1 867 aa23.09■■□□□ 1.29
COLCA2-203ENST00000528846 ZNF697Q5TEC3 545 aa23.09■■□□□ 1.29
COLCA2-203ENST00000528846 CXCL17Q6UXB2 119 aa23.09■■□□□ 1.29
COLCA2-203ENST00000528846 IQCA1Q86XH1 822 aa23.09■■□□□ 1.29
COLCA2-203ENST00000528846 MORC4Q8TE76 937 aa23.09■■□□□ 1.29
COLCA2-203ENST00000528846 CLEC4DQ8WXI8 215 aa23.09■■□□□ 1.29
COLCA2-203ENST00000528846 DSCC1Q9BVC3 393 aa23.09■■□□□ 1.29
COLCA2-203ENST00000528846 VTA1Q9NP79 307 aa23.09■■□□□ 1.29
COLCA2-203ENST00000528846 TBX21Q9UL17 535 aa23.09■■□□□ 1.29
COLCA2-203ENST00000528846 COL6A3P12111 3177 aa23.09■■□□□ 1.29
COLCA2-203ENST00000528846 LTBP2Q14767 1821 aa23.08■■□□□ 1.29
COLCA2-203ENST00000528846 LAMA2P24043 3122 aaKnown RBP23.08■■□□□ 1.29
COLCA2-203ENST00000528846 B4E1Z4 1266 aa23.08■■□□□ 1.29
COLCA2-203ENST00000528846 NT5C2P49902 561 aa23.08■■□□□ 1.29
COLCA2-203ENST00000528846 ALDH5A1P51649 535 aaPredicted RBP23.08■■□□□ 1.29
COLCA2-203ENST00000528846 IMMTQ16891 758 aaKnown RBP23.08■■□□□ 1.29
COLCA2-203ENST00000528846 TMEM63BQ5T3F8 832 aa23.08■■□□□ 1.29
COLCA2-203ENST00000528846 GPATCH4Q5T3I0 446 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms