RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.64■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.64■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 SOWAHBA6NEL2 793 aa20.64■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 TOP1P11387 765 aaKnown RBP20.64■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 VPS53Q5VIR6 699 aa20.64■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 NOL8Q76FK4 1167 aaKnown RBP20.64■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 TLK2Q86UE8 772 aa20.64■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 TMEM199Q8N511 208 aa20.64■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 AP5M1Q9H0R1 490 aa20.64■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 TCP11L1Q9NUJ3 509 aa20.64■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 CYP39A1Q9NYL5 469 aa20.64■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 ADD3Q9UEY8 706 aaKnown RBP20.64■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 LAMA2P24043 3122 aaKnown RBP20.64■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 NMT2O60551 498 aa20.63■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 NT5C2P49902 561 aa20.63■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 EPHB4P54760 987 aa20.63■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 MFAP1P55081 439 aaKnown RBP20.63■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 IQSEC1Q6DN90 963 aa20.63■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 BTNL9Q6UXG8 535 aa20.63■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 FAM126BQ8IXS8 530 aa20.63■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 RANBP17Q9H2T7 1088 aaKnown RBP20.63■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 VTA1Q9NP79 307 aa20.63■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 GNEQ9Y223 722 aaKnown RBP20.63■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 FSCN1Q16658 493 aaKnown RBP20.62■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 PSRC1Q6PGN9 363 aaPredicted RBP20.62■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 CRBNQ96SW2 442 aa20.62■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 LCTP09848 1927 aa20.62■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.61■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 CTAGE5O15320 804 aa20.61■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 FGAP02671 866 aa20.61■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 MUM1L1Q5H9M0 696 aa20.61■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 RRP12Q5JTH9 1297 aaKnown RBP20.61■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 SYDE2Q5VT97 1194 aa20.61■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 NSMFQ6X4W1 530 aa20.61■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 MAFAQ8NHW3 353 aaPredicted RBP20.61■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 MORC4Q8TE76 937 aa20.61■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 TTC14Q96N46 770 aa20.61■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 MPHOSPH6Q99547 160 aaKnown RBP20.61■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 TTYH1Q9H313 450 aaPredicted RBP20.61■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 INCENPQ9NQS7 918 aa20.61■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 MTMR7Q9Y216 660 aa20.61■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 CCDC171Q6TFL3 1326 aa20.6■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 A0A0D9SFI3 127 aa20.6■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 HSPD1P10809 573 aaKnown RBP20.6■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 FOSL2P15408 326 aa20.6■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 SLC43A3Q8NBI5 491 aa20.6■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 CHMP4CQ96CF2 233 aa20.6■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 MTIF3Q9H2K0 278 aaKnown RBP20.6■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 RNF41Q9H4P4 317 aaPredicted RBP20.6■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 ASTN1O14525 1302 aa20.59■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 CUL9Q8IWT3 2517 aa20.59■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 CD4P01730 458 aa20.59■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 DNAJB2P25686 324 aa20.59■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 IRX5P78411 483 aaPredicted RBP20.59■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 BEX3Q00994 111 aa20.59■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 MFSD6Q6ZSS7 791 aa20.59■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 MYLIPQ8WY64 445 aa20.59■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 FAM227BQ96M60 508 aa20.59■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 TMEM47Q9BQJ4 181 aa20.59■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.59■□□□□ 0.891e-10■□□□□ 8.5
CKLF-CMTM1-202ENST00000527845 LAMA4Q16363 1823 aa20.58■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 TRIM6-TRIM34B2RNG4 842 aa20.58■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 SMPD1P17405 629 aa20.58■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 SNAP25P60880 206 aa20.58■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 AKNAD1Q5T1N1 836 aa20.58■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 TAPT1Q6NXT6 567 aa20.58■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 CXCL17Q6UXB2 119 aa20.58■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 RASGRP2Q7LDG7 609 aa20.58■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 FBXO16Q8IX29 292 aaPredicted RBP20.58■□□□□ 0.89
CKLF-CMTM1-202ENST00000527845 WDR19Q8NEZ3 1342 aa20.57■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 DYNC1LI2O43237 492 aaPredicted RBP20.57■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 PDHBP11177 359 aa20.57■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 ALDH5A1P51649 535 aaPredicted RBP20.57■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 NMIQ13287 307 aaPredicted RBP20.57■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 ITGA7Q13683 1181 aa20.57■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 TMEM240Q5SV17 173 aa20.57■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 PPP1R12CQ9BZL4 782 aa20.57■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 POLR3EQ9NVU0 708 aa20.57■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 PTPDC1A2A3K4 754 aa20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 B4DLN1 442 aa20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 CSF2RAP15509 400 aa20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 SLC16A2P36021 539 aa20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 MRPL12P52815 198 aaKnown RBP20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 BAATQ14032 418 aaPredicted RBP20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 DUSP28Q4G0W2 176 aa20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 CCDC178Q5BJE1 867 aa20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 GPATCH4Q5T3I0 446 aaKnown RBP20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 RASIP1Q5U651 963 aa20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 TTBK2Q6IQ55 1244 aa20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 KIAA1211Q6ZU35 1233 aa20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 EEPD1Q7L9B9 569 aa20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 ZNF589Q86UQ0 364 aaPredicted RBP20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 ESR2Q92731 530 aa20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 TIFAQ96CG3 184 aa20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 MAF1Q9H063 256 aa20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 HIPK3Q9H422 1215 aa20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 RWDD1Q9H446 243 aaPredicted RBP20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 IL23AQ9NPF7 189 aa20.56■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 FRMPD2Q68DX3 1309 aaPredicted RBP20.55■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 A0A0C4DFX4 3053 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms