RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 SMPD1P17405 629 aa21.06■□□□□ 0.96
PVT1-220ENST00000524165 SLC4A3P48751 1232 aa21.06■□□□□ 0.96
PVT1-220ENST00000524165 CCDC8Q9H0W5 538 aaPredicted RBP21.06■□□□□ 0.96
PVT1-220ENST00000524165 ASB14A6NK59 587 aa21.05■□□□□ 0.96
PVT1-220ENST00000524165 IQSEC1Q6DN90 963 aa21.05■□□□□ 0.96
PVT1-220ENST00000524165 HFE2Q6ZVN8 426 aa21.05■□□□□ 0.96
PVT1-220ENST00000524165 C16orf86Q6ZW13 317 aa21.05■□□□□ 0.96
PVT1-220ENST00000524165 FAM133AQ8N9E0 248 aa21.05■□□□□ 0.96
PVT1-220ENST00000524165 FTOQ9C0B1 505 aaKnown RBP eCLIP21.05■□□□□ 0.96
PVT1-220ENST00000524165 SUGCTQ9HAC7 445 aa21.05■□□□□ 0.96
PVT1-220ENST00000524165 CTDP1Q9Y5B0 961 aaPredicted RBP21.05■□□□□ 0.96
PVT1-220ENST00000524165 LCHNA4D1U4 455 aa21.04■□□□□ 0.96
PVT1-220ENST00000524165 IQCF3P0C7M6 154 aa21.04■□□□□ 0.96
PVT1-220ENST00000524165 PDE6AP16499 860 aa21.04■□□□□ 0.96
PVT1-220ENST00000524165 OAZ1P54368 228 aa21.04■□□□□ 0.96
PVT1-220ENST00000524165 CNTN2Q02246 1040 aa21.04■□□□□ 0.96
PVT1-220ENST00000524165 TTF1Q15361 905 aaPredicted RBP21.04■□□□□ 0.96
PVT1-220ENST00000524165 SLC9C2Q5TAH2 1124 aa21.04■□□□□ 0.96
PVT1-220ENST00000524165 LCORLQ8N3X6 602 aa21.04■□□□□ 0.96
PVT1-220ENST00000524165 SSH3Q8TE77 659 aa21.04■□□□□ 0.96
PVT1-220ENST00000524165 EAF2Q96CJ1 260 aaPredicted RBP21.04■□□□□ 0.96
PVT1-220ENST00000524165 PHOX2BQ99453 314 aa21.04■□□□□ 0.96
PVT1-220ENST00000524165 NUP88Q99567 741 aaPredicted RBP21.04■□□□□ 0.96
PVT1-220ENST00000524165 SLC38A10Q9HBR0 1119 aa21.04■□□□□ 0.96
PVT1-220ENST00000524165 RAVER2Q9HCJ3 691 aaKnown RBP21.04■□□□□ 0.96
PVT1-220ENST00000524165 ATP8A2Q9NTI2 1148 aa21.04■□□□□ 0.96
PVT1-220ENST00000524165 TRIP12Q14669 1992 aaPredicted RBP21.04■□□□□ 0.96
PVT1-220ENST00000524165 SCN10AQ9Y5Y9 1956 aa21.04■□□□□ 0.96
PVT1-220ENST00000524165 SURF6O75683 361 aaKnown RBP21.03■□□□□ 0.96
PVT1-220ENST00000524165 KCNJ6P48051 423 aa21.03■□□□□ 0.96
PVT1-220ENST00000524165 ERVK-21P61565 698 aa21.03■□□□□ 0.96
PVT1-220ENST00000524165 C12orf60Q5U649 245 aa21.03■□□□□ 0.96
PVT1-220ENST00000524165 RETREG2Q8NC44 543 aa21.03■□□□□ 0.96
PVT1-220ENST00000524165 NEK9Q8TD19 979 aa21.03■□□□□ 0.96
PVT1-220ENST00000524165 PRKAG3Q9UGI9 489 aa21.03■□□□□ 0.96
PVT1-220ENST00000524165 PTGS1P23219 599 aa21.02■□□□□ 0.96
PVT1-220ENST00000524165 TGS1Q96RS0 853 aaKnown RBP21.02■□□□□ 0.96
PVT1-220ENST00000524165 POLR3EQ9NVU0 708 aa21.02■□□□□ 0.96
PVT1-220ENST00000524165 SPTBN4Q9H254 2564 aa21.02■□□□□ 0.96
PVT1-220ENST00000524165 MYH4Q9Y623 1939 aa21.02■□□□□ 0.95
PVT1-220ENST00000524165 ZNF532Q9HCE3 1301 aa21.02■□□□□ 0.95
PVT1-220ENST00000524165 F5H6K3 240 aa21.01■□□□□ 0.95
PVT1-220ENST00000524165 KLRC3Q07444 240 aa21.01■□□□□ 0.95
PVT1-220ENST00000524165 TAPT1Q6NXT6 567 aa21.01■□□□□ 0.95
PVT1-220ENST00000524165 AMOTL1Q8IY63 956 aa21.01■□□□□ 0.95
PVT1-220ENST00000524165 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.01■□□□□ 0.95
PVT1-220ENST00000524165 ZBED2Q9BTP6 218 aa21.01■□□□□ 0.95
PVT1-220ENST00000524165 FAM50BQ9Y247 325 aa21.01■□□□□ 0.95
PVT1-220ENST00000524165 NOP58Q9Y2X3 529 aaKnown RBP21.01■□□□□ 0.95
PVT1-220ENST00000524165 TCRBV5S4A2TA0A5A2 114 aa21■□□□□ 0.95
PVT1-220ENST00000524165 SOWAHBA6NEL2 793 aa21■□□□□ 0.95
PVT1-220ENST00000524165 C19orf67A6NJJ6 358 aa21■□□□□ 0.95
PVT1-220ENST00000524165 USP17L12C9JPN9 530 aa21■□□□□ 0.95
PVT1-220ENST00000524165 USP17L21D6R901 530 aa21■□□□□ 0.95
PVT1-220ENST00000524165 WDR5P61964 334 aaKnown RBP21■□□□□ 0.95
PVT1-220ENST00000524165 PURAQ00577 322 aaKnown RBP21■□□□□ 0.95
PVT1-220ENST00000524165 ZP2Q05996 745 aa21■□□□□ 0.95
PVT1-220ENST00000524165 TRMT2AQ8IZ69 625 aaKnown RBP21■□□□□ 0.95
PVT1-220ENST00000524165 ANKS1AQ92625 1134 aa21■□□□□ 0.95
PVT1-220ENST00000524165 KIFC2Q96AC6 838 aa21■□□□□ 0.95
PVT1-220ENST00000524165 UPF3BQ9BZI7 483 aaKnown RBP21■□□□□ 0.95
PVT1-220ENST00000524165 ACAD9Q9H845 621 aa21■□□□□ 0.95
PVT1-220ENST00000524165 PDGFCQ9NRA1 345 aa21■□□□□ 0.95
PVT1-220ENST00000524165 TECTAO75443 2155 aa20.99■□□□□ 0.95
PVT1-220ENST00000524165 NDUFB10O96000 172 aa20.99■□□□□ 0.95
PVT1-220ENST00000524165 PTPN5P54829 565 aa20.99■□□□□ 0.95
PVT1-220ENST00000524165 ATP8B2P98198 1209 aa20.99■□□□□ 0.95
PVT1-220ENST00000524165 BFSP2Q13515 415 aa20.99■□□□□ 0.95
PVT1-220ENST00000524165 LRRFIP1Q32MZ4 808 aaKnown RBP20.99■□□□□ 0.95
PVT1-220ENST00000524165 RAD9AQ99638 391 aa20.99■□□□□ 0.95
PVT1-220ENST00000524165 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.99■□□□□ 0.95
PVT1-220ENST00000524165 A1CFQ9NQ94 594 aaKnown RBP20.99■□□□□ 0.95
PVT1-220ENST00000524165 NYAP2Q9P242 653 aa20.99■□□□□ 0.95
PVT1-220ENST00000524165 MTUS1Q9ULD2 1270 aa20.99■□□□□ 0.95
PVT1-220ENST00000524165 CYP2D7A0A087X1C5 515 aa20.98■□□□□ 0.95
PVT1-220ENST00000524165 PRSS33Q8NF86 280 aa20.98■□□□□ 0.95
PVT1-220ENST00000524165 PRRX2Q99811 253 aa20.98■□□□□ 0.95
PVT1-220ENST00000524165 ARMT1Q9H993 441 aa20.98■□□□□ 0.95
PVT1-220ENST00000524165 FEM1BQ9UK73 627 aa20.98■□□□□ 0.95
PVT1-220ENST00000524165 COG6Q9Y2V7 657 aa20.98■□□□□ 0.95
PVT1-220ENST00000524165 LINC01553A4QN01 128 aa20.97■□□□□ 0.95
PVT1-220ENST00000524165 ANP32CO43423 234 aa20.97■□□□□ 0.95
PVT1-220ENST00000524165 PRKAB2O43741 272 aa20.97■□□□□ 0.95
PVT1-220ENST00000524165 GJB5O95377 273 aa20.97■□□□□ 0.95
PVT1-220ENST00000524165 FDX1P10109 184 aa20.97■□□□□ 0.95
PVT1-220ENST00000524165 RARSP54136 660 aaKnown RBP20.97■□□□□ 0.95
PVT1-220ENST00000524165 DUSP28Q4G0W2 176 aa20.97■□□□□ 0.95
PVT1-220ENST00000524165 TMEM63BQ5T3F8 832 aa20.97■□□□□ 0.95
PVT1-220ENST00000524165 NFRKBQ6P4R8 1299 aa20.97■□□□□ 0.95
PVT1-220ENST00000524165 ADHFE1Q8IWW8 467 aa20.97■□□□□ 0.95
PVT1-220ENST00000524165 MTG1Q9BT17 334 aaPredicted RBP20.97■□□□□ 0.95
PVT1-220ENST00000524165 VTA1Q9NP79 307 aa20.97■□□□□ 0.95
PVT1-220ENST00000524165 HOMER2Q9NSB8 354 aa20.97■□□□□ 0.95
PVT1-220ENST00000524165 CTNNA3Q9UI47 895 aa20.97■□□□□ 0.95
PVT1-220ENST00000524165 H3BQ06 376 aaPredicted RBP20.96■□□□□ 0.95
PVT1-220ENST00000524165 CPT1AP50416 773 aa20.96■□□□□ 0.95
PVT1-220ENST00000524165 PTPN11Q06124 597 aaPredicted RBP20.96■□□□□ 0.95
PVT1-220ENST00000524165 FAM47CQ5HY64 1035 aa20.96■□□□□ 0.95
PVT1-220ENST00000524165 TMCO2Q7Z6W1 182 aaPredicted RBP20.96■□□□□ 0.95
PVT1-220ENST00000524165 FBXO16Q8IX29 292 aaPredicted RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms