RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 CCDC122Q5T0U0 273 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 NME9Q86XW9 330 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 ARFGAP2Q8N6H7 521 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 SPATA4Q8NEY3 305 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 FSD1Q9BTV5 496 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 PHACTR1Q9C0D0 580 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 GJB4Q9NTQ9 266 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 DACH1Q9UI36 760 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 ADAMTSL3P82987 1691 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 ARHGAP23Q9P227 1491 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-217ENST00000522117 WDR17Q8IZU2 1322 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 ANO9A1A5B4 782 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 PHF20L1A8MW92 1017 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 CREB3O43889 395 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 PEX14O75381 377 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 PTPAQ15257 358 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 SGSM1Q2NKQ1 1148 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 CDKAL1Q5VV42 579 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 DPY19L2Q6NUT2 758 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 MAEAQ7L5Y9 396 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 ARMC9Q7Z3E5 817 aa13.32□□□□□ -0.28
SPIDR-217ENST00000522117 ELOA2Q8IYF1 753 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-217ENST00000522117 TAF1DQ9H5J8 278 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-217ENST00000522117 NRKQ7Z2Y5 1582 aa13.31□□□□□ -0.28
SPIDR-217ENST00000522117 SLIT1O75093 1534 aa13.31□□□□□ -0.28
SPIDR-217ENST00000522117 GOLGA6L10A6NI86 522 aa13.31□□□□□ -0.28
SPIDR-217ENST00000522117 IFIT3O14879 490 aaKnown RBP13.31□□□□□ -0.28
SPIDR-217ENST00000522117 PPP6R2O75170 966 aa13.31□□□□□ -0.28
SPIDR-217ENST00000522117 KIF5BP33176 963 aa13.31□□□□□ -0.28
SPIDR-217ENST00000522117 EXOSC10Q01780 885 aaKnown RBP13.31□□□□□ -0.28
SPIDR-217ENST00000522117 DHX32Q7L7V1 743 aaKnown RBP13.31□□□□□ -0.28
SPIDR-217ENST00000522117 TSPYL4Q9UJ04 414 aa13.31□□□□□ -0.28
SPIDR-217ENST00000522117 KCNH3Q9ULD8 1083 aa13.31□□□□□ -0.28
SPIDR-217ENST00000522117 AGAP1Q9UPQ3 857 aa13.31□□□□□ -0.28
SPIDR-217ENST00000522117 LAMA4Q16363 1823 aa13.31□□□□□ -0.28
SPIDR-217ENST00000522117 NQO1P15559 274 aaKnown RBP13.31□□□□□ -0.28
SPIDR-217ENST00000522117 ALDH5A1P51649 535 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-217ENST00000522117 KCNJ2P63252 427 aa13.31□□□□□ -0.28
SPIDR-217ENST00000522117 KIF23Q02241 960 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-217ENST00000522117 DYNC1I2Q13409 638 aaKnown RBP13.31□□□□□ -0.28
SPIDR-217ENST00000522117 ZNF662Q6ZS27 426 aa13.31□□□□□ -0.28
SPIDR-217ENST00000522117 SEC31BQ9NQW1 1179 aa13.31□□□□□ -0.28
SPIDR-217ENST00000522117 CNOT8Q9UFF9 292 aaKnown RBP13.31□□□□□ -0.28
SPIDR-217ENST00000522117 MAPK8IP1Q9UQF2 711 aa13.31□□□□□ -0.28
SPIDR-217ENST00000522117 CEP170BQ9Y4F5 1589 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-217ENST00000522117 RCCD1A6NED2 376 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 NAT2P11245 290 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 ERCC5P28715 1186 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-217ENST00000522117 CARSP49589 748 aaKnown RBP13.3□□□□□ -0.28
SPIDR-217ENST00000522117 POSTNQ15063 836 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 MAIP1Q8WWC4 291 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 JADE2Q9NQC1 790 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 SYNPO2Q9UMS6 1093 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 CEP131Q9UPN4 1083 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 A8MUI8 341 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 IPO5O00410 1097 aaKnown RBP13.3□□□□□ -0.28
SPIDR-217ENST00000522117 ORC4O43929 436 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 IDEP14735 1019 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 MATR3P43243 847 aaKnown RBP eCLIP13.3□□□□□ -0.282e-6■■■■■ 27.8
SPIDR-217ENST00000522117 MRPS35P82673 323 aaKnown RBP13.3□□□□□ -0.28
SPIDR-217ENST00000522117 SPATA1Q5VX52 437 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 AACSQ86V21 672 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 ANKRD27Q96NW4 1050 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 MOV10L1Q9BXT6 1211 aaKnown RBP13.3□□□□□ -0.28
SPIDR-217ENST00000522117 NFU1Q9UMS0 254 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 SNX12Q9UMY4 172 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 TBX22Q9Y458 520 aa13.3□□□□□ -0.28
SPIDR-217ENST00000522117 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-217ENST00000522117 ATP2A2P16615 1042 aaKnown RBP13.29□□□□□ -0.28
SPIDR-217ENST00000522117 IFT43Q96FT9 208 aa13.29□□□□□ -0.28
SPIDR-217ENST00000522117 ZNF274Q96GC6 653 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-217ENST00000522117 LACRTQ9GZZ8 138 aa13.29□□□□□ -0.28
SPIDR-217ENST00000522117 GPBP1L1Q9HC44 474 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-217ENST00000522117 GDF3Q9NR23 364 aa13.29□□□□□ -0.28
SPIDR-217ENST00000522117 IQSEC3Q9UPP2 1182 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-217ENST00000522117 SUGT1Q9Y2Z0 365 aa13.29□□□□□ -0.28
SPIDR-217ENST00000522117 CTDP1Q9Y5B0 961 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-217ENST00000522117 KRT9P35527 623 aa13.29□□□□□ -0.28
SPIDR-217ENST00000522117 VAV2P52735 878 aa13.29□□□□□ -0.28
SPIDR-217ENST00000522117 IFI16Q16666 785 aaKnown RBP13.29□□□□□ -0.28
SPIDR-217ENST00000522117 TRIM68Q6AZZ1 485 aa13.29□□□□□ -0.28
SPIDR-217ENST00000522117 FNBP4Q8N3X1 1017 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-217ENST00000522117 OGFOD1Q8N543 542 aa13.29□□□□□ -0.28
SPIDR-217ENST00000522117 MIPOL1Q8TD10 442 aa13.29□□□□□ -0.28
SPIDR-217ENST00000522117 NUP88Q99567 741 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-217ENST00000522117 IQCGQ9H095 443 aaKnown RBP13.29□□□□□ -0.28
SPIDR-217ENST00000522117 AATFQ9NY61 560 aaKnown RBP eCLIP13.29□□□□□ -0.28
SPIDR-217ENST00000522117 SMARCAL1Q9NZC9 954 aa13.29□□□□□ -0.28
SPIDR-217ENST00000522117 PLAAQ9Y263 795 aa13.29□□□□□ -0.28
SPIDR-217ENST00000522117 NCAPD2Q15021 1401 aa13.29□□□□□ -0.28
SPIDR-217ENST00000522117 DIP2AQ14689 1571 aa13.29□□□□□ -0.28
SPIDR-217ENST00000522117 LGR5O75473 907 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 SP100P23497 879 aaPredicted RBP13.28□□□□□ -0.28
SPIDR-217ENST00000522117 POLE2P56282 527 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 RNF220Q5VTB9 566 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 CPLX4Q7Z7G2 160 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 TTC30AQ86WT1 665 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 ANKLE2Q86XL3 938 aa13.28□□□□□ -0.28
SPIDR-217ENST00000522117 CCDC197Q8NCU1 140 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms