RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 ITIH3Q06033 890 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 AGAP9Q5VTM2 703 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 KLC3Q6P597 504 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 NLRP14Q86W24 1093 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 APPBP2Q92624 585 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 GFM2Q969S9 779 aaKnown RBP11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 GDAP1L1Q96MZ0 367 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 WDR24Q96S15 920 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 ZNF304Q9HCX3 659 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 NR2E3Q9Y5X4 410 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 SQORQ9Y6N5 450 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 PZPP20742 1482 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 EIF4G3O43432 1585 aaKnown RBP11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 TUBGCP6Q96RT7 1819 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 SPDYE5A6NIY4 337 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 PFKFB2O60825 505 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 DIAPH2O60879 1101 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 ATP6V1C1P21283 382 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 IBSPP21815 317 aaPredicted RBP11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 USP46P62068 366 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 KLC1Q07866 573 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 CFAP100Q494V2 611 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 PPP4R3AQ6IN85 833 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 CCSAPQ6IQ19 270 aaPredicted RBP11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 IRGCQ6NXR0 463 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 SLC2A7Q6PXP3 512 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 LURAP1LQ8IV03 231 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 CCT8L2Q96SF2 557 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 DHX36Q9H2U1 1008 aaKnown RBP11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 ACADSP16219 412 aa11.91□□□□□ -0.5
PDLIM5-210ENST00000508216 IL4RP24394 825 aa11.91□□□□□ -0.5
PDLIM5-210ENST00000508216 KRT85P78386 507 aa11.91□□□□□ -0.5
PDLIM5-210ENST00000508216 WTAPQ15007 396 aa11.91□□□□□ -0.5
PDLIM5-210ENST00000508216 DHX40Q8IX18 779 aaKnown RBP11.91□□□□□ -0.5
PDLIM5-210ENST00000508216 NAA15Q9BXJ9 866 aaKnown RBP11.91□□□□□ -0.5
PDLIM5-210ENST00000508216 SCAND2PQ9GZW5 306 aaPredicted RBP11.91□□□□□ -0.5
PDLIM5-210ENST00000508216 PARVGQ9HBI0 331 aa11.91□□□□□ -0.5
PDLIM5-210ENST00000508216 AS3MTQ9HBK9 375 aa11.91□□□□□ -0.5
PDLIM5-210ENST00000508216 SEPT10Q9P0V9 454 aa11.91□□□□□ -0.5
PDLIM5-210ENST00000508216 BAIAP2L1Q9UHR4 511 aa11.91□□□□□ -0.5
PDLIM5-210ENST00000508216 CASZ1Q86V15 1759 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 GRIN2BQ13224 1484 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 CTAGE15A4D2H0 777 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 STRNO43815 780 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 GIGYF1O75420 1035 aaPredicted RBP11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 EIF2S1P05198 315 aaKnown RBP11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 CTAGE8P0CG41 777 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 MSLNQ13421 630 aaPredicted RBP11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 PDCD4Q53EL6 469 aaKnown RBP11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 NCAPH2Q6IBW4 605 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 DAAM2Q86T65 1068 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 CTAGE6Q86UF2 777 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 RAB11FIP4Q86YS3 637 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 CTAGE4Q8IX94 777 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 CCDC110Q8TBZ0 833 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 AGAP11Q8TF27 550 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 CCT6BQ92526 530 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 TUBGCP5Q96RT8 1024 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 EHD4Q9H223 541 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 PARVBQ9HBI1 364 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 TNNQ9UQP3 1299 aa11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 NOSIPQ9Y314 301 aaKnown RBP11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 LUC7L2Q9Y383 392 aaKnown RBP11.9□□□□□ -0.5
PDLIM5-210ENST00000508216 PABPN1LA6NDY0 278 aaKnown RBP11.9□□□□□ -0.51
PDLIM5-210ENST00000508216 HNRNPCP07910 306 aaKnown RBP eCLIP11.9□□□□□ -0.51
PDLIM5-210ENST00000508216 ERCC5P28715 1186 aaPredicted RBP11.9□□□□□ -0.51
PDLIM5-210ENST00000508216 PDE6BP35913 854 aa11.9□□□□□ -0.51
PDLIM5-210ENST00000508216 POLE2P56282 527 aa11.9□□□□□ -0.51
PDLIM5-210ENST00000508216 PCNX4Q63HM2 1172 aa11.9□□□□□ -0.51
PDLIM5-210ENST00000508216 NLRP9Q7RTR0 991 aa11.9□□□□□ -0.51
PDLIM5-210ENST00000508216 WDR75Q8IWA0 830 aaKnown RBP11.9□□□□□ -0.51
PDLIM5-210ENST00000508216 CLMNQ96JQ2 1002 aa11.9□□□□□ -0.51
PDLIM5-210ENST00000508216 C8orf76Q96K31 380 aa11.9□□□□□ -0.51
PDLIM5-210ENST00000508216 SYT15Q9BQS2 421 aa11.9□□□□□ -0.51
PDLIM5-210ENST00000508216 PDP2Q9P2J9 529 aa11.9□□□□□ -0.51
PDLIM5-210ENST00000508216 GTF3C4Q9UKN8 822 aa11.9□□□□□ -0.51
PDLIM5-210ENST00000508216 CHD1O14646 1710 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 CHD2O14647 1828 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 RIMBP2O15034 1052 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 STX10O60499 249 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 RXRBP28702 533 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 USP14P54578 494 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 TAF11Q15544 211 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 GLE1Q53GS7 698 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 GRAMD4Q6IC98 578 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 CCDC148Q8NFR7 591 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 GIPC2Q8TF65 315 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 EPSTI1Q96J88 318 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 CARD9Q9H257 536 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 ZSWIM6Q9HCJ5 1215 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 FKBP14Q9NWM8 211 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 DACT1Q9NYF0 836 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 SLC12A4Q9UP95 1085 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 ZNF652Q9Y2D9 606 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 FAM32AQ9Y421 112 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 EMILIN1Q9Y6C2 1016 aa11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 URB2Q14146 1524 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-210ENST00000508216 SHPRHQ149N8 1683 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 KANSL1LA0AUZ9 987 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms