RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 TDRD12Q587J7 1177 aaKnown RBP16.47■□□□□ 0.23
SMTN-219ENST00000493335 RNF187Q5TA31 235 aaPredicted RBP16.47■□□□□ 0.23
SMTN-219ENST00000493335 SAMD1Q6SPF0 538 aaPredicted RBP16.47■□□□□ 0.23
SMTN-219ENST00000493335 HEATR3Q7Z4Q2 680 aa16.47■□□□□ 0.23
SMTN-219ENST00000493335 SPATA4Q8NEY3 305 aa16.47■□□□□ 0.23
SMTN-219ENST00000493335 RBM28Q9NW13 759 aaKnown RBP16.47■□□□□ 0.23
SMTN-219ENST00000493335 MYO5AQ9Y4I1 1855 aaKnown RBP16.47■□□□□ 0.23
SMTN-219ENST00000493335 PPFIA1Q13136 1202 aa16.46■□□□□ 0.23
SMTN-219ENST00000493335 TMC4Q7Z404 712 aa16.46■□□□□ 0.23
SMTN-219ENST00000493335 TSEN2Q8NCE0 465 aaKnown RBP16.46■□□□□ 0.23
SMTN-219ENST00000493335 KAT2BQ92831 832 aa16.46■□□□□ 0.23
SMTN-219ENST00000493335 RPGRIP1Q96KN7 1286 aa16.46■□□□□ 0.23
SMTN-219ENST00000493335 CAPN7Q9Y6W3 813 aa16.46■□□□□ 0.23
SMTN-219ENST00000493335 FAM205AQ6ZU69 1335 aa16.46■□□□□ 0.23
SMTN-219ENST00000493335 ZC3H4Q9UPT8 1303 aaKnown RBP16.46■□□□□ 0.23
SMTN-219ENST00000493335 TARSL2A2RTX5 802 aaKnown RBP16.46■□□□□ 0.23
SMTN-219ENST00000493335 ZSCAN5CA6NGD5 496 aaPredicted RBP16.46■□□□□ 0.23
SMTN-219ENST00000493335 CYP2D6P10635 497 aa16.46■□□□□ 0.23
SMTN-219ENST00000493335 EEF1GP26641 437 aaKnown RBP16.46■□□□□ 0.23
SMTN-219ENST00000493335 PAFAH1B1P43034 410 aa16.46■□□□□ 0.23
SMTN-219ENST00000493335 ANKRD40Q6AI12 368 aa16.46■□□□□ 0.23
SMTN-219ENST00000493335 SLC39A2Q9NP94 309 aa16.46■□□□□ 0.23
SMTN-219ENST00000493335 DONSONQ9NYP3 566 aa16.46■□□□□ 0.23
SMTN-219ENST00000493335 KIAA0754O94854 1291 aa16.46■□□□□ 0.22
SMTN-219ENST00000493335 ARID5AQ03989 594 aa16.46■□□□□ 0.22
SMTN-219ENST00000493335 C8orf74Q6P047 294 aa16.46■□□□□ 0.22
SMTN-219ENST00000493335 RRAGAQ7L523 313 aa16.46■□□□□ 0.22
SMTN-219ENST00000493335 SNX12Q9UMY4 172 aa16.46■□□□□ 0.22
SMTN-219ENST00000493335 CNTNAP5Q8WYK1 1306 aa16.46■□□□□ 0.22
SMTN-219ENST00000493335 ZNF263O14978 683 aa16.45■□□□□ 0.22
SMTN-219ENST00000493335 ZBED6P86452 979 aa16.45■□□□□ 0.22
SMTN-219ENST00000493335 STK4Q13043 487 aa16.45■□□□□ 0.22
SMTN-219ENST00000493335 SUSD4Q5VX71 490 aa16.45■□□□□ 0.22
SMTN-219ENST00000493335 BLIDQ8IZY5 108 aa16.45■□□□□ 0.22
SMTN-219ENST00000493335 ZNF507Q8TCN5 953 aa16.45■□□□□ 0.22
SMTN-219ENST00000493335 TNFRSF25Q93038 417 aa16.45■□□□□ 0.22
SMTN-219ENST00000493335 CPVLQ9H3G5 476 aa16.45■□□□□ 0.22
SMTN-219ENST00000493335 PDS5AQ29RF7 1337 aaKnown RBP16.45■□□□□ 0.22
SMTN-219ENST00000493335 PNPLA7Q6ZV29 1317 aa16.45■□□□□ 0.22
SMTN-219ENST00000493335 EIF4A3P38919 411 aaKnown RBP16.45■□□□□ 0.22
SMTN-219ENST00000493335 VAV2P52735 878 aa16.45■□□□□ 0.22
SMTN-219ENST00000493335 CHRNDQ07001 517 aa16.45■□□□□ 0.22
SMTN-219ENST00000493335 NAALADL2Q58DX5 795 aa16.45■□□□□ 0.22
SMTN-219ENST00000493335 MMS22LQ6ZRQ5 1243 aa16.45■□□□□ 0.22
SMTN-219ENST00000493335 TNS3Q68CZ2 1445 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 FAM170AA1A519 330 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 SRGNP10124 158 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 HPDP32754 393 aaPredicted RBP16.44■□□□□ 0.22
SMTN-219ENST00000493335 GSCP56915 257 aaPredicted RBP16.44■□□□□ 0.22
SMTN-219ENST00000493335 RASSF7Q02833 373 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 LETM2Q2VYF4 491 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 CREG2Q8IUH2 290 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 TRIM58Q8NG06 486 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 EPHB6O15197 1021 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 EIF3HO15372 352 aaKnown RBP eCLIP16.44■□□□□ 0.22
SMTN-219ENST00000493335 LONP1P36776 959 aaKnown RBP16.44■□□□□ 0.22
SMTN-219ENST00000493335 APBA1Q02410 837 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 DYMQ7RTS9 669 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 CCDC91Q7Z6B0 441 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 CCDC47Q96A33 483 aaKnown RBP16.44■□□□□ 0.22
SMTN-219ENST00000493335 CCDC43Q96MW1 224 aaKnown RBP16.44■□□□□ 0.22
SMTN-219ENST00000493335 ALS2CR12Q96Q35 445 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 OSBPL9Q96SU4 736 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 PYM1Q9BRP8 204 aaKnown RBP16.44■□□□□ 0.22
SMTN-219ENST00000493335 NLRC4Q9NPP4 1024 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 NFU1Q9UMS0 254 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 PCDHA13Q9Y5I0 950 aa16.44■□□□□ 0.22
SMTN-219ENST00000493335 A0A1W2PQC6 194 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 OPA1O60313 960 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 CALM1P0DP23 149 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 CALM2P0DP24 149 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 CALM3P0DP25 149 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 PLCG1P19174 1290 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 MAGEA1P43355 309 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 KIF11P52732 1056 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 GUCY1A3Q02108 690 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 PPP2R5BQ15173 497 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 TTI2Q6NXR4 508 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 CACNA2D4Q7Z3S7 1137 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 AMOTL1Q8IY63 956 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 STAG2Q8N3U4 1231 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 OTUD6BQ8N6M0 293 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 THAP9Q9H5L6 903 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 RASSF10A6NK89 507 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 MYO1FO00160 1098 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 GUCY2DQ02846 1103 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 SUGP1Q8IWZ8 645 aaKnown RBP16.43■□□□□ 0.22
SMTN-219ENST00000493335 DUSP9Q99956 384 aaKnown RBP16.43■□□□□ 0.22
SMTN-219ENST00000493335 RBM12Q9NTZ6 932 aaKnown RBP16.43■□□□□ 0.22
SMTN-219ENST00000493335 PACSIN2Q9UNF0 486 aaPredicted RBP16.43■□□□□ 0.22
SMTN-219ENST00000493335 TJP1Q07157 1748 aa16.43■□□□□ 0.22
SMTN-219ENST00000493335 PHRF1Q9P1Y6 1649 aaKnown RBP16.43■□□□□ 0.22
SMTN-219ENST00000493335 GOLGA8HP0CJ92 632 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 SF3A3Q12874 501 aaKnown RBP eCLIP16.42■□□□□ 0.222e-6■■■■□ 21.8
SMTN-219ENST00000493335 MAATS1Q7Z4T9 603 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 CCDC155Q8N6L0 562 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 AENQ8WTP8 325 aaKnown RBP16.42■□□□□ 0.22
SMTN-219ENST00000493335 P2RX5Q93086 422 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 UIMC1Q96RL1 719 aa16.42■□□□□ 0.22
SMTN-219ENST00000493335 KIF1AQ12756 1690 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms