RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 OR52Z1P0C646 297 aa29.35■■■□□ 2.29
HLA-C-208ENST00000487245 FXR1P51114 621 aaKnown RBP eCLIP29.35■■■□□ 2.29
HLA-C-208ENST00000487245 NEK8Q86SG6 692 aa29.35■■■□□ 2.29
HLA-C-208ENST00000487245 KCNJ18B7U540 433 aa29.34■■■□□ 2.29
HLA-C-208ENST00000487245 KCNJ12Q14500 433 aa29.34■■■□□ 2.29
HLA-C-208ENST00000487245 ADSSL1Q8N142 457 aa29.34■■■□□ 2.29
HLA-C-208ENST00000487245 TMX4Q9H1E5 349 aaPredicted RBP29.34■■■□□ 2.29
HLA-C-208ENST00000487245 C10orf71Q711Q0 1435 aa29.34■■■□□ 2.29
HLA-C-208ENST00000487245 IGKV6D-41A0A0C4DH26 115 aa29.34■■■□□ 2.29
HLA-C-208ENST00000487245 USP17L5A8MUK1 530 aa29.34■■■□□ 2.29
HLA-C-208ENST00000487245 KIF5CO60282 957 aa29.34■■■□□ 2.29
HLA-C-208ENST00000487245 SRGNP10124 158 aa29.34■■■□□ 2.29
HLA-C-208ENST00000487245 PDHBP11177 359 aa29.34■■■□□ 2.29
HLA-C-208ENST00000487245 TERF2Q15554 542 aa29.34■■■□□ 2.29
HLA-C-208ENST00000487245 NAALADL2Q58DX5 795 aa29.34■■■□□ 2.29
HLA-C-208ENST00000487245 CPLX3Q8WVH0 158 aa29.34■■■□□ 2.29
HLA-C-208ENST00000487245 PIGSQ96S52 555 aa29.34■■■□□ 2.29
HLA-C-208ENST00000487245 KBTBD4Q9NVX7 518 aa29.34■■■□□ 2.29
HLA-C-208ENST00000487245 ANKRD31Q8N7Z5 1873 aa29.33■■■□□ 2.29
HLA-C-208ENST00000487245 MYH8P13535 1937 aa29.33■■■□□ 2.29
HLA-C-208ENST00000487245 CDC25AP30304 524 aa29.33■■■□□ 2.29
HLA-C-208ENST00000487245 ABHD10Q9NUJ1 306 aa29.33■■■□□ 2.29
HLA-C-208ENST00000487245 NRXN2Q9P2S2 1712 aa29.32■■■□□ 2.28
HLA-C-208ENST00000487245 PRCPP42785 496 aa29.32■■■□□ 2.28
HLA-C-208ENST00000487245 STIM1Q13586 685 aa29.32■■■□□ 2.28
HLA-C-208ENST00000487245 HHIPL2Q6UWX4 724 aa29.32■■■□□ 2.28
HLA-C-208ENST00000487245 PROM2Q8N271 834 aa29.32■■■□□ 2.28
HLA-C-208ENST00000487245 GOLGA1Q92805 767 aa29.32■■■□□ 2.28
HLA-C-208ENST00000487245 SNHG28P0DPA3 235 aa29.31■■■□□ 2.28
HLA-C-208ENST00000487245 PDE6BP35913 854 aa29.31■■■□□ 2.28
HLA-C-208ENST00000487245 CCT6AP40227 531 aaKnown RBP29.31■■■□□ 2.28
HLA-C-208ENST00000487245 PICALMQ13492 652 aa29.31■■■□□ 2.28
HLA-C-208ENST00000487245 REXO1Q8N1G1 1221 aaKnown RBP29.31■■■□□ 2.28
HLA-C-208ENST00000487245 CCDC47Q96A33 483 aaKnown RBP29.31■■■□□ 2.28
HLA-C-208ENST00000487245 CPVLQ9H3G5 476 aa29.31■■■□□ 2.28
HLA-C-208ENST00000487245 VAT1LQ9HCJ6 419 aa29.31■■■□□ 2.28
HLA-C-208ENST00000487245 USP40Q9NVE5 1235 aa29.31■■■□□ 2.28
HLA-C-208ENST00000487245 CCNT1O60563 726 aaKnown RBP29.31■■■□□ 2.28
HLA-C-208ENST00000487245 TUBB4BP68371 445 aa29.31■■■□□ 2.28
HLA-C-208ENST00000487245 LETM2Q2VYF4 491 aa29.31■■■□□ 2.28
HLA-C-208ENST00000487245 JAKMIP3Q5VZ66 844 aa29.31■■■□□ 2.28
HLA-C-208ENST00000487245 CYP26C1Q6V0L0 522 aa29.31■■■□□ 2.28
HLA-C-208ENST00000487245 DPP8Q6V1X1 898 aaPredicted RBP29.31■■■□□ 2.28
HLA-C-208ENST00000487245 CABP7Q86V35 215 aa29.31■■■□□ 2.28
HLA-C-208ENST00000487245 MYO1AQ9UBC5 1043 aa29.31■■■□□ 2.28
HLA-C-208ENST00000487245 BRWD3Q6RI45 1802 aa29.3■■■□□ 2.28
HLA-C-208ENST00000487245 THAP9Q9H5L6 903 aa29.3■■■□□ 2.28
HLA-C-208ENST00000487245 TAB2Q9NYJ8 693 aa29.3■■■□□ 2.28
HLA-C-208ENST00000487245 SERPINB13Q9UIV8 391 aa29.3■■■□□ 2.28
HLA-C-208ENST00000487245 GDAQ9Y2T3 454 aa29.3■■■□□ 2.28
HLA-C-208ENST00000487245 A0A1W2PQC6 194 aa29.29■■■□□ 2.28
HLA-C-208ENST00000487245 KLRC4O43908 158 aa29.29■■■□□ 2.28
HLA-C-208ENST00000487245 RHOBTB3O94955 611 aa29.29■■■□□ 2.28
HLA-C-208ENST00000487245 TTLL1O95922 423 aa29.29■■■□□ 2.28
HLA-C-208ENST00000487245 EEF1GP26641 437 aaKnown RBP29.29■■■□□ 2.28
HLA-C-208ENST00000487245 IRF2BP1Q8IU81 584 aa29.29■■■□□ 2.28
HLA-C-208ENST00000487245 CERS5Q8N5B7 392 aa29.29■■■□□ 2.28
HLA-C-208ENST00000487245 FLAD1Q8NFF5 587 aa29.29■■■□□ 2.28
HLA-C-208ENST00000487245 NOC3LQ8WTT2 800 aaKnown RBP29.29■■■□□ 2.28
HLA-C-208ENST00000487245 VPS16Q9H269 839 aa29.29■■■□□ 2.28
HLA-C-208ENST00000487245 CDC23Q9UJX2 597 aa29.29■■■□□ 2.28
HLA-C-208ENST00000487245 AKR1B1P15121 316 aa29.29■■■□□ 2.28
HLA-C-208ENST00000487245 ERVK-24P63145 666 aa29.29■■■□□ 2.28
HLA-C-208ENST00000487245 PPP1R18Q6NYC8 613 aa29.29■■■□□ 2.28
HLA-C-208ENST00000487245 SRGAP1Q7Z6B7 1085 aa29.29■■■□□ 2.28
HLA-C-208ENST00000487245 UBA5Q9GZZ9 404 aa29.29■■■□□ 2.28
HLA-C-208ENST00000487245 LZTFL1Q9NQ48 299 aa29.29■■■□□ 2.28
HLA-C-208ENST00000487245 PP2D1A8MPX8 630 aa29.28■■■□□ 2.28
HLA-C-208ENST00000487245 G3V3G9 751 aa29.28■■■□□ 2.28
HLA-C-208ENST00000487245 HLA-DOAP06340 250 aa29.28■■■□□ 2.28
HLA-C-208ENST00000487245 PPP1R2P41236 205 aa29.28■■■□□ 2.28
HLA-C-208ENST00000487245 PLA2G4AP47712 749 aa29.28■■■□□ 2.28
HLA-C-208ENST00000487245 DCAF8Q5TAQ9 597 aa29.28■■■□□ 2.28
HLA-C-208ENST00000487245 CEP112Q8N8E3 955 aa29.28■■■□□ 2.28
HLA-C-208ENST00000487245 TBCKQ8TEA7 893 aa29.28■■■□□ 2.28
HLA-C-208ENST00000487245 GIMAP8Q8ND71 665 aaPredicted RBP29.27■■■□□ 2.28
HLA-C-208ENST00000487245 TEKT1Q969V4 418 aa29.27■■■□□ 2.28
HLA-C-208ENST00000487245 DDX4Q9NQI0 724 aaKnown RBP29.27■■■□□ 2.28
HLA-C-208ENST00000487245 F8W031 263 aaPredicted RBP29.27■■■□□ 2.28
HLA-C-208ENST00000487245 ADCY7P51828 1080 aa29.27■■■□□ 2.28
HLA-C-208ENST00000487245 AMPD3Q01432 767 aa29.27■■■□□ 2.28
HLA-C-208ENST00000487245 TEX35Q5T0J7 233 aa29.27■■■□□ 2.28
HLA-C-208ENST00000487245 CC2D1AQ6P1N0 951 aaPredicted RBP29.27■■■□□ 2.28
HLA-C-208ENST00000487245 MASTLQ96GX5 879 aa29.27■■■□□ 2.28
HLA-C-208ENST00000487245 IRX2Q9BZI1 471 aaPredicted RBP29.27■■■□□ 2.28
HLA-C-208ENST00000487245 UBXN6Q9BZV1 441 aa29.27■■■□□ 2.28
HLA-C-208ENST00000487245 LGALS16A8MUM7 142 aa29.26■■■□□ 2.27
HLA-C-208ENST00000487245 DHTKD1Q96HY7 919 aaPredicted RBP29.26■■■□□ 2.27
HLA-C-208ENST00000487245 PSMA7O14818 248 aa29.25■■■□□ 2.27
HLA-C-208ENST00000487245 ZNF507Q8TCN5 953 aa29.25■■■□□ 2.27
HLA-C-208ENST00000487245 AKT1S1Q96B36 256 aa29.25■■■□□ 2.27
HLA-C-208ENST00000487245 NUP88Q99567 741 aaPredicted RBP29.25■■■□□ 2.27
HLA-C-208ENST00000487245 C7orf25Q9BPX7 421 aa29.25■■■□□ 2.27
HLA-C-208ENST00000487245 MRIQ9BWK5 157 aa29.25■■■□□ 2.27
HLA-C-208ENST00000487245 BIN2Q9UBW5 565 aaPredicted RBP29.25■■■□□ 2.27
HLA-C-208ENST00000487245 FRMPD2Q68DX3 1309 aaPredicted RBP29.25■■■□□ 2.27
HLA-C-208ENST00000487245 PNMA6FA0A0J9YX94 578 aa29.25■■■□□ 2.27
HLA-C-208ENST00000487245 PLSCR1O15162 318 aa29.25■■■□□ 2.27
HLA-C-208ENST00000487245 COBLO75128 1261 aa29.25■■■□□ 2.27
HLA-C-208ENST00000487245 PLCG1P19174 1290 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms