RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 MYH2Q9UKX2 1941 aa16.66■□□□□ 0.26
TTC3-219ENST00000485402 FAM237AA0A1B0GTK4 181 aa16.66■□□□□ 0.26
TTC3-219ENST00000485402 PPP4CP60510 307 aa16.66■□□□□ 0.26
TTC3-219ENST00000485402 CC2D2BQ6DHV5 1058 aa16.66■□□□□ 0.26
TTC3-219ENST00000485402 LARGE2Q8N3Y3 721 aa16.66■□□□□ 0.26
TTC3-219ENST00000485402 ARPP21Q9UBL0 812 aaPredicted RBP16.66■□□□□ 0.26
TTC3-219ENST00000485402 IFNAR1P17181 557 aa16.66■□□□□ 0.26
TTC3-219ENST00000485402 EARS2Q5JPH6 523 aaKnown RBP16.66■□□□□ 0.26
TTC3-219ENST00000485402 V9GY48 417 aaPredicted RBP16.66■□□□□ 0.26
TTC3-219ENST00000485402 SLC20A2Q08357 652 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 DNAJC21Q5F1R6 531 aaKnown RBP16.65■□□□□ 0.26
TTC3-219ENST00000485402 RASGRP2Q7LDG7 609 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 PCMTD1Q96MG8 357 aaPredicted RBP16.65■□□□□ 0.26
TTC3-219ENST00000485402 PLIN2Q99541 437 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 RNF40O75150 1001 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 DPYDQ12882 1025 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 KRT31Q15323 416 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 GBP3Q9H0R5 595 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 ACBD3Q9H3P7 528 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 ANAPC4Q9UJX5 808 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 USP17L3A6NCW0 530 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 USP17L4A6NCW7 530 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 EIF3CLB5ME19 914 aaKnown RBP16.65■□□□□ 0.26
TTC3-219ENST00000485402 RAD17O75943 681 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 MATR3P43243 847 aaKnown RBP eCLIP16.65■□□□□ 0.266e-7■■■□□ 16.2
TTC3-219ENST00000485402 TSR1Q2NL82 804 aaKnown RBP16.65■□□□□ 0.26
TTC3-219ENST00000485402 USP17L1Q7RTZ2 530 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 TRIML1Q8N9V2 468 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 SLC44A5Q8NCS7 719 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 SUPT20HQ8NEM7 779 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 ANKRD20A12PQ8NF67 263 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 CTAGE1Q96RT6 745 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 EIF3CQ99613 913 aaKnown RBP16.65■□□□□ 0.26
TTC3-219ENST00000485402 MKNK2Q9HBH9 465 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 PCDHAC2Q9Y5I4 1007 aa16.65■□□□□ 0.26
TTC3-219ENST00000485402 DEXIO95424 95 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 RTKN2Q8IZC4 609 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 CRACR2BQ8N4Y2 399 aaPredicted RBP16.64■□□□□ 0.25
TTC3-219ENST00000485402 FANCBQ8NB91 859 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 DRC1Q96MC2 740 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 NAA15Q9BXJ9 866 aaKnown RBP16.64■□□□□ 0.25
TTC3-219ENST00000485402 BCS1LQ9Y276 419 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 LTBP1Q14766 1721 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 TSPY2A6NKD2 308 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 WNT7AO00755 349 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 NMT2O60551 498 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 PLCG2P16885 1265 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 TTC19Q6DKK2 380 aaPredicted RBP16.64■□□□□ 0.25
TTC3-219ENST00000485402 TMED8Q6PL24 325 aaPredicted RBP16.64■□□□□ 0.25
TTC3-219ENST00000485402 TMTC1Q8IUR5 882 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 TEKT1Q969V4 418 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 PPARDQ03181 441 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 CCDC122Q5T0U0 273 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 STRIP1Q5VSL9 837 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 KIAA1328Q86T90 577 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 IQCA1Q86XH1 822 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 ABHD10Q9NUJ1 306 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 USP40Q9NVE5 1235 aa16.64■□□□□ 0.25
TTC3-219ENST00000485402 TNKSO95271 1327 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 GTF2A1P52655 376 aaPredicted RBP16.63■□□□□ 0.25
TTC3-219ENST00000485402 RHBDL3P58872 404 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 C12orf60Q5U649 245 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 LRRC31Q6UY01 552 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 APTXQ7Z2E3 356 aaKnown RBP16.63■□□□□ 0.25
TTC3-219ENST00000485402 HNRNPLLQ8WVV9 542 aaKnown RBP16.63■□□□□ 0.25
TTC3-219ENST00000485402 FOXP1Q9H334 677 aaPredicted RBP16.63■□□□□ 0.25
TTC3-219ENST00000485402 PSD3Q9NYI0 1048 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 RAB21Q9UL25 225 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 MTMR7Q9Y216 660 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 WDR19Q8NEZ3 1342 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 MYH15Q9Y2K3 1946 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 BAZ2BQ9UIF8 2168 aaKnown RBP16.63■□□□□ 0.25
TTC3-219ENST00000485402 CACNB3P54284 484 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 TTC31Q49AM3 519 aaPredicted RBP16.63■□□□□ 0.25
TTC3-219ENST00000485402 DALRD3Q5D0E6 543 aaKnown RBP16.63■□□□□ 0.25
TTC3-219ENST00000485402 CYP26C1Q6V0L0 522 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 SGMS1Q86VZ5 419 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 ZNF654Q8IZM8 581 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 MSANTD4Q8NCY6 345 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 MCM7P33993 719 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 NT5DC1Q5TFE4 455 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 PSMB7Q99436 277 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 CRACR2AQ9BSW2 395 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 JADE2Q9NQC1 790 aa16.63■□□□□ 0.25
TTC3-219ENST00000485402 EPN1Q9Y6I3 576 aaPredicted RBP16.63■□□□□ 0.25
TTC3-219ENST00000485402 YDJCA8MPS7 323 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 DACT2Q5SW24 774 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 FAM71BQ8TC56 605 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 FAM163AQ96GL9 167 aaPredicted RBP16.62■□□□□ 0.25
TTC3-219ENST00000485402 MMS19Q96T76 1030 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 MKRN1Q9UHC7 482 aaKnown RBP16.62■□□□□ 0.25
TTC3-219ENST00000485402 QSER1Q2KHR3 1735 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 MACROD2A1Z1Q3 448 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 PPP1R3GB7ZBB8 358 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 LIFRP42702 1097 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 CRKP46108 304 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 TGFB2P61812 414 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 WHAMMP3Q1A5X7 153 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 AFAP1L1Q8TED9 768 aa16.62■□□□□ 0.25
TTC3-219ENST00000485402 GDAQ9Y2T3 454 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms