RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	FBXO40	Q9UH90	709 aa		18.57	■□□□□ 0.56
HDLBP-238	ENST00000479894	GNE	Q9Y223	722 aa	Known RBP	18.57	■□□□□ 0.56
HDLBP-238	ENST00000479894	ZNF318	Q5VUA4	2279 aa		18.57	■□□□□ 0.56
HDLBP-238	ENST00000479894	PTPRS	Q13332	1948 aa		18.57	■□□□□ 0.56
HDLBP-238	ENST00000479894	ASTN1	O14525	1302 aa		18.56	■□□□□ 0.56
HDLBP-238	ENST00000479894	IGHD	P01880	384 aa		18.56	■□□□□ 0.56
HDLBP-238	ENST00000479894	PDE6A	P16499	860 aa		18.56	■□□□□ 0.56
HDLBP-238	ENST00000479894	TAP1	Q03518	808 aa		18.56	■□□□□ 0.56
HDLBP-238	ENST00000479894	CCDC144CP	Q8IYA2	1237 aa		18.56	■□□□□ 0.56
HDLBP-238	ENST00000479894	ANKRD35	Q8N283	1001 aa		18.56	■□□□□ 0.56
HDLBP-238	ENST00000479894	PRPF38A	Q8NAV1	312 aa	Known RBP	18.56	■□□□□ 0.56
HDLBP-238	ENST00000479894	CHST13	Q8NET6	341 aa		18.56	■□□□□ 0.56
HDLBP-238	ENST00000479894	ARNTL2	Q8WYA1	636 aa		18.56	■□□□□ 0.56
HDLBP-238	ENST00000479894	SCLY	Q96I15	445 aa		18.56	■□□□□ 0.56
HDLBP-238	ENST00000479894	TRPV6	Q9H1D0	765 aa		18.56	■□□□□ 0.56
HDLBP-238	ENST00000479894	IL1RAPL2	Q9NP60	686 aa		18.56	■□□□□ 0.56
HDLBP-238	ENST00000479894	KIF28P	B7ZC32	967 aa		18.55	■□□□□ 0.56
HDLBP-238	ENST00000479894	SUPT20HL2	P0C7V6	817 aa		18.55	■□□□□ 0.56
HDLBP-238	ENST00000479894	ALAD	P13716	330 aa		18.55	■□□□□ 0.56
HDLBP-238	ENST00000479894	RFC2	P35250	354 aa		18.55	■□□□□ 0.56
HDLBP-238	ENST00000479894	CDK8	P49336	464 aa		18.55	■□□□□ 0.56
HDLBP-238	ENST00000479894	NHLH1	Q02575	133 aa		18.55	■□□□□ 0.56
HDLBP-238	ENST00000479894	GRB10	Q13322	594 aa		18.55	■□□□□ 0.56
HDLBP-238	ENST00000479894	FSCN1	Q16658	493 aa	Known RBP	18.55	■□□□□ 0.56
HDLBP-238	ENST00000479894	SLC9C2	Q5TAH2	1124 aa		18.55	■□□□□ 0.56
HDLBP-238	ENST00000479894	C16orf86	Q6ZW13	317 aa		18.55	■□□□□ 0.56
HDLBP-238	ENST00000479894	TLK2	Q86UE8	772 aa		18.55	■□□□□ 0.56
HDLBP-238	ENST00000479894	ATP8A2	Q9NTI2	1148 aa		18.55	■□□□□ 0.56
HDLBP-238	ENST00000479894		Q9Y3F1	56 aa		18.55	■□□□□ 0.56
HDLBP-238	ENST00000479894	TRIP12	Q14669	1992 aa	Predicted RBP	18.54	■□□□□ 0.56
HDLBP-238	ENST00000479894	NUCB1	Q02818	461 aa		18.54	■□□□□ 0.56
HDLBP-238	ENST00000479894	C12orf60	Q5U649	245 aa		18.54	■□□□□ 0.56
HDLBP-238	ENST00000479894	FAM178B	Q8IXR5	827 aa		18.54	■□□□□ 0.56
HDLBP-238	ENST00000479894	GJD3	Q8N144	294 aa		18.54	■□□□□ 0.56
HDLBP-238	ENST00000479894	LCORL	Q8N3X6	602 aa		18.54	■□□□□ 0.56
HDLBP-238	ENST00000479894	AP5M1	Q9H0R1	490 aa		18.54	■□□□□ 0.56
HDLBP-238	ENST00000479894	MYH7	P12883	1935 aa		18.54	■□□□□ 0.56
HDLBP-238	ENST00000479894	ZNF532	Q9HCE3	1301 aa		18.53	■□□□□ 0.56
HDLBP-238	ENST00000479894	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	18.53	■□□□□ 0.56
HDLBP-238	ENST00000479894	TCRBV5S4A2T	A0A5A2	114 aa		18.53	■□□□□ 0.56
HDLBP-238	ENST00000479894	LPXN	O60711	386 aa		18.53	■□□□□ 0.56
HDLBP-238	ENST00000479894	ZBED4	O75132	1171 aa		18.53	■□□□□ 0.56
HDLBP-238	ENST00000479894	OAZ1	P54368	228 aa		18.53	■□□□□ 0.56
HDLBP-238	ENST00000479894	NOL8	Q76FK4	1167 aa	Known RBP	18.53	■□□□□ 0.56
HDLBP-238	ENST00000479894	CHD1L	Q86WJ1	897 aa		18.53	■□□□□ 0.56
HDLBP-238	ENST00000479894	AMOTL1	Q8IY63	956 aa		18.53	■□□□□ 0.56
HDLBP-238	ENST00000479894	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.53	■□□□□ 0.56
HDLBP-238	ENST00000479894	SCN10A	Q9Y5Y9	1956 aa		18.53	■□□□□ 0.56
HDLBP-238	ENST00000479894	SI	P14410	1827 aa		18.53	■□□□□ 0.56
HDLBP-238	ENST00000479894	WDFY4	Q6ZS81	3184 aa		18.52	■□□□□ 0.56
HDLBP-238	ENST00000479894	RAD21	O60216	631 aa		18.52	■□□□□ 0.56
HDLBP-238	ENST00000479894	HERC6	Q8IVU3	1022 aa		18.52	■□□□□ 0.56
HDLBP-238	ENST00000479894	CPXCR1	Q8N123	301 aa		18.52	■□□□□ 0.56
HDLBP-238	ENST00000479894	SLC38A10	Q9HBR0	1119 aa		18.52	■□□□□ 0.56
HDLBP-238	ENST00000479894	CTDP1	Q9Y5B0	961 aa	Predicted RBP	18.52	■□□□□ 0.56
HDLBP-238	ENST00000479894	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	18.51	■□□□□ 0.55
HDLBP-238	ENST00000479894	ASB14	A6NK59	587 aa		18.51	■□□□□ 0.55
HDLBP-238	ENST00000479894	CSPP1	Q1MSJ5	1256 aa		18.51	■□□□□ 0.55
HDLBP-238	ENST00000479894	LEXM	Q3ZCV2	418 aa		18.51	■□□□□ 0.55
HDLBP-238	ENST00000479894	B4GALNT3	Q6L9W6	998 aa		18.51	■□□□□ 0.55
HDLBP-238	ENST00000479894	DEFB128	Q7Z7B8	93 aa		18.51	■□□□□ 0.55
HDLBP-238	ENST00000479894	FAM133A	Q8N9E0	248 aa		18.51	■□□□□ 0.55
HDLBP-238	ENST00000479894	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	18.51	■□□□□ 0.55
HDLBP-238	ENST00000479894	ECHDC1	Q9NTX5	307 aa		18.51	■□□□□ 0.55
HDLBP-238	ENST00000479894	TTC41P	Q6P2S7	1318 aa		18.5	■□□□□ 0.55
HDLBP-238	ENST00000479894		F5H6K3	240 aa		18.5	■□□□□ 0.55
HDLBP-238	ENST00000479894	DYNC1LI2	O43237	492 aa	Predicted RBP	18.5	■□□□□ 0.55
HDLBP-238	ENST00000479894	BAIAP3	O94812	1187 aa		18.5	■□□□□ 0.55
HDLBP-238	ENST00000479894	ARHGEF15	O94989	841 aa		18.5	■□□□□ 0.55
HDLBP-238	ENST00000479894	SLC4A3	P48751	1232 aa		18.5	■□□□□ 0.55
HDLBP-238	ENST00000479894	KLRC3	Q07444	240 aa		18.5	■□□□□ 0.55
HDLBP-238	ENST00000479894	IQSEC1	Q6DN90	963 aa		18.5	■□□□□ 0.55
HDLBP-238	ENST00000479894	UBE2Z	Q9H832	354 aa	Predicted RBP	18.5	■□□□□ 0.55
HDLBP-238	ENST00000479894	NYAP2	Q9P242	653 aa		18.5	■□□□□ 0.55
HDLBP-238	ENST00000479894	TNKS	O95271	1327 aa		18.49	■□□□□ 0.55
HDLBP-238	ENST00000479894	PITPNM1	O00562	1244 aa		18.49	■□□□□ 0.55
HDLBP-238	ENST00000479894	SMARCA5	O60264	1052 aa	Predicted RBP	18.49	■□□□□ 0.55
HDLBP-238	ENST00000479894	FDX1	P10109	184 aa		18.49	■□□□□ 0.55
HDLBP-238	ENST00000479894	SMPD1	P17405	629 aa		18.49	■□□□□ 0.55
HDLBP-238	ENST00000479894	PSMC6	P62333	389 aa		18.49	■□□□□ 0.55
HDLBP-238	ENST00000479894	FBXL18	Q96ME1	805 aa		18.49	■□□□□ 0.55
HDLBP-238	ENST00000479894	UIMC1	Q96RL1	719 aa		18.49	■□□□□ 0.55
HDLBP-238	ENST00000479894	NUP88	Q99567	741 aa	Predicted RBP	18.49	■□□□□ 0.55
HDLBP-238	ENST00000479894	BCL11A	Q9H165	835 aa		18.49	■□□□□ 0.55
HDLBP-238	ENST00000479894	ARMT1	Q9H993	441 aa		18.49	■□□□□ 0.55
HDLBP-238	ENST00000479894	RAVER2	Q9HCJ3	691 aa	Known RBP	18.49	■□□□□ 0.55
HDLBP-238	ENST00000479894	USP17L12	C9JPN9	530 aa		18.48	■□□□□ 0.55
HDLBP-238	ENST00000479894	USP17L21	D6R901	530 aa		18.48	■□□□□ 0.55
HDLBP-238	ENST00000479894	NDUFB10	O96000	172 aa		18.48	■□□□□ 0.55
HDLBP-238	ENST00000479894	CYP2C9	P11712	490 aa		18.48	■□□□□ 0.55
HDLBP-238	ENST00000479894	ATP5J	P18859	108 aa		18.48	■□□□□ 0.55
HDLBP-238	ENST00000479894	MX1	P20591	662 aa		18.48	■□□□□ 0.55
HDLBP-238	ENST00000479894	CNTN2	Q02246	1040 aa		18.48	■□□□□ 0.55
HDLBP-238	ENST00000479894	DDRGK1	Q96HY6	314 aa		18.48	■□□□□ 0.55
HDLBP-238	ENST00000479894	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	18.48	■□□□□ 0.55
HDLBP-238	ENST00000479894	LNPK	Q9C0E8	428 aa		18.48	■□□□□ 0.55
HDLBP-238	ENST00000479894	TRMT13	Q9NUP7	481 aa	Known RBP	18.48	■□□□□ 0.55
HDLBP-238	ENST00000479894	FEM1B	Q9UK73	627 aa		18.48	■□□□□ 0.55
HDLBP-238	ENST00000479894	LCT	P09848	1927 aa		18.47	■□□□□ 0.55
HDLBP-238	ENST00000479894	PRKAB2	O43741	272 aa		18.47	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms