RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 C6orf50Q9HD87 102 aa23.24■■□□□ 1.31
TMED4-204ENST00000477639 OR52Z1P0C646 297 aa23.23■■□□□ 1.31
TMED4-204ENST00000477639 CLCN6P51797 869 aa23.23■■□□□ 1.31
TMED4-204ENST00000477639 TRIM14Q14142 442 aa23.23■■□□□ 1.31
TMED4-204ENST00000477639 TMTC1Q8IUR5 882 aa23.23■■□□□ 1.31
TMED4-204ENST00000477639 GIMAP8Q8ND71 665 aaPredicted RBP23.23■■□□□ 1.31
TMED4-204ENST00000477639 RASSF8Q8NHQ8 419 aa23.23■■□□□ 1.31
TMED4-204ENST00000477639 PLIN2Q99541 437 aa23.23■■□□□ 1.31
TMED4-204ENST00000477639 A0A0U1RQJ8 604 aa23.23■■□□□ 1.31
TMED4-204ENST00000477639 GNA11P29992 359 aa23.23■■□□□ 1.31
TMED4-204ENST00000477639 PMS1P54277 932 aaKnown RBP23.23■■□□□ 1.31
TMED4-204ENST00000477639 ATRIPQ8WXE1 791 aa23.23■■□□□ 1.31
TMED4-204ENST00000477639 GTPBP4Q9BZE4 634 aaKnown RBP23.23■■□□□ 1.31
TMED4-204ENST00000477639 IRX2Q9BZI1 471 aaPredicted RBP23.23■■□□□ 1.31
TMED4-204ENST00000477639 MAGEF1Q9HAY2 307 aa23.23■■□□□ 1.31
TMED4-204ENST00000477639 ABHD10Q9NUJ1 306 aa23.23■■□□□ 1.31
TMED4-204ENST00000477639 TRIM49BA6NDI0 452 aa23.22■■□□□ 1.31
TMED4-204ENST00000477639 ERVK-24P63145 666 aa23.22■■□□□ 1.31
TMED4-204ENST00000477639 CABP7Q86V35 215 aa23.22■■□□□ 1.31
TMED4-204ENST00000477639 KRT222Q8N1A0 295 aa23.22■■□□□ 1.31
TMED4-204ENST00000477639 PIGSQ96S52 555 aa23.22■■□□□ 1.31
TMED4-204ENST00000477639 LZTFL1Q9NQ48 299 aa23.22■■□□□ 1.31
TMED4-204ENST00000477639 USP17L5A8MUK1 530 aa23.21■■□□□ 1.31
TMED4-204ENST00000477639 CCNT1O60563 726 aaKnown RBP23.21■■□□□ 1.31
TMED4-204ENST00000477639 PPP2R3AQ06190 1150 aa23.21■■□□□ 1.31
TMED4-204ENST00000477639 LETM2Q2VYF4 491 aa23.21■■□□□ 1.31
TMED4-204ENST00000477639 CRAMP1Q96RY5 1269 aa23.21■■□□□ 1.31
TMED4-204ENST00000477639 THAP9Q9H5L6 903 aa23.21■■□□□ 1.31
TMED4-204ENST00000477639 RIOX1Q9H6W3 641 aa23.21■■□□□ 1.31
TMED4-204ENST00000477639 MYH1P12882 1939 aa23.21■■□□□ 1.31
TMED4-204ENST00000477639 ESYT2A0FGR8 921 aa23.21■■□□□ 1.31
TMED4-204ENST00000477639 PLCG1P19174 1290 aa23.21■■□□□ 1.31
TMED4-204ENST00000477639 RSRC2Q7L4I2 434 aaKnown RBP23.21■■□□□ 1.31
TMED4-204ENST00000477639 NEK8Q86SG6 692 aa23.21■■□□□ 1.31
TMED4-204ENST00000477639 PLIN4Q96Q06 1357 aa23.2■■□□□ 1.3
TMED4-204ENST00000477639 EEF1GP26641 437 aaKnown RBP23.2■■□□□ 1.3
TMED4-204ENST00000477639 SOGA3Q5TF21 947 aa23.2■■□□□ 1.3
TMED4-204ENST00000477639 SYT17Q9BSW7 474 aa23.2■■□□□ 1.3
TMED4-204ENST00000477639 VAT1LQ9HCJ6 419 aa23.2■■□□□ 1.3
TMED4-204ENST00000477639 SEC63Q9UGP8 760 aaKnown RBP23.2■■□□□ 1.3
TMED4-204ENST00000477639 DAGLAQ9Y4D2 1042 aa23.2■■□□□ 1.3
TMED4-204ENST00000477639 KLRG2A4D1S0 409 aaPredicted RBP23.2■■□□□ 1.3
TMED4-204ENST00000477639 MMP10P09238 476 aa23.2■■□□□ 1.3
TMED4-204ENST00000477639 UBXN1Q04323 297 aa23.2■■□□□ 1.3
TMED4-204ENST00000477639 DDR1Q08345 913 aa23.2■■□□□ 1.3
TMED4-204ENST00000477639 ORC2Q13416 577 aaPredicted RBP23.2■■□□□ 1.3
TMED4-204ENST00000477639 STIM1Q13586 685 aa23.2■■□□□ 1.3
TMED4-204ENST00000477639 TTI2Q6NXR4 508 aa23.2■■□□□ 1.3
TMED4-204ENST00000477639 NLGN1Q8N2Q7 840 aa23.2■■□□□ 1.3
TMED4-204ENST00000477639 MB21D1Q8N884 522 aa23.2■■□□□ 1.3
TMED4-204ENST00000477639 ZNF507Q8TCN5 953 aa23.2■■□□□ 1.3
TMED4-204ENST00000477639 NUP88Q99567 741 aaPredicted RBP23.2■■□□□ 1.3
TMED4-204ENST00000477639 C7orf25Q9BPX7 421 aa23.2■■□□□ 1.3
TMED4-204ENST00000477639 PRDM4Q9UKN5 801 aa23.2■■□□□ 1.3
TMED4-204ENST00000477639 TTF2Q9UNY4 1162 aaKnown RBP23.2■■□□□ 1.3
TMED4-204ENST00000477639 LGALS16A8MUM7 142 aa23.19■■□□□ 1.3
TMED4-204ENST00000477639 PSMA7O14818 248 aa23.19■■□□□ 1.3
TMED4-204ENST00000477639 BMS1Q14692 1282 aaKnown RBP23.19■■□□□ 1.3
TMED4-204ENST00000477639 CYP26C1Q6V0L0 522 aa23.19■■□□□ 1.3
TMED4-204ENST00000477639 CREBRFQ8IUR6 639 aa23.19■■□□□ 1.3
TMED4-204ENST00000477639 DHTKD1Q96HY7 919 aaPredicted RBP23.19■■□□□ 1.3
TMED4-204ENST00000477639 UBA5Q9GZZ9 404 aa23.19■■□□□ 1.3
TMED4-204ENST00000477639 A0A1W2PQC6 194 aa23.18■■□□□ 1.3
TMED4-204ENST00000477639 KIF5CO60282 957 aa23.18■■□□□ 1.3
TMED4-204ENST00000477639 ZRANB2O95218 330 aaKnown RBP eCLIP23.18■■□□□ 1.3
TMED4-204ENST00000477639 PDHBP11177 359 aa23.18■■□□□ 1.3
TMED4-204ENST00000477639 GABPAQ06546 454 aa23.18■■□□□ 1.3
TMED4-204ENST00000477639 ACRBPQ8NEB7 543 aa23.18■■□□□ 1.3
TMED4-204ENST00000477639 TBCKQ8TEA7 893 aa23.18■■□□□ 1.3
TMED4-204ENST00000477639 NOC3LQ8WTT2 800 aaKnown RBP23.18■■□□□ 1.3
TMED4-204ENST00000477639 DUSP9Q99956 384 aaKnown RBP23.18■■□□□ 1.3
TMED4-204ENST00000477639 MMTAG2Q9BU76 263 aaKnown RBP23.18■■□□□ 1.3
TMED4-204ENST00000477639 MTMR4Q9NYA4 1195 aa23.18■■□□□ 1.3
TMED4-204ENST00000477639 FHOD1Q9Y613 1164 aa23.18■■□□□ 1.3
TMED4-204ENST00000477639 LTBP1Q14766 1721 aa23.18■■□□□ 1.3
TMED4-204ENST00000477639 FOCADQ5VW36 1801 aa23.18■■□□□ 1.3
TMED4-204ENST00000477639 C6orf229H3BNL8 230 aa23.18■■□□□ 1.3
TMED4-204ENST00000477639 KRT9P35527 623 aa23.18■■□□□ 1.3
TMED4-204ENST00000477639 TRIM9Q9C026 710 aa23.18■■□□□ 1.3
TMED4-204ENST00000477639 ARGLU1Q9NWB6 273 aaPredicted RBP23.18■■□□□ 1.3
TMED4-204ENST00000477639 BIN2Q9UBW5 565 aaPredicted RBP23.18■■□□□ 1.3
TMED4-204ENST00000477639 IGKV6D-41A0A0C4DH26 115 aa23.17■■□□□ 1.3
TMED4-204ENST00000477639 hCG_1984214I3L0E3 225 aa23.17■■□□□ 1.3
TMED4-204ENST00000477639 GABPB1Q06547 395 aaPredicted RBP23.17■■□□□ 1.3
TMED4-204ENST00000477639 JAKMIP3Q5VZ66 844 aa23.17■■□□□ 1.3
TMED4-204ENST00000477639 GPR161Q8N6U8 529 aaKnown RBP23.17■■□□□ 1.3
TMED4-204ENST00000477639 ZNF713Q8N859 430 aaPredicted RBP23.17■■□□□ 1.3
TMED4-204ENST00000477639 TRIM47Q96LD4 638 aa23.17■■□□□ 1.3
TMED4-204ENST00000477639 TMEM260Q9NX78 707 aa23.17■■□□□ 1.3
TMED4-204ENST00000477639 POLRMTO00411 1230 aaKnown RBP23.16■■□□□ 1.3
TMED4-204ENST00000477639 TECP42680 631 aa23.16■■□□□ 1.3
TMED4-204ENST00000477639 GTF2IP78347 998 aa23.16■■□□□ 1.3
TMED4-204ENST00000477639 REXO1Q8N1G1 1221 aaKnown RBP23.16■■□□□ 1.3
TMED4-204ENST00000477639 LRRC37AA6NMS7 1700 aa23.16■■□□□ 1.3
TMED4-204ENST00000477639 SNHG28P0DPA3 235 aa23.16■■□□□ 1.3
TMED4-204ENST00000477639 ARHGAP25P42331 645 aa23.16■■□□□ 1.3
TMED4-204ENST00000477639 ZNF569Q5MCW4 686 aa23.16■■□□□ 1.3
TMED4-204ENST00000477639 SP8Q8IXZ3 490 aa23.16■■□□□ 1.3
TMED4-204ENST00000477639 MTMR9Q96QG7 549 aa23.16■■□□□ 1.3
TMED4-204ENST00000477639 EPC1Q9H2F5 836 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms