RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 ANTXR1Q9H6X2 564 aa6.59□□□□□ -1.35
SCFD1-205ENST00000469043 ADAMTS1Q9UHI8 967 aa6.59□□□□□ -1.35
SCFD1-205ENST00000469043 ARID4BQ4LE39 1312 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-205ENST00000469043 MEIS3P2A8K0S8 358 aa6.58□□□□□ -1.36
SCFD1-205ENST00000469043 RECKO95980 971 aa6.58□□□□□ -1.36
SCFD1-205ENST00000469043 GSTM1P09488 218 aa6.58□□□□□ -1.36
SCFD1-205ENST00000469043 CAP1Q01518 475 aa6.58□□□□□ -1.36
SCFD1-205ENST00000469043 TARBP2Q15633 366 aaKnown RBP6.58□□□□□ -1.36
SCFD1-205ENST00000469043 INTS3Q68E01 1043 aaKnown RBP6.58□□□□□ -1.36
SCFD1-205ENST00000469043 CRTC3Q6UUV7 619 aa6.58□□□□□ -1.36
SCFD1-205ENST00000469043 CCDC144CPQ8IYA2 1237 aa6.58□□□□□ -1.36
SCFD1-205ENST00000469043 SYT8Q8NBV8 401 aa6.58□□□□□ -1.36
SCFD1-205ENST00000469043 TMEM52Q8NDY8 209 aa6.58□□□□□ -1.36
SCFD1-205ENST00000469043 JMJD8Q96S16 334 aa6.58□□□□□ -1.36
SCFD1-205ENST00000469043 SLC9A7Q96T83 725 aa6.58□□□□□ -1.36
SCFD1-205ENST00000469043 HIRIP3Q9BW71 556 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-205ENST00000469043 NT5C1AQ9BXI3 368 aa6.58□□□□□ -1.36
SCFD1-205ENST00000469043 IRS2Q9Y4H2 1338 aa6.57□□□□□ -1.36
SCFD1-205ENST00000469043 NOP2P46087 812 aaKnown RBP6.57□□□□□ -1.36
SCFD1-205ENST00000469043 KCNC1P48547 511 aa6.57□□□□□ -1.36
SCFD1-205ENST00000469043 PLEKHN1Q494U1 663 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-205ENST00000469043 NOL9Q5SY16 702 aaKnown RBP6.57□□□□□ -1.36
SCFD1-205ENST00000469043 SLITRK4Q8IW52 837 aa6.57□□□□□ -1.36
SCFD1-205ENST00000469043 SUCOQ9UBS9 1254 aaKnown RBP6.57□□□□□ -1.36
SCFD1-205ENST00000469043 ERCC5P28715 1186 aaPredicted RBP6.56□□□□□ -1.36
SCFD1-205ENST00000469043 MVKQ03426 396 aa6.56□□□□□ -1.36
SCFD1-205ENST00000469043 PLP2Q04941 152 aa6.56□□□□□ -1.36
SCFD1-205ENST00000469043 RTP2Q5QGT7 225 aa6.56□□□□□ -1.36
SCFD1-205ENST00000469043 GIMAP6Q6P9H5 292 aa6.56□□□□□ -1.36
SCFD1-205ENST00000469043 PAQR3Q6TCH7 311 aa6.56□□□□□ -1.36
SCFD1-205ENST00000469043 CYBBP04839 570 aa6.55□□□□□ -1.36
SCFD1-205ENST00000469043 ADRB1P08588 477 aa6.55□□□□□ -1.36
SCFD1-205ENST00000469043 CEBPAP49715 358 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-205ENST00000469043 ZNF200P98182 395 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-205ENST00000469043 DPH6Q7L8W6 267 aa6.55□□□□□ -1.36
SCFD1-205ENST00000469043 TP53I13Q8NBR0 393 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-205ENST00000469043 SMARCC1Q92922 1105 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-205ENST00000469043 SLC12A9Q9BXP2 914 aa6.55□□□□□ -1.36
SCFD1-205ENST00000469043 ADAM7Q9H2U9 754 aa6.55□□□□□ -1.36
SCFD1-205ENST00000469043 IMPDH2P12268 514 aa6.54□□□□□ -1.36
SCFD1-205ENST00000469043 IGFBP6P24592 240 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-205ENST00000469043 SPATS1Q496A3 300 aa6.54□□□□□ -1.36
SCFD1-205ENST00000469043 ANKRD39Q53RE8 183 aa6.54□□□□□ -1.36
SCFD1-205ENST00000469043 BICRALQ6AI39 1079 aa6.54□□□□□ -1.36
SCFD1-205ENST00000469043 CYP2R1Q6VVX0 501 aa6.54□□□□□ -1.36
SCFD1-205ENST00000469043 SPON2Q9BUD6 331 aa6.54□□□□□ -1.36
SCFD1-205ENST00000469043 PDLIM7Q9NR12 457 aa6.54□□□□□ -1.36
SCFD1-205ENST00000469043 DBR1Q9UK59 544 aaKnown RBP6.54□□□□□ -1.36
SCFD1-205ENST00000469043 FAM86C2PA6NEL3 165 aa6.53□□□□□ -1.36
SCFD1-205ENST00000469043 FFAR3O14843 346 aa6.53□□□□□ -1.36
SCFD1-205ENST00000469043 SRGAP3O43295 1099 aa6.53□□□□□ -1.36
SCFD1-205ENST00000469043 TBC1D8O95759 1140 aa6.53□□□□□ -1.36
SCFD1-205ENST00000469043 MSL3P1P0C860 447 aa6.53□□□□□ -1.36
SCFD1-205ENST00000469043 LIMS1P48059 325 aa6.53□□□□□ -1.36
SCFD1-205ENST00000469043 PMS1P54277 932 aaKnown RBP6.53□□□□□ -1.36
SCFD1-205ENST00000469043 SLURP1P55000 103 aa6.53□□□□□ -1.36
SCFD1-205ENST00000469043 FOXO4P98177 505 aa6.53□□□□□ -1.36
SCFD1-205ENST00000469043 USP48Q86UV5 1035 aa6.53□□□□□ -1.36
SCFD1-205ENST00000469043 KIAA0825Q8IV33 1275 aa6.53□□□□□ -1.36
SCFD1-205ENST00000469043 SUSD2Q9UGT4 822 aa6.53□□□□□ -1.36
SCFD1-205ENST00000469043 FAN1Q9Y2M0 1017 aa6.53□□□□□ -1.36
SCFD1-205ENST00000469043 C9IYK1 514 aa6.52□□□□□ -1.37
SCFD1-205ENST00000469043 DBHP09172 617 aa6.52□□□□□ -1.37
SCFD1-205ENST00000469043 GGNQ86UU5 652 aa6.52□□□□□ -1.37
SCFD1-205ENST00000469043 CERS3Q8IU89 383 aa6.52□□□□□ -1.37
SCFD1-205ENST00000469043 SRRTQ9BXP5 876 aaKnown RBP6.52□□□□□ -1.37
SCFD1-205ENST00000469043 SF3B6Q9Y3B4 125 aaKnown RBP6.52□□□□□ -1.37
SCFD1-205ENST00000469043 F8W031 263 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-205ENST00000469043 H0Y8X5 98 aa6.51□□□□□ -1.37
SCFD1-205ENST00000469043 SHOXO15266 292 aa6.51□□□□□ -1.37
SCFD1-205ENST00000469043 FGF10O15520 208 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-205ENST00000469043 NCAM1P13591 858 aa6.51□□□□□ -1.37
SCFD1-205ENST00000469043 CORO7P57737 925 aa6.51□□□□□ -1.37
SCFD1-205ENST00000469043 NFKB2Q00653 900 aa6.51□□□□□ -1.37
SCFD1-205ENST00000469043 ZFYVE27Q5T4F4 411 aa6.51□□□□□ -1.37
SCFD1-205ENST00000469043 FAM9AQ8IZU1 332 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-205ENST00000469043 TAB3Q8N5C8 712 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-205ENST00000469043 TM9SF2Q99805 663 aa6.51□□□□□ -1.37
SCFD1-205ENST00000469043 BDH2Q9BUT1 245 aa6.51□□□□□ -1.37
SCFD1-205ENST00000469043 RNF38Q9H0F5 515 aa6.51□□□□□ -1.37
SCFD1-205ENST00000469043 GP6Q9HCN6 339 aa6.51□□□□□ -1.37
SCFD1-205ENST00000469043 USP40Q9NVE5 1235 aa6.51□□□□□ -1.37
SCFD1-205ENST00000469043 PMF1-BGLAPU3KQ54 211 aa6.51□□□□□ -1.37
SCFD1-205ENST00000469043 ACRP10323 421 aa6.5□□□□□ -1.37
SCFD1-205ENST00000469043 ZNF445P59923 1031 aa6.5□□□□□ -1.37
SCFD1-205ENST00000469043 POU4F1Q01851 419 aa6.5□□□□□ -1.37
SCFD1-205ENST00000469043 MRPL58Q14197 206 aaKnown RBP6.5□□□□□ -1.37
SCFD1-205ENST00000469043 UBXN11Q5T124 520 aa6.5□□□□□ -1.37
SCFD1-205ENST00000469043 TDRD10Q5VZ19 366 aaKnown RBP6.5□□□□□ -1.37
SCFD1-205ENST00000469043 DCAF15Q66K64 600 aa6.5□□□□□ -1.37
SCFD1-205ENST00000469043 ZNF662Q6ZS27 426 aa6.5□□□□□ -1.37
SCFD1-205ENST00000469043 NOL8Q76FK4 1167 aaKnown RBP6.5□□□□□ -1.37
SCFD1-205ENST00000469043 LSRQ86X29 649 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-205ENST00000469043 NLGN2Q8NFZ4 835 aa6.5□□□□□ -1.37
SCFD1-205ENST00000469043 BRF1Q92994 677 aa6.5□□□□□ -1.37
SCFD1-205ENST00000469043 PTCHD1Q96NR3 888 aa6.5□□□□□ -1.37
SCFD1-205ENST00000469043 FERD3LQ96RJ6 166 aa6.5□□□□□ -1.37
SCFD1-205ENST00000469043 ZNRF3Q9ULT6 936 aa6.5□□□□□ -1.37
SCFD1-205ENST00000469043 FHOD1Q9Y613 1164 aa6.5□□□□□ -1.37
SCFD1-205ENST00000469043 TP53P04637 393 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms