RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 TBC1D8O95759 1140 aa19■□□□□ 0.63
ACTB-207ENST00000462494 ASIC1P78348 528 aa19■□□□□ 0.63
ACTB-207ENST00000462494 TSR1Q2NL82 804 aaKnown RBP19■□□□□ 0.63
ACTB-207ENST00000462494 OR8K1Q8NGG5 319 aa19■□□□□ 0.63
ACTB-207ENST00000462494 TBCKQ8TEA7 893 aa19■□□□□ 0.63
ACTB-207ENST00000462494 CCDC47Q96A33 483 aaKnown RBP19■□□□□ 0.63
ACTB-207ENST00000462494 AK8Q96MA6 479 aa19■□□□□ 0.63
ACTB-207ENST00000462494 NAPGQ99747 312 aaPredicted RBP19■□□□□ 0.63
ACTB-207ENST00000462494 EPN1Q9Y6I3 576 aaPredicted RBP19■□□□□ 0.63
ACTB-207ENST00000462494 LTBP4Q8N2S1 1624 aa18.99■□□□□ 0.63
ACTB-207ENST00000462494 USP17L5A8MUK1 530 aa18.99■□□□□ 0.63
ACTB-207ENST00000462494 ARHGAP25P42331 645 aa18.99■□□□□ 0.63
ACTB-207ENST00000462494 TTI2Q6NXR4 508 aa18.99■□□□□ 0.63
ACTB-207ENST00000462494 FRMPD2Q68DX3 1309 aaPredicted RBP18.99■□□□□ 0.63
ACTB-207ENST00000462494 POLR3GO15318 223 aaPredicted RBP18.98■□□□□ 0.63
ACTB-207ENST00000462494 TOM1O60784 492 aa18.98■□□□□ 0.63
ACTB-207ENST00000462494 NDUFA10O95299 355 aa18.98■□□□□ 0.63
ACTB-207ENST00000462494 CERS3Q8IU89 383 aa18.98■□□□□ 0.63
ACTB-207ENST00000462494 ZNF507Q8TCN5 953 aa18.98■□□□□ 0.63
ACTB-207ENST00000462494 TRIM9Q9C026 710 aa18.98■□□□□ 0.63
ACTB-207ENST00000462494 CUEDC2Q9H467 287 aa18.98■□□□□ 0.63
ACTB-207ENST00000462494 TMEM260Q9NX78 707 aa18.98■□□□□ 0.63
ACTB-207ENST00000462494 GUCA1BQ9UMX6 200 aa18.98■□□□□ 0.63
ACTB-207ENST00000462494 PLCG2P16885 1265 aa18.98■□□□□ 0.63
ACTB-207ENST00000462494 ATP2B4P23634 1241 aa18.98■□□□□ 0.63
ACTB-207ENST00000462494 C15orf52Q6ZUT6 534 aaKnown RBP18.98■□□□□ 0.63
ACTB-207ENST00000462494 POTEDQ86YR6 584 aa18.98■□□□□ 0.63
ACTB-207ENST00000462494 DHTKD1Q96HY7 919 aaPredicted RBP18.98■□□□□ 0.63
ACTB-207ENST00000462494 TUBGCP2Q9BSJ2 902 aa18.98■□□□□ 0.63
ACTB-207ENST00000462494 TRIM10Q9UDY6 481 aa18.98■□□□□ 0.63
ACTB-207ENST00000462494 USP21Q9UK80 565 aa18.98■□□□□ 0.63
ACTB-207ENST00000462494 A0A1W2PQC6 194 aa18.97■□□□□ 0.63
ACTB-207ENST00000462494 FCER1AP12319 257 aa18.97■□□□□ 0.63
ACTB-207ENST00000462494 TXKP42681 527 aa18.97■□□□□ 0.63
ACTB-207ENST00000462494 STK4Q13043 487 aa18.97■□□□□ 0.63
ACTB-207ENST00000462494 REXO1Q8N1G1 1221 aaKnown RBP18.97■□□□□ 0.63
ACTB-207ENST00000462494 DUSP9Q99956 384 aaKnown RBP18.97■□□□□ 0.63
ACTB-207ENST00000462494 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.97■□□□□ 0.63
ACTB-207ENST00000462494 ATP8B1O43520 1251 aa18.97■□□□□ 0.63
ACTB-207ENST00000462494 IL1R1P14778 569 aa18.97■□□□□ 0.63
ACTB-207ENST00000462494 DNM2P50570 870 aa18.97■□□□□ 0.63
ACTB-207ENST00000462494 RHBDL3P58872 404 aa18.97■□□□□ 0.63
ACTB-207ENST00000462494 PICALMQ13492 652 aa18.97■□□□□ 0.63
ACTB-207ENST00000462494 ANKRD40Q6AI12 368 aa18.97■□□□□ 0.63
ACTB-207ENST00000462494 P2RX5Q93086 422 aa18.97■□□□□ 0.63
ACTB-207ENST00000462494 HPS3Q969F9 1004 aa18.97■□□□□ 0.63
ACTB-207ENST00000462494 PCMTD1Q96MG8 357 aaPredicted RBP18.97■□□□□ 0.63
ACTB-207ENST00000462494 MAGEF1Q9HAY2 307 aa18.97■□□□□ 0.63
ACTB-207ENST00000462494 CAPN11Q9UMQ6 739 aa18.97■□□□□ 0.63
ACTB-207ENST00000462494 DDX60LQ5H9U9 1706 aaKnown RBP18.97■□□□□ 0.63
ACTB-207ENST00000462494 TRIM21P19474 475 aaKnown RBP18.96■□□□□ 0.63
ACTB-207ENST00000462494 EIF6P56537 245 aaKnown RBP18.96■□□□□ 0.63
ACTB-207ENST00000462494 TUBB2AQ13885 445 aa18.96■□□□□ 0.63
ACTB-207ENST00000462494 NOC3LQ8WTT2 800 aaKnown RBP18.96■□□□□ 0.63
ACTB-207ENST00000462494 CALML4Q96GE6 196 aa18.96■□□□□ 0.63
ACTB-207ENST00000462494 TUBB2BQ9BVA1 445 aa18.96■□□□□ 0.63
ACTB-207ENST00000462494 REXO2Q9Y3B8 237 aaKnown RBP18.96■□□□□ 0.63
ACTB-207ENST00000462494 BICDL2A1A5D9 508 aa18.96■□□□□ 0.63
ACTB-207ENST00000462494 C6orf229H3BNL8 230 aa18.96■□□□□ 0.63
ACTB-207ENST00000462494 CCNE1P24864 410 aa18.96■□□□□ 0.63
ACTB-207ENST00000462494 MTIF2P46199 727 aaKnown RBP18.96■□□□□ 0.63
ACTB-207ENST00000462494 KLK7P49862 253 aa18.96■□□□□ 0.63
ACTB-207ENST00000462494 ST5P78524 1137 aa18.96■□□□□ 0.63
ACTB-207ENST00000462494 COA7Q96BR5 231 aa18.96■□□□□ 0.63
ACTB-207ENST00000462494 RBM17Q96I25 401 aaKnown RBP18.96■□□□□ 0.63
ACTB-207ENST00000462494 CNOT6LQ96LI5 555 aaKnown RBP18.96■□□□□ 0.63
ACTB-207ENST00000462494 DNAJC7Q99615 494 aa18.96■□□□□ 0.63
ACTB-207ENST00000462494 C7orf25Q9BPX7 421 aa18.96■□□□□ 0.63
ACTB-207ENST00000462494 ANKZF1Q9H8Y5 726 aa18.96■□□□□ 0.63
ACTB-207ENST00000462494 MYO1AQ9UBC5 1043 aa18.96■□□□□ 0.63
ACTB-207ENST00000462494 TFR2Q9UP52 801 aa18.96■□□□□ 0.63
ACTB-207ENST00000462494 MYH1P12882 1939 aa18.95■□□□□ 0.62
ACTB-207ENST00000462494 RHOXF2BP0C7M4 288 aa18.95■□□□□ 0.62
ACTB-207ENST00000462494 AMPD3Q01432 767 aa18.95■□□□□ 0.62
ACTB-207ENST00000462494 TBC1D8BQ0IIM8 1120 aa18.95■□□□□ 0.62
ACTB-207ENST00000462494 LONRF2Q1L5Z9 754 aa18.95■□□□□ 0.62
ACTB-207ENST00000462494 WDR59Q6PJI9 974 aa18.95■□□□□ 0.62
ACTB-207ENST00000462494 SLF2Q8IX21 1173 aa18.95■□□□□ 0.62
ACTB-207ENST00000462494 LRRC47Q8N1G4 583 aaKnown RBP18.95■□□□□ 0.62
ACTB-207ENST00000462494 RHOXF2Q9BQY4 288 aa18.95■□□□□ 0.62
ACTB-207ENST00000462494 MMTAG2Q9BU76 263 aaKnown RBP18.95■□□□□ 0.62
ACTB-207ENST00000462494 AGPAT5Q9NUQ2 364 aa18.95■□□□□ 0.62
ACTB-207ENST00000462494 POLLQ9UGP5 575 aa18.95■□□□□ 0.62
ACTB-207ENST00000462494 CDK5RAP2Q96SN8 1893 aa18.95■□□□□ 0.62
ACTB-207ENST00000462494 SRGNP10124 158 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 SLC39A2Q9NP94 309 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 LRRC4BQ9NT99 713 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 NHSQ6T4R5 1651 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 TAF1LQ8IZX4 1826 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 CTAGE15A4D2H0 777 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 CCDC151A5D8V7 595 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 ERICH4A6NGS2 130 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 F8W031 263 aaPredicted RBP18.94■□□□□ 0.62
ACTB-207ENST00000462494 SERPINB2P05120 415 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 CTAGE8P0CG41 777 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 PDHBP11177 359 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 SEMA3FQ13275 785 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 SMC1AQ14683 1233 aaKnown RBP18.94■□□□□ 0.62
ACTB-207ENST00000462494 BRD3Q15059 726 aa18.94■□□□□ 0.62
ACTB-207ENST00000462494 CALCRLQ16602 461 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms