RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 TTC19Q6DKK2 380 aaPredicted RBP13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 GIMAP8Q8ND71 665 aaPredicted RBP13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 IPO4Q8TEX9 1081 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 CNOT6LQ96LI5 555 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 DMGDHQ9UI17 866 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-203ENST00000462146 KIAA1551Q9HCM1 1747 aa13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 PSMA7O14818 248 aa13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 CXCR5P32302 372 aa13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 MIIPQ5JXC2 388 aa13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 RCSD1Q6JBY9 416 aa13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 DTHD1Q6ZMT9 781 aa13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 PYM1Q9BRP8 204 aaKnown RBP13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 LRRC1Q9BTT6 524 aa13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 JAG2Q9Y219 1238 aa13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 MYH14Q7Z406 1995 aaKnown RBP13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 EPHB6O15197 1021 aa13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 RHOBTB3O94955 611 aa13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 ERCC3P19447 782 aa13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 STK4Q13043 487 aa13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 SLC35G1Q2M3R5 365 aa13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 CCDC178Q5BJE1 867 aa13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 CREG2Q8IUH2 290 aa13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 PURBQ96QR8 312 aaKnown RBP13.11□□□□□ -0.31
PDZRN3-203ENST00000462146 MOCS3O95396 460 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 NTSR2O95665 410 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 TTC31Q49AM3 519 aaPredicted RBP13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 SND1Q7KZF4 910 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 CERKQ8TCT0 537 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 AENQ8WTP8 325 aaKnown RBP13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 SECISBP2LQ93073 1101 aaKnown RBP13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 DCP1AQ9NPI6 582 aaPredicted RBP13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 NIP7Q9Y221 180 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 RREB1Q92766 1687 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 LAMB2P55268 1798 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 GOLGA6BA6NDN3 693 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 TSPY2A6NKD2 308 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 MCM3P25205 808 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 UBA7P41226 1012 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 MTIF2P46199 727 aaKnown RBP13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 KCNB1Q14721 858 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 CCDC96Q2M329 555 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 NFRKBQ6P4R8 1299 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 KBTBD4Q9NVX7 518 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 PCDHA6Q9UN73 950 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 PCDHA4Q9UN74 947 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 PCDHA8Q9Y5H6 950 aa13.1□□□□□ -0.31
PDZRN3-203ENST00000462146 GOLGA6CA6NDK9 693 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 NCK2O43639 380 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 GOLGA6DP0CG33 693 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 PLCG1P19174 1290 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 CCT5P48643 541 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 VAV2P52735 878 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 ZBED6P86452 979 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 PDE4DQ08499 809 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 DNAJC21Q5F1R6 531 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 INTS5Q6P9B9 1019 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 FAM76AQ8TAV0 307 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 NOC4LQ9BVI4 516 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 ZNHIT6Q9NWK9 470 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 BTG4Q9NY30 223 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 GOLGA6AQ9NYA3 693 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 DOT1LQ8TEK3 1739 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 FLT1P17948 1338 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 CCDC194A0A1B0GVG4 234 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 M0R2N6 131 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 MECOMQ03112 1051 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 ZNF662Q6ZS27 426 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 TSEN2Q8NCE0 465 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 EHBP1Q8NDI1 1231 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 P2RX5Q93086 422 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 RPGRIP1Q96KN7 1286 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 CPVLQ9H3G5 476 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 EFCC1Q9HA90 598 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 POLD4Q9HCU8 107 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 ARHGAP20Q9P2F6 1191 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 SNX12Q9UMY4 172 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 ROBO1Q9Y6N7 1651 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 ANO9A1A5B4 782 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 SHOX2O60902 331 aaPredicted RBP13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 CAMTA2O94983 1202 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 IPO7O95373 1038 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 ATP2B2Q01814 1243 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 KIF5AQ12840 1032 aa13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 NSUN4Q96CB9 384 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 FAM84BQ96KN1 310 aaPredicted RBP13.09□□□□□ -0.31
PDZRN3-203ENST00000462146 NUTM2BA6NNL0 878 aaPredicted RBP13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 NUTM2EB1AL46 878 aaPredicted RBP13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 ORC4O43929 436 aa13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 ANKRD13CQ8N6S4 541 aa13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 IL17RBQ9NRM6 502 aa13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 SALL4Q9UJQ4 1053 aa13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 FAM184BQ9ULE4 1060 aa13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 CYTH3O43739 400 aa13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 USP17L8P0C7I0 530 aa13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 CCNE1P24864 410 aa13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 PRDX5P30044 214 aa13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 IRAK1P51617 712 aa13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 TXNRD1Q16881 649 aa13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 HEATR3Q7Z4Q2 680 aa13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 C2CD5Q86YS7 1000 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms