RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 SIRT2Q8IXJ6 389 aa20.59■□□□□ 0.89
UBE2D4-209ENST00000454428 KHSRPQ92945 711 aaKnown RBP eCLIP20.59■□□□□ 0.89
UBE2D4-209ENST00000454428 MKL1Q969V6 931 aa20.59■□□□□ 0.89
UBE2D4-209ENST00000454428 DDRGK1Q96HY6 314 aa20.59■□□□□ 0.89
UBE2D4-209ENST00000454428 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.59■□□□□ 0.89
UBE2D4-209ENST00000454428 A1CFQ9NQ94 594 aaKnown RBP20.59■□□□□ 0.89
UBE2D4-209ENST00000454428 PDGFCQ9NRA1 345 aa20.59■□□□□ 0.89
UBE2D4-209ENST00000454428 HOMER2Q9NSB8 354 aa20.59■□□□□ 0.89
UBE2D4-209ENST00000454428 FEM1BQ9UK73 627 aa20.59■□□□□ 0.89
UBE2D4-209ENST00000454428 ZNF536O15090 1300 aa20.58■□□□□ 0.89
UBE2D4-209ENST00000454428 TLL1O43897 1013 aa20.58■□□□□ 0.89
UBE2D4-209ENST00000454428 CA3P07451 260 aa20.58■□□□□ 0.89
UBE2D4-209ENST00000454428 TAPT1Q6NXT6 567 aa20.58■□□□□ 0.89
UBE2D4-209ENST00000454428 RPUSD2Q8IZ73 545 aaKnown RBP20.58■□□□□ 0.89
UBE2D4-209ENST00000454428 STRBPQ96SI9 672 aaKnown RBP20.58■□□□□ 0.89
UBE2D4-209ENST00000454428 C11orf16Q9NQ32 467 aa20.58■□□□□ 0.89
UBE2D4-209ENST00000454428 ZBBXA8MT70 800 aa20.57■□□□□ 0.88
UBE2D4-209ENST00000454428 GSG1L2A8MUP6 293 aa20.57■□□□□ 0.88
UBE2D4-209ENST00000454428 DYNC1LI2O43237 492 aaPredicted RBP20.57■□□□□ 0.88
UBE2D4-209ENST00000454428 SKIV2LQ15477 1246 aaKnown RBP20.57■□□□□ 0.88
UBE2D4-209ENST00000454428 NOL8Q76FK4 1167 aaKnown RBP20.57■□□□□ 0.88
UBE2D4-209ENST00000454428 PANK1Q8TE04 598 aa20.57■□□□□ 0.88
UBE2D4-209ENST00000454428 CEP95Q96GE4 821 aa20.57■□□□□ 0.88
UBE2D4-209ENST00000454428 BCL11AQ9H165 835 aa20.57■□□□□ 0.88
UBE2D4-209ENST00000454428 ALDH8A1Q9H2A2 487 aaPredicted RBP20.57■□□□□ 0.88
UBE2D4-209ENST00000454428 ACAD9Q9H845 621 aa20.57■□□□□ 0.88
UBE2D4-209ENST00000454428 CERS4Q9HA82 394 aa20.57■□□□□ 0.88
UBE2D4-209ENST00000454428 CTDP1Q9Y5B0 961 aaPredicted RBP20.57■□□□□ 0.88
UBE2D4-209ENST00000454428 PIEZO1Q92508 2521 aa20.57■□□□□ 0.88
UBE2D4-209ENST00000454428 LRRC47Q8N1G4 583 aaKnown RBP20.56■□□□□ 0.88
UBE2D4-209ENST00000454428 SEZ6LQ9BYH1 1024 aa20.56■□□□□ 0.88
UBE2D4-209ENST00000454428 MKNK2Q9HBH9 465 aa20.56■□□□□ 0.88
UBE2D4-209ENST00000454428 TRMT13Q9NUP7 481 aaKnown RBP20.56■□□□□ 0.88
UBE2D4-209ENST00000454428 MTMR4Q9NYA4 1195 aa20.56■□□□□ 0.88
UBE2D4-209ENST00000454428 BRWD1Q9NSI6 2320 aa20.56■□□□□ 0.88
UBE2D4-209ENST00000454428 PTPRSQ13332 1948 aa20.55■□□□□ 0.88
UBE2D4-209ENST00000454428 CYP2C9P11712 490 aa20.55■□□□□ 0.88
UBE2D4-209ENST00000454428 TMEM67Q5HYA8 995 aa20.55■□□□□ 0.88
UBE2D4-209ENST00000454428 FBXO16Q8IX29 292 aaPredicted RBP20.55■□□□□ 0.88
UBE2D4-209ENST00000454428 GMCL1P1Q8NEA9 526 aa20.55■□□□□ 0.88
UBE2D4-209ENST00000454428 AP5M1Q9H0R1 490 aa20.55■□□□□ 0.88
UBE2D4-209ENST00000454428 EPB41L4AQ9HCS5 686 aaPredicted RBP20.55■□□□□ 0.88
UBE2D4-209ENST00000454428 RNF146Q9NTX7 359 aa20.55■□□□□ 0.88
UBE2D4-209ENST00000454428 COL4A4P53420 1690 aaPredicted RBP20.54■□□□□ 0.88
UBE2D4-209ENST00000454428 MUC6Q6W4X9 2439 aa20.54■□□□□ 0.88
UBE2D4-209ENST00000454428 ASB14A6NK59 587 aa20.54■□□□□ 0.88
UBE2D4-209ENST00000454428 PRDM1O75626 825 aa20.54■□□□□ 0.88
UBE2D4-209ENST00000454428 SPRED2Q7Z698 418 aa20.54■□□□□ 0.88
UBE2D4-209ENST00000454428 SYNPO2Q9UMS6 1093 aa20.54■□□□□ 0.88
UBE2D4-209ENST00000454428 COG5Q9UP83 839 aa20.54■□□□□ 0.88
UBE2D4-209ENST00000454428 Q9Y3F1 56 aa20.54■□□□□ 0.88
UBE2D4-209ENST00000454428 HCN4Q9Y3Q4 1203 aa20.54■□□□□ 0.88
UBE2D4-209ENST00000454428 TET1Q8NFU7 2136 aa20.54■□□□□ 0.88
UBE2D4-209ENST00000454428 MINDY4BA8MYZ0 360 aa20.53■□□□□ 0.88
UBE2D4-209ENST00000454428 CCER2I3L3R5 266 aa20.53■□□□□ 0.88
UBE2D4-209ENST00000454428 PFKMP08237 780 aa20.53■□□□□ 0.88
UBE2D4-209ENST00000454428 BMP3P12645 472 aa20.53■□□□□ 0.88
UBE2D4-209ENST00000454428 TAP1Q03518 808 aa20.53■□□□□ 0.88
UBE2D4-209ENST00000454428 TMEM31Q5JXX7 168 aa20.53■□□□□ 0.88
UBE2D4-209ENST00000454428 IQSEC1Q6DN90 963 aa20.53■□□□□ 0.88
UBE2D4-209ENST00000454428 GIMAP6Q6P9H5 292 aa20.53■□□□□ 0.88
UBE2D4-209ENST00000454428 EEPD1Q7L9B9 569 aa20.53■□□□□ 0.88
UBE2D4-209ENST00000454428 DEFB128Q7Z7B8 93 aa20.53■□□□□ 0.88
UBE2D4-209ENST00000454428 TANC1Q9C0D5 1861 aa20.53■□□□□ 0.88
UBE2D4-209ENST00000454428 PLIN4Q96Q06 1357 aa20.52■□□□□ 0.88
UBE2D4-209ENST00000454428 WDFY4Q6ZS81 3184 aa20.52■□□□□ 0.88
UBE2D4-209ENST00000454428 TMEM232C9JQI7 657 aa20.52■□□□□ 0.88
UBE2D4-209ENST00000454428 GTPBP6O43824 516 aaPredicted RBP20.52■□□□□ 0.88
UBE2D4-209ENST00000454428 ZEB2O60315 1214 aa20.52■□□□□ 0.88
UBE2D4-209ENST00000454428 LPXNO60711 386 aa20.52■□□□□ 0.88
UBE2D4-209ENST00000454428 MUM1L1Q5H9M0 696 aa20.52■□□□□ 0.88
UBE2D4-209ENST00000454428 SLFN13Q68D06 897 aa20.52■□□□□ 0.88
UBE2D4-209ENST00000454428 RPAP2Q8IXW5 612 aaPredicted RBP20.52■□□□□ 0.88
UBE2D4-209ENST00000454428 OSBP2Q969R2 916 aa20.52■□□□□ 0.88
UBE2D4-209ENST00000454428 PURBQ96QR8 312 aaKnown RBP20.52■□□□□ 0.88
UBE2D4-209ENST00000454428 COG6Q9Y2V7 657 aa20.52■□□□□ 0.88
UBE2D4-209ENST00000454428 SCN10AQ9Y5Y9 1956 aa20.52■□□□□ 0.87
UBE2D4-209ENST00000454428 TNKSO95271 1327 aa20.52■□□□□ 0.87
UBE2D4-209ENST00000454428 RAB11FIP3O75154 756 aa20.51■□□□□ 0.87
UBE2D4-209ENST00000454428 TTLL1O95922 423 aa20.51■□□□□ 0.87
UBE2D4-209ENST00000454428 ZSCAN25Q6NSZ9 544 aa20.51■□□□□ 0.87
UBE2D4-209ENST00000454428 MORC4Q8TE76 937 aa20.51■□□□□ 0.87
UBE2D4-209ENST00000454428 ARNTL2Q8WYA1 636 aa20.51■□□□□ 0.87
UBE2D4-209ENST00000454428 TRERF1Q96PN7 1200 aa20.51■□□□□ 0.87
UBE2D4-209ENST00000454428 CD320Q9NPF0 282 aa20.51■□□□□ 0.87
UBE2D4-209ENST00000454428 CYP39A1Q9NYL5 469 aa20.51■□□□□ 0.87
UBE2D4-209ENST00000454428 FAM86C2PA6NEL3 165 aa20.5■□□□□ 0.87
UBE2D4-209ENST00000454428 GPR37L1O60883 481 aa20.5■□□□□ 0.87
UBE2D4-209ENST00000454428 FDX1P10109 184 aa20.5■□□□□ 0.87
UBE2D4-209ENST00000454428 STAT2P52630 851 aa20.5■□□□□ 0.87
UBE2D4-209ENST00000454428 SNAP25P60880 206 aa20.5■□□□□ 0.87
UBE2D4-209ENST00000454428 PURAQ00577 322 aaKnown RBP20.5■□□□□ 0.87
UBE2D4-209ENST00000454428 GRB10Q13322 594 aa20.5■□□□□ 0.87
UBE2D4-209ENST00000454428 ALAS1P13196 640 aa20.49■□□□□ 0.87
UBE2D4-209ENST00000454428 TKFCQ3LXA3 575 aa20.49■□□□□ 0.87
UBE2D4-209ENST00000454428 DUSP28Q4G0W2 176 aa20.49■□□□□ 0.87
UBE2D4-209ENST00000454428 HERC6Q8IVU3 1022 aa20.49■□□□□ 0.87
UBE2D4-209ENST00000454428 ZNF444Q8N0Y2 327 aaPredicted RBP20.49■□□□□ 0.87
UBE2D4-209ENST00000454428 PPP1R13LQ8WUF5 828 aa20.49■□□□□ 0.87
UBE2D4-209ENST00000454428 HLA-CQ95604 372 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms