RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 USP17L15C9J2P7 530 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 USP17L13C9JLJ4 530 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 USP17L11C9JVI0 530 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 USP17L18D6R9N7 530 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 USP17L22D6RA61 530 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 USP17L17D6RBQ6 530 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 USP17L19D6RCP7 530 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 USP17L20D6RJB6 530 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 KLRC4O43908 158 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 TXLNAP40222 546 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 USP17L24Q0WX57 530 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 USP17L6PQ6QN14 398 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 TBC1D22AQ8WUA7 517 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 JMJD4Q9H9V9 463 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 SH3GLB2Q9NR46 395 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 OR52Z1P0C646 297 aa16.67■□□□□ 0.26
SF1-211ENST00000448404 JAG1P78504 1218 aa16.67■□□□□ 0.26
SF1-211ENST00000448404 NEK8Q86SG6 692 aa16.67■□□□□ 0.26
SF1-211ENST00000448404 COA1Q9GZY4 146 aa16.67■□□□□ 0.26
SF1-211ENST00000448404 POLD4Q9HCU8 107 aa16.67■□□□□ 0.26
SF1-211ENST00000448404 MYH1P12882 1939 aa16.67■□□□□ 0.26
SF1-211ENST00000448404 KCNJ18B7U540 433 aa16.67■□□□□ 0.26
SF1-211ENST00000448404 PLCG2P16885 1265 aa16.67■□□□□ 0.26
SF1-211ENST00000448404 RAD51AP2Q09MP3 1159 aa16.67■□□□□ 0.26
SF1-211ENST00000448404 KCNJ12Q14500 433 aa16.67■□□□□ 0.26
SF1-211ENST00000448404 ARL6IP4Q66PJ3 421 aaKnown RBP16.67■□□□□ 0.26
SF1-211ENST00000448404 KCNK18Q7Z418 384 aa16.67■□□□□ 0.26
SF1-211ENST00000448404 FAM163AQ96GL9 167 aaPredicted RBP16.67■□□□□ 0.26
SF1-211ENST00000448404 SRRTQ9BXP5 876 aaKnown RBP16.67■□□□□ 0.26
SF1-211ENST00000448404 C6orf50Q9HD87 102 aa16.67■□□□□ 0.26
SF1-211ENST00000448404 SLC39A2Q9NP94 309 aa16.67■□□□□ 0.26
SF1-211ENST00000448404 KLRG2A4D1S0 409 aaPredicted RBP16.66■□□□□ 0.26
SF1-211ENST00000448404 AKR1B15C9JRZ8 316 aaPredicted RBP16.66■□□□□ 0.26
SF1-211ENST00000448404 NRDCO43847 1150 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 CRKP46108 304 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 ZNF658Q5TYW1 1059 aaPredicted RBP16.66■□□□□ 0.26
SF1-211ENST00000448404 FBXO38Q6PIJ6 1188 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 CARD6Q9BX69 1037 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 ZNF287Q9HBT7 754 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 BRWD3Q6RI45 1802 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 ARHGAP6O43182 974 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 KIF20AO95235 890 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 ASIC1P78348 528 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 CACNB1Q02641 598 aaPredicted RBP16.66■□□□□ 0.26
SF1-211ENST00000448404 MCM6Q14566 821 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 AOC3Q16853 763 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 PPFIBP1Q86W92 1011 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 CCDC34Q96HJ3 373 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 ZFP91Q96JP5 570 aaPredicted RBP16.66■□□□□ 0.26
SF1-211ENST00000448404 COPB1P53618 953 aaKnown RBP16.66■□□□□ 0.26
SF1-211ENST00000448404 UBXN1Q04323 297 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 LRRC41Q15345 812 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 ECM1Q16610 540 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 SH3BP5LQ7L8J4 393 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 SPICE1Q8N0Z3 855 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 CHP1Q99653 195 aa16.66■□□□□ 0.26
SF1-211ENST00000448404 SLU7O95391 586 aaKnown RBP16.65■□□□□ 0.26
SF1-211ENST00000448404 PBX1P40424 430 aa16.65■□□□□ 0.26
SF1-211ENST00000448404 TCP11X2Q5H9J9 407 aa16.65■□□□□ 0.26
SF1-211ENST00000448404 C2CD5Q86YS7 1000 aa16.65■□□□□ 0.26
SF1-211ENST00000448404 TRIM47Q96LD4 638 aa16.65■□□□□ 0.26
SF1-211ENST00000448404 TRIM10Q9UDY6 481 aa16.65■□□□□ 0.26
SF1-211ENST00000448404 ERVK-24P63145 666 aa16.65■□□□□ 0.26
SF1-211ENST00000448404 PDE4DQ08499 809 aa16.65■□□□□ 0.26
SF1-211ENST00000448404 TEKT1Q969V4 418 aa16.65■□□□□ 0.26
SF1-211ENST00000448404 TDRD3Q9H7E2 651 aaKnown RBP16.65■□□□□ 0.26
SF1-211ENST00000448404 PARP3Q9Y6F1 533 aa16.65■□□□□ 0.26
SF1-211ENST00000448404 NPR1P16066 1061 aa16.64■□□□□ 0.25
SF1-211ENST00000448404 SEPT2Q15019 361 aa16.64■□□□□ 0.25
SF1-211ENST00000448404 ADSSL1Q8N142 457 aa16.64■□□□□ 0.25
SF1-211ENST00000448404 DAGLBQ8NCG7 672 aa16.64■□□□□ 0.25
SF1-211ENST00000448404 RIOX1Q9H6W3 641 aa16.64■□□□□ 0.25
SF1-211ENST00000448404 TBC1D7Q9P0N9 293 aa16.64■□□□□ 0.25
SF1-211ENST00000448404 RWDD2AQ9UIY3 292 aa16.64■□□□□ 0.25
SF1-211ENST00000448404 B4DLN1 442 aa16.64■□□□□ 0.25
SF1-211ENST00000448404 SLF2Q8IX21 1173 aa16.64■□□□□ 0.25
SF1-211ENST00000448404 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
SF1-211ENST00000448404 ANKRD31Q8N7Z5 1873 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 MFAP3LO75121 409 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 TTLL1O95922 423 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 EEF2P13639 858 aaKnown RBP16.63■□□□□ 0.25
SF1-211ENST00000448404 ZNF543Q08ER8 600 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 USH1GQ495M9 461 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 KRT25Q7Z3Z0 450 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 CDAN1Q8IWY9 1227 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 NLGN1Q8N2Q7 840 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 P2RX7Q99572 595 aaKnown RBP16.63■□□□□ 0.25
SF1-211ENST00000448404 TRIM9Q9C026 710 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 KANSL2Q9H9L4 492 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 ST7Q9NRC1 585 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 KBTBD4Q9NVX7 518 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.63■□□□□ 0.251e-8■□□□□ 11.3
SF1-211ENST00000448404 SSBP05455 408 aaKnown RBP eCLIP16.63■□□□□ 0.25
SF1-211ENST00000448404 IDEP14735 1019 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 GNA11P29992 359 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 ADCY7P51828 1080 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 RRP1BQ14684 758 aaKnown RBP16.63■□□□□ 0.25
SF1-211ENST00000448404 CALCRLQ16602 461 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 ANKRD40Q6AI12 368 aa16.63■□□□□ 0.25
SF1-211ENST00000448404 SLF1Q9BQI6 1058 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms