RNA–Protein interactions for RNA: ENST00000448162.6

CCHCR1-207, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-207ENST00000448162 AGBL1Q96MI9 1066 aa23.3■■□□□ 1.32
CCHCR1-207ENST00000448162 MMP19Q99542 508 aa23.3■■□□□ 1.32
CCHCR1-207ENST00000448162 ANO2Q9NQ90 1003 aa23.3■■□□□ 1.32
CCHCR1-207ENST00000448162 DIS3Q9Y2L1 958 aaKnown RBP23.3■■□□□ 1.32
CCHCR1-207ENST00000448162 FRMPD2Q68DX3 1309 aaPredicted RBP23.3■■□□□ 1.32
CCHCR1-207ENST00000448162 KBTBD13C9JR72 458 aa23.29■■□□□ 1.32
CCHCR1-207ENST00000448162 GPATCH4Q5T3I0 446 aaKnown RBP23.29■■□□□ 1.32
CCHCR1-207ENST00000448162 SYDE2Q5VT97 1194 aa23.29■■□□□ 1.32
CCHCR1-207ENST00000448162 IGDCC4Q8TDY8 1250 aa23.29■■□□□ 1.32
CCHCR1-207ENST00000448162 UBAC1Q9BSL1 405 aa23.29■■□□□ 1.32
CCHCR1-207ENST00000448162 KAT14Q9H8E8 782 aa23.29■■□□□ 1.32
CCHCR1-207ENST00000448162 SENP2Q9HC62 589 aa23.29■■□□□ 1.32
CCHCR1-207ENST00000448162 GPCPD1Q9NPB8 672 aa23.29■■□□□ 1.32
CCHCR1-207ENST00000448162 PLXNA1Q9UIW2 1896 aa23.29■■□□□ 1.32
CCHCR1-207ENST00000448162 ITGB8P26012 769 aa23.28■■□□□ 1.32
CCHCR1-207ENST00000448162 SNAP25P60880 206 aa23.28■■□□□ 1.32
CCHCR1-207ENST00000448162 TSGA10IPQ3SY00 556 aa23.28■■□□□ 1.32
CCHCR1-207ENST00000448162 ZNF697Q5TEC3 545 aa23.28■■□□□ 1.32
CCHCR1-207ENST00000448162 CDX2Q99626 313 aaPredicted RBP23.28■■□□□ 1.32
CCHCR1-207ENST00000448162 MTA3Q9BTC8 594 aa23.28■■□□□ 1.32
CCHCR1-207ENST00000448162 SEMA6BQ9H3T3 888 aa23.28■■□□□ 1.32
CCHCR1-207ENST00000448162 ICAM1P05362 532 aa23.27■■□□□ 1.32
CCHCR1-207ENST00000448162 PGK2P07205 417 aa23.27■■□□□ 1.32
CCHCR1-207ENST00000448162 IKQ13123 557 aaPredicted RBP23.27■■□□□ 1.32
CCHCR1-207ENST00000448162 KCTD2Q14681 263 aa23.27■■□□□ 1.32
CCHCR1-207ENST00000448162 TKFCQ3LXA3 575 aa23.27■■□□□ 1.32
CCHCR1-207ENST00000448162 IFIT1BQ5T764 474 aaKnown RBP23.27■■□□□ 1.32
CCHCR1-207ENST00000448162 KCNB2Q92953 911 aa23.27■■□□□ 1.32
CCHCR1-207ENST00000448162 FERMT2Q96AC1 680 aa23.27■■□□□ 1.32
CCHCR1-207ENST00000448162 FGD4Q96M96 766 aa23.27■■□□□ 1.32
CCHCR1-207ENST00000448162 TTYH1Q9H313 450 aaPredicted RBP23.27■■□□□ 1.32
CCHCR1-207ENST00000448162 PRDM5Q9NQX1 630 aaPredicted RBP23.27■■□□□ 1.32
CCHCR1-207ENST00000448162 SLC5A4Q9NY91 659 aa23.27■■□□□ 1.32
CCHCR1-207ENST00000448162 FBXO40Q9UH90 709 aa23.27■■□□□ 1.32
CCHCR1-207ENST00000448162 GOLGA8HP0CJ92 632 aa23.26■■□□□ 1.31
CCHCR1-207ENST00000448162 CASC1Q6TDU7 716 aa23.26■■□□□ 1.31
CCHCR1-207ENST00000448162 RALYLQ86SE5 291 aaKnown RBP23.26■■□□□ 1.31
CCHCR1-207ENST00000448162 ISY1Q9ULR0 285 aaKnown RBP23.26■■□□□ 1.31
CCHCR1-207ENST00000448162 PHF24Q9UPV7 400 aa23.26■■□□□ 1.31
CCHCR1-207ENST00000448162 IFIT3O14879 490 aaKnown RBP23.25■■□□□ 1.31
CCHCR1-207ENST00000448162 TLE2Q04725 743 aa23.25■■□□□ 1.31
CCHCR1-207ENST00000448162 TROAPQ12815 778 aa23.25■■□□□ 1.31
CCHCR1-207ENST00000448162 ASPRV1Q53RT3 343 aa23.25■■□□□ 1.31
CCHCR1-207ENST00000448162 CHST3Q7LGC8 479 aa23.25■■□□□ 1.31
CCHCR1-207ENST00000448162 NRBP1Q9UHY1 535 aa23.25■■□□□ 1.31
CCHCR1-207ENST00000448162 CTDP1Q9Y5B0 961 aaPredicted RBP23.25■■□□□ 1.31
CCHCR1-207ENST00000448162 PALM3A6NDB9 673 aaPredicted RBP23.24■■□□□ 1.31
CCHCR1-207ENST00000448162 MYCNP04198 464 aaPredicted RBP23.24■■□□□ 1.31
CCHCR1-207ENST00000448162 TAL1P17542 331 aaPredicted RBP23.24■■□□□ 1.31
CCHCR1-207ENST00000448162 EPHB4P54760 987 aa23.24■■□□□ 1.31
CCHCR1-207ENST00000448162 SMAD3P84022 425 aaKnown RBP23.24■■□□□ 1.31
CCHCR1-207ENST00000448162 CCDC174Q6PII3 467 aa23.24■■□□□ 1.31
CCHCR1-207ENST00000448162 MAMDC4Q6UXC1 1216 aa23.24■■□□□ 1.31
CCHCR1-207ENST00000448162 RASEFQ8IZ41 740 aa23.24■■□□□ 1.31
CCHCR1-207ENST00000448162 TRERF1Q96PN7 1200 aa23.24■■□□□ 1.31
CCHCR1-207ENST00000448162 CPVLQ9H3G5 476 aa23.24■■□□□ 1.31
CCHCR1-207ENST00000448162 ACAD9Q9H845 621 aa23.24■■□□□ 1.31
CCHCR1-207ENST00000448162 RNF146Q9NTX7 359 aa23.24■■□□□ 1.31
CCHCR1-207ENST00000448162 MAD2L2Q9UI95 211 aa23.24■■□□□ 1.31
CCHCR1-207ENST00000448162 ZNF865P0CJ78 1059 aaPredicted RBP23.23■■□□□ 1.31
CCHCR1-207ENST00000448162 SLC35G1Q2M3R5 365 aa23.23■■□□□ 1.31
CCHCR1-207ENST00000448162 MUM1L1Q5H9M0 696 aa23.23■■□□□ 1.31
CCHCR1-207ENST00000448162 ZNF467Q7Z7K2 595 aaPredicted RBP23.23■■□□□ 1.31
CCHCR1-207ENST00000448162 STAG2Q8N3U4 1231 aa23.23■■□□□ 1.31
CCHCR1-207ENST00000448162 FAM133AQ8N9E0 248 aa23.23■■□□□ 1.31
CCHCR1-207ENST00000448162 TINF2Q9BSI4 451 aa23.23■■□□□ 1.31
CCHCR1-207ENST00000448162 UBA5Q9GZZ9 404 aa23.23■■□□□ 1.31
CCHCR1-207ENST00000448162 LY9Q9HBG7 655 aa23.23■■□□□ 1.31
CCHCR1-207ENST00000448162 A1CFQ9NQ94 594 aaKnown RBP23.23■■□□□ 1.31
CCHCR1-207ENST00000448162 XPNPEP3Q9NQH7 507 aa23.23■■□□□ 1.31
CCHCR1-207ENST00000448162 GPHNQ9NQX3 736 aaPredicted RBP23.23■■□□□ 1.31
CCHCR1-207ENST00000448162 WDR19Q8NEZ3 1342 aa23.23■■□□□ 1.31
CCHCR1-207ENST00000448162 TTC28Q96AY4 2481 aa23.22■■□□□ 1.31
CCHCR1-207ENST00000448162 LCTP09848 1927 aa23.22■■□□□ 1.31
CCHCR1-207ENST00000448162 MSL3Q8N5Y2 521 aaKnown RBP23.22■■□□□ 1.31
CCHCR1-207ENST00000448162 MTMR8Q96EF0 704 aa23.22■■□□□ 1.31
CCHCR1-207ENST00000448162 CCPG1Q9ULG6 757 aa23.22■■□□□ 1.31
CCHCR1-207ENST00000448162 PGK1P00558 417 aa23.21■■□□□ 1.31
CCHCR1-207ENST00000448162 PARP1P09874 1014 aaKnown RBP23.21■■□□□ 1.31
CCHCR1-207ENST00000448162 ALAS1P13196 640 aa23.21■■□□□ 1.31
CCHCR1-207ENST00000448162 MCM5P33992 734 aa23.21■■□□□ 1.31
CCHCR1-207ENST00000448162 WTAPQ15007 396 aa23.21■■□□□ 1.31
CCHCR1-207ENST00000448162 TMEM67Q5HYA8 995 aa23.21■■□□□ 1.31
CCHCR1-207ENST00000448162 ADGRF4Q8IZF3 695 aa23.21■■□□□ 1.31
CCHCR1-207ENST00000448162 CLEC4DQ8WXI8 215 aa23.21■■□□□ 1.31
CCHCR1-207ENST00000448162 DDX11Q96FC9 970 aa23.21■■□□□ 1.31
CCHCR1-207ENST00000448162 JMJD4Q9H9V9 463 aa23.21■■□□□ 1.31
CCHCR1-207ENST00000448162 HOMER2Q9NSB8 354 aa23.21■■□□□ 1.31
CCHCR1-207ENST00000448162 SH2B2O14492 632 aaPredicted RBP23.2■■□□□ 1.3
CCHCR1-207ENST00000448162 PRC1O43663 620 aa23.2■■□□□ 1.3
CCHCR1-207ENST00000448162 ADAMTS4O75173 837 aa23.2■■□□□ 1.3
CCHCR1-207ENST00000448162 RARBP10826 455 aa23.2■■□□□ 1.3
CCHCR1-207ENST00000448162 SLC4A3P48751 1232 aa23.2■■□□□ 1.3
CCHCR1-207ENST00000448162 GRM4Q14833 912 aa23.2■■□□□ 1.3
CCHCR1-207ENST00000448162 SART3Q15020 963 aaKnown RBP23.2■■□□□ 1.3
CCHCR1-207ENST00000448162 RNF20Q5VTR2 975 aa23.2■■□□□ 1.3
CCHCR1-207ENST00000448162 ANKRD35Q8N283 1001 aa23.2■■□□□ 1.3
CCHCR1-207ENST00000448162 MAFAQ8NHW3 353 aaPredicted RBP23.2■■□□□ 1.3
CCHCR1-207ENST00000448162 MYLIPQ8WY64 445 aa23.2■■□□□ 1.3
CCHCR1-207ENST00000448162 LENG1Q96BZ8 264 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms