RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 FILIP1LQ4L180 1135 aa21.15■□□□□ 0.98
PMPCB-204ENST00000444457 GSDMAQ96QA5 445 aa21.15■□□□□ 0.98
PMPCB-204ENST00000444457 ABHD10Q9NUJ1 306 aa21.15■□□□□ 0.98
PMPCB-204ENST00000444457 RTCBQ9Y3I0 505 aaKnown RBP21.15■□□□□ 0.98
PMPCB-204ENST00000444457 TAF1LQ8IZX4 1826 aa21.15■□□□□ 0.98
PMPCB-204ENST00000444457 SYNRGQ9UMZ2 1314 aa21.15■□□□□ 0.98
PMPCB-204ENST00000444457 NHSQ6T4R5 1651 aa21.15■□□□□ 0.98
PMPCB-204ENST00000444457 VEGFAP15692 232 aaPredicted RBP21.15■□□□□ 0.98
PMPCB-204ENST00000444457 INPP5BP32019 993 aa21.15■□□□□ 0.98
PMPCB-204ENST00000444457 KIF5BP33176 963 aa21.15■□□□□ 0.98
PMPCB-204ENST00000444457 SLC4A8Q2Y0W8 1093 aa21.15■□□□□ 0.98
PMPCB-204ENST00000444457 CYP26C1Q6V0L0 522 aa21.15■□□□□ 0.98
PMPCB-204ENST00000444457 GBP6Q6ZN66 633 aa21.15■□□□□ 0.98
PMPCB-204ENST00000444457 AMIGO3Q86WK7 504 aa21.15■□□□□ 0.98
PMPCB-204ENST00000444457 RPGRIP1Q96KN7 1286 aa21.15■□□□□ 0.98
PMPCB-204ENST00000444457 CAPS2Q9BXY5 557 aa21.15■□□□□ 0.98
PMPCB-204ENST00000444457 A1CFQ9NQ94 594 aaKnown RBP21.15■□□□□ 0.98
PMPCB-204ENST00000444457 CD44P16070 742 aaKnown RBP21.14■□□□□ 0.97
PMPCB-204ENST00000444457 CUL4BQ13620 913 aa21.14■□□□□ 0.97
PMPCB-204ENST00000444457 BCAS4Q8TDM0 211 aa21.14■□□□□ 0.97
PMPCB-204ENST00000444457 SELENOOQ9BVL4 669 aa21.14■□□□□ 0.97
PMPCB-204ENST00000444457 SHTN1A0MZ66 631 aa21.14■□□□□ 0.97
PMPCB-204ENST00000444457 ARHGEF1Q92888 912 aaKnown RBP21.14■□□□□ 0.97
PMPCB-204ENST00000444457 MMS19Q96T76 1030 aa21.14■□□□□ 0.97
PMPCB-204ENST00000444457 CCNL1Q9UK58 526 aaPredicted RBP21.14■□□□□ 0.97
PMPCB-204ENST00000444457 C12orf60Q5U649 245 aa21.13■□□□□ 0.97
PMPCB-204ENST00000444457 KLHL10Q6JEL2 608 aa21.13■□□□□ 0.97
PMPCB-204ENST00000444457 NAV1Q8NEY1 1877 aa21.13■□□□□ 0.97
PMPCB-204ENST00000444457 ADAMTS3O15072 1205 aa21.12■□□□□ 0.97
PMPCB-204ENST00000444457 TFAP4Q01664 338 aa21.12■□□□□ 0.97
PMPCB-204ENST00000444457 LDHBP07195 334 aaKnown RBP21.12■□□□□ 0.97
PMPCB-204ENST00000444457 MCM7P33993 719 aa21.12■□□□□ 0.97
PMPCB-204ENST00000444457 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.12■□□□□ 0.97
PMPCB-204ENST00000444457 DGKHQ86XP1 1220 aa21.12■□□□□ 0.97
PMPCB-204ENST00000444457 SLF1Q9BQI6 1058 aa21.12■□□□□ 0.97
PMPCB-204ENST00000444457 TACO1Q9BSH4 297 aaKnown RBP21.12■□□□□ 0.97
PMPCB-204ENST00000444457 IL17RBQ9NRM6 502 aa21.12■□□□□ 0.97
PMPCB-204ENST00000444457 XDHP47989 1333 aa21.12■□□□□ 0.97
PMPCB-204ENST00000444457 GOLGA6BA6NDN3 693 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 MYBL2P10244 700 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 NT5C2P49902 561 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 STX17P56962 302 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 DDR1Q08345 913 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 PAPD7Q5XG87 772 aaKnown RBP21.11■□□□□ 0.97
PMPCB-204ENST00000444457 CCNI2Q6ZMN8 369 aaPredicted RBP21.11■□□□□ 0.97
PMPCB-204ENST00000444457 WDR66Q8TBY9 1149 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 SH3GL2Q99962 352 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 ANKIB1Q9P2G1 1089 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 SUFUQ9UMX1 484 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 SAR1BQ9Y6B6 198 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 ROBO3Q96MS0 1386 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 CALML3P27482 149 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 SF3B2Q13435 895 aaKnown RBP21.11■□□□□ 0.97
PMPCB-204ENST00000444457 SLC51AQ86UW1 340 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 SMYD4Q8IYR2 804 aaPredicted RBP21.11■□□□□ 0.97
PMPCB-204ENST00000444457 PNMA1Q8ND90 353 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 BANK1Q8NDB2 785 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 GDAP1L1Q96MZ0 367 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 EHD4Q9H223 541 aa21.11■□□□□ 0.97
PMPCB-204ENST00000444457 PPP1R3GB7ZBB8 358 aa21.1■□□□□ 0.97
PMPCB-204ENST00000444457 CKAP4Q07065 602 aaKnown RBP21.1■□□□□ 0.97
PMPCB-204ENST00000444457 IL17AQ16552 155 aa21.1■□□□□ 0.97
PMPCB-204ENST00000444457 SH3RF3Q8TEJ3 882 aaPredicted RBP21.1■□□□□ 0.97
PMPCB-204ENST00000444457 DYNLL2Q96FJ2 89 aa21.1■□□□□ 0.97
PMPCB-204ENST00000444457 HDAC6Q9UBN7 1215 aa21.1■□□□□ 0.97
PMPCB-204ENST00000444457 REXO2Q9Y3B8 237 aaKnown RBP21.1■□□□□ 0.97
PMPCB-204ENST00000444457 LY75O60449 1722 aa21.1■□□□□ 0.97
PMPCB-204ENST00000444457 FNTAP49354 379 aa21.1■□□□□ 0.97
PMPCB-204ENST00000444457 GRAPQ13588 217 aa21.1■□□□□ 0.97
PMPCB-204ENST00000444457 BLIDQ8IZY5 108 aa21.1■□□□□ 0.97
PMPCB-204ENST00000444457 GRAPLQ8TC17 118 aaPredicted RBP21.1■□□□□ 0.97
PMPCB-204ENST00000444457 ANKS1AQ92625 1134 aa21.1■□□□□ 0.97
PMPCB-204ENST00000444457 STAMQ92783 540 aa21.1■□□□□ 0.97
PMPCB-204ENST00000444457 CABS1Q96KC9 395 aa21.1■□□□□ 0.97
PMPCB-204ENST00000444457 PYM1Q9BRP8 204 aaKnown RBP21.1■□□□□ 0.97
PMPCB-204ENST00000444457 SH3GLB2Q9NR46 395 aa21.1■□□□□ 0.97
PMPCB-204ENST00000444457 LEMD3Q9Y2U8 911 aa21.1■□□□□ 0.97
PMPCB-204ENST00000444457 ATP1A1P05023 1023 aaKnown RBP21.09■□□□□ 0.97
PMPCB-204ENST00000444457 GNGT1P63211 74 aa21.09■□□□□ 0.97
PMPCB-204ENST00000444457 SETQ01105 290 aaPredicted RBP21.09■□□□□ 0.97
PMPCB-204ENST00000444457 TRIM14Q14142 442 aa21.09■□□□□ 0.97
PMPCB-204ENST00000444457 PDXDC2PQ6P474 469 aa21.09■□□□□ 0.97
PMPCB-204ENST00000444457 GSPT2Q8IYD1 628 aaKnown RBP21.09■□□□□ 0.97
PMPCB-204ENST00000444457 STAG2Q8N3U4 1231 aa21.09■□□□□ 0.97
PMPCB-204ENST00000444457 AENQ8WTP8 325 aaKnown RBP21.09■□□□□ 0.97
PMPCB-204ENST00000444457 GPKOWQ92917 476 aaPredicted RBP eCLIP21.09■□□□□ 0.97
PMPCB-204ENST00000444457 ZNF622Q969S3 477 aaKnown RBP eCLIP21.09■□□□□ 0.974e-7■□□□□ 9.1
PMPCB-204ENST00000444457 GUCA1BQ9UMX6 200 aa21.09■□□□□ 0.97
PMPCB-204ENST00000444457 FAM205AQ6ZU69 1335 aa21.09■□□□□ 0.97
PMPCB-204ENST00000444457 CDK5RAP2Q96SN8 1893 aa21.09■□□□□ 0.97
PMPCB-204ENST00000444457 GOLGA8KD6RF30 607 aa21.09■□□□□ 0.97
PMPCB-204ENST00000444457 RNF225M0QZC1 329 aaPredicted RBP21.09■□□□□ 0.97
PMPCB-204ENST00000444457 ENC1O14682 589 aa21.09■□□□□ 0.97
PMPCB-204ENST00000444457 GRM4Q14833 912 aa21.09■□□□□ 0.97
PMPCB-204ENST00000444457 ARL6IP4Q66PJ3 421 aaKnown RBP21.09■□□□□ 0.97
PMPCB-204ENST00000444457 HAUS4Q9H6D7 363 aa21.09■□□□□ 0.97
PMPCB-204ENST00000444457 TRIM10Q9UDY6 481 aa21.09■□□□□ 0.97
PMPCB-204ENST00000444457 FSBPO95073 299 aa21.08■□□□□ 0.97
PMPCB-204ENST00000444457 FAM184BQ9ULE4 1060 aa21.08■□□□□ 0.97
PMPCB-204ENST00000444457 PCDHA4Q9UN74 947 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms