RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 MSCO60682 206 aa14.93□□□□□ -0.02
GPC1-204ENST00000426280 ADCYAP1R1P41586 468 aa14.93□□□□□ -0.02
GPC1-204ENST00000426280 ACVR2BQ13705 512 aa14.93□□□□□ -0.02
GPC1-204ENST00000426280 NECTIN1Q15223 517 aa14.93□□□□□ -0.02
GPC1-204ENST00000426280 TKFCQ3LXA3 575 aa14.93□□□□□ -0.02
GPC1-204ENST00000426280 BMP2KLQ5H9B9 411 aa14.93□□□□□ -0.02
GPC1-204ENST00000426280 IGDCC4Q8TDY8 1250 aa14.93□□□□□ -0.02
GPC1-204ENST00000426280 CNNM2Q9H8M5 875 aa14.93□□□□□ -0.02
GPC1-204ENST00000426280 JMJD4Q9H9V9 463 aa14.93□□□□□ -0.02
GPC1-204ENST00000426280 RBM27Q9P2N5 1060 aaKnown RBP14.93□□□□□ -0.02
GPC1-204ENST00000426280 ZHX1Q9UKY1 873 aaPredicted RBP14.93□□□□□ -0.02
GPC1-204ENST00000426280 LCTP09848 1927 aa14.93□□□□□ -0.02
GPC1-204ENST00000426280 SYNGAP1Q96PV0 1343 aa14.92□□□□□ -0.02
GPC1-204ENST00000426280 SLC27A2O14975 620 aa14.92□□□□□ -0.02
GPC1-204ENST00000426280 ADAMTS4O75173 837 aa14.92□□□□□ -0.02
GPC1-204ENST00000426280 CCDC144BQ3MJ40 725 aa14.92□□□□□ -0.02
GPC1-204ENST00000426280 USH1GQ495M9 461 aa14.92□□□□□ -0.02
GPC1-204ENST00000426280 CCDC178Q5BJE1 867 aa14.92□□□□□ -0.02
GPC1-204ENST00000426280 IFIT1BQ5T764 474 aaKnown RBP14.92□□□□□ -0.02
GPC1-204ENST00000426280 SLC30A10Q6XR72 485 aa14.92□□□□□ -0.02
GPC1-204ENST00000426280 EEPD1Q7L9B9 569 aa14.92□□□□□ -0.02
GPC1-204ENST00000426280 UBAC1Q9BSL1 405 aa14.92□□□□□ -0.02
GPC1-204ENST00000426280 XPNPEP3Q9NQH7 507 aa14.92□□□□□ -0.02
GPC1-204ENST00000426280 NRBP1Q9UHY1 535 aa14.92□□□□□ -0.02
GPC1-204ENST00000426280 MAD2L2Q9UI95 211 aa14.92□□□□□ -0.02
GPC1-204ENST00000426280 IFIT3O14879 490 aaKnown RBP14.91□□□□□ -0.02
GPC1-204ENST00000426280 CTAGE5O15320 804 aa14.91□□□□□ -0.02
GPC1-204ENST00000426280 PPP1R11O60927 126 aaPredicted RBP14.91□□□□□ -0.02
GPC1-204ENST00000426280 AKR1A1P14550 325 aa14.91□□□□□ -0.02
GPC1-204ENST00000426280 CDC37Q16543 378 aaPredicted RBP14.91□□□□□ -0.02
GPC1-204ENST00000426280 GPATCH4Q5T3I0 446 aaKnown RBP14.91□□□□□ -0.02
GPC1-204ENST00000426280 CREB3L3Q68CJ9 461 aa14.91□□□□□ -0.02
GPC1-204ENST00000426280 CCSAPQ6IQ19 270 aaPredicted RBP14.91□□□□□ -0.02
GPC1-204ENST00000426280 TAPT1Q6NXT6 567 aa14.91□□□□□ -0.02
GPC1-204ENST00000426280 MSL3Q8N5Y2 521 aaKnown RBP14.91□□□□□ -0.02
GPC1-204ENST00000426280 ARRDC4Q8NCT1 418 aa14.91□□□□□ -0.02
GPC1-204ENST00000426280 NCOA7Q8NI08 942 aa14.91□□□□□ -0.02
GPC1-204ENST00000426280 COL20A1Q9P218 1284 aa14.91□□□□□ -0.02
GPC1-204ENST00000426280 CNPY2Q9Y2B0 182 aa14.91□□□□□ -0.02
GPC1-204ENST00000426280 GTF3C3Q9Y5Q9 886 aa14.91□□□□□ -0.02
GPC1-204ENST00000426280 NR2E3Q9Y5X4 410 aa14.91□□□□□ -0.02
GPC1-204ENST00000426280 SYNRGQ9UMZ2 1314 aa14.91□□□□□ -0.02
GPC1-204ENST00000426280 PALM3A6NDB9 673 aaPredicted RBP14.9□□□□□ -0.02
GPC1-204ENST00000426280 PARP1P09874 1014 aaKnown RBP14.9□□□□□ -0.02
GPC1-204ENST00000426280 CALML3P27482 149 aa14.9□□□□□ -0.02
GPC1-204ENST00000426280 QRICH1Q2TAL8 776 aa14.9□□□□□ -0.02
GPC1-204ENST00000426280 SLC39A5Q6ZMH5 540 aa14.9□□□□□ -0.02
GPC1-204ENST00000426280 RASEFQ8IZ41 740 aa14.9□□□□□ -0.02
GPC1-204ENST00000426280 KLHDC9Q8NEP7 349 aa14.9□□□□□ -0.02
GPC1-204ENST00000426280 MYL10Q9BUA6 226 aa14.9□□□□□ -0.02
GPC1-204ENST00000426280 FAM184BQ9ULE4 1060 aa14.9□□□□□ -0.02
GPC1-204ENST00000426280 MCM3APO60318 1980 aa14.9□□□□□ -0.02
GPC1-204ENST00000426280 PTPDC1A2A3K4 754 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 KLRF2D3W0D1 207 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 OPLAHO14841 1288 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 CYTH3O43739 400 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 RARBP10826 455 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 SMPD1P17405 629 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 RTP1P59025 263 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 RPS6P62753 249 aaKnown RBP14.89□□□□□ -0.03
GPC1-204ENST00000426280 TROAPQ12815 778 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 ASPRV1Q53RT3 343 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 SH3RF1Q7Z6J0 888 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 MORC4Q8TE76 937 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 MTMR8Q96EF0 704 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 GDF15Q99988 308 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 LRRC2Q9BYS8 371 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 ABHD16BQ9H3Z7 469 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 LY9Q9HBG7 655 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 ANO2Q9NQ90 1003 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 PHF24Q9UPV7 400 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 WDR19Q8NEZ3 1342 aa14.89□□□□□ -0.03
GPC1-204ENST00000426280 NT5C2P49902 561 aa14.88□□□□□ -0.03
GPC1-204ENST00000426280 FXR1P51114 621 aaKnown RBP eCLIP14.88□□□□□ -0.03
GPC1-204ENST00000426280 ALDH5A1P51649 535 aaPredicted RBP14.88□□□□□ -0.03
GPC1-204ENST00000426280 TRDNQ13061 729 aa14.88□□□□□ -0.03
GPC1-204ENST00000426280 GRM4Q14833 912 aa14.88□□□□□ -0.03
GPC1-204ENST00000426280 RNF207Q6ZRF8 634 aa14.88□□□□□ -0.03
GPC1-204ENST00000426280 KIAA1211Q6ZU35 1233 aa14.88□□□□□ -0.03
GPC1-204ENST00000426280 RAB11FIP4Q86YS3 637 aa14.88□□□□□ -0.03
GPC1-204ENST00000426280 FBXO16Q8IX29 292 aaPredicted RBP14.88□□□□□ -0.03
GPC1-204ENST00000426280 TAAR1Q96RJ0 339 aa14.88□□□□□ -0.03
GPC1-204ENST00000426280 GNEQ9Y223 722 aaKnown RBP14.88□□□□□ -0.03
GPC1-204ENST00000426280 KBTBD13C9JR72 458 aa14.87□□□□□ -0.03
GPC1-204ENST00000426280 PRC1O43663 620 aa14.87□□□□□ -0.03
GPC1-204ENST00000426280 DUSP11O75319 330 aaKnown RBP14.87□□□□□ -0.03
GPC1-204ENST00000426280 ITGB8P26012 769 aa14.87□□□□□ -0.03
GPC1-204ENST00000426280 MAGEA10P43363 369 aaPredicted RBP14.87□□□□□ -0.03
GPC1-204ENST00000426280 BEX3Q00994 111 aa14.87□□□□□ -0.03
GPC1-204ENST00000426280 WTAPQ15007 396 aa14.87□□□□□ -0.03
GPC1-204ENST00000426280 KCNA10Q16322 511 aa14.87□□□□□ -0.03
GPC1-204ENST00000426280 ADCK5Q3MIX3 580 aa14.87□□□□□ -0.03
GPC1-204ENST00000426280 TRIM60Q495X7 471 aa14.87□□□□□ -0.03
GPC1-204ENST00000426280 TMEM67Q5HYA8 995 aa14.87□□□□□ -0.03
GPC1-204ENST00000426280 RALYLQ86SE5 291 aaKnown RBP14.87□□□□□ -0.03
GPC1-204ENST00000426280 PIGSQ96S52 555 aa14.87□□□□□ -0.03
GPC1-204ENST00000426280 UPF3AQ9H1J1 476 aaKnown RBP14.87□□□□□ -0.03
GPC1-204ENST00000426280 ATP11BQ9Y2G3 1177 aa14.87□□□□□ -0.03
GPC1-204ENST00000426280 LRRC37A2A6NM11 1700 aa14.86□□□□□ -0.03
GPC1-204ENST00000426280 A0A1W2PQ45 241 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms