RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 RNF41Q9H4P4 317 aaPredicted RBP11.12□□□□□ -0.63
NUP50-205ENST00000419387 PRDM5Q9NQX1 630 aaPredicted RBP11.12□□□□□ -0.63
NUP50-205ENST00000419387 PDLIM7Q9NR12 457 aa11.12□□□□□ -0.63
NUP50-205ENST00000419387 SYNRGQ9UMZ2 1314 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 SOWAHBA6NEL2 793 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 MOXD2PA6NHM9 499 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 ASB14A6NK59 587 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 HIP1O00291 1037 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 ZNF213O14771 459 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 SLC16A2P36021 539 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 ACLYP53396 1101 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 TLE2Q04725 743 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 KCNA10Q16322 511 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 CCDC144BQ3MJ40 725 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 MUM1L1Q5H9M0 696 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 SYDE2Q5VT97 1194 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 CCSAPQ6IQ19 270 aaPredicted RBP11.11□□□□□ -0.63
NUP50-205ENST00000419387 CWC27Q6UX04 472 aaKnown RBP11.11□□□□□ -0.63
NUP50-205ENST00000419387 SH3RF1Q7Z6J0 888 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 TBC1D10CQ8IV04 446 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 NUP133Q8WUM0 1156 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 KATNBL1Q9H079 304 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 RANBP17Q9H2T7 1088 aaKnown RBP11.11□□□□□ -0.63
NUP50-205ENST00000419387 SPC25Q9HBM1 224 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 DIAPH3Q9NSV4 1193 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 CCPG1Q9ULG6 757 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 SZT2Q5T011 3432 aa11.11□□□□□ -0.63
NUP50-205ENST00000419387 TRIM43BA6NCK2 446 aa11.1□□□□□ -0.63
NUP50-205ENST00000419387 ICAM1P05362 532 aa11.1□□□□□ -0.63
NUP50-205ENST00000419387 C6orf222P0C671 652 aaPredicted RBP11.1□□□□□ -0.63
NUP50-205ENST00000419387 CST5P28325 142 aaPredicted RBP11.1□□□□□ -0.63
NUP50-205ENST00000419387 GJA9P57773 515 aa11.1□□□□□ -0.63
NUP50-205ENST00000419387 IRX6P78412 446 aaPredicted RBP11.1□□□□□ -0.63
NUP50-205ENST00000419387 PCSK9Q8NBP7 692 aaKnown RBP11.1□□□□□ -0.63
NUP50-205ENST00000419387 ESR2Q92731 530 aa11.1□□□□□ -0.63
NUP50-205ENST00000419387 BADQ92934 168 aa11.1□□□□□ -0.63
NUP50-205ENST00000419387 TRIM43Q96BQ3 446 aaPredicted RBP11.1□□□□□ -0.63
NUP50-205ENST00000419387 KIF12Q96FN5 646 aa11.1□□□□□ -0.63
NUP50-205ENST00000419387 UPF3AQ9H1J1 476 aaKnown RBP11.1□□□□□ -0.63
NUP50-205ENST00000419387 GPCPD1Q9NPB8 672 aa11.1□□□□□ -0.63
NUP50-205ENST00000419387 STARD7Q9NQZ5 370 aa11.1□□□□□ -0.63
NUP50-205ENST00000419387 CYP39A1Q9NYL5 469 aa11.1□□□□□ -0.63
NUP50-205ENST00000419387 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
NUP50-205ENST00000419387 MYADML2A6NDP7 307 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 ADCY6O43306 1168 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 CLTBP09497 229 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 SNHG28P0DPA3 235 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 PDHBP11177 359 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 NT5C2P49902 561 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 IRX5P78411 483 aaPredicted RBP11.09□□□□□ -0.63
NUP50-205ENST00000419387 TNFAIP2Q03169 654 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 ZNF543Q08ER8 600 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 CCDC178Q5BJE1 867 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 NSMFQ6X4W1 530 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 DGKHQ86XP1 1220 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 DEFB123Q8N688 67 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 TOX2Q96NM4 488 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 DSCC1Q9BVC3 393 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 ELP1O95163 1332 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 NEDD4P46934 1319 aa11.09□□□□□ -0.63
NUP50-205ENST00000419387 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.08□□□□□ -0.64
NUP50-205ENST00000419387 DCDC2CA8MYV0 355 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 KIAA0355O15063 1070 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 PQBP1O60828 265 aaKnown RBP11.08□□□□□ -0.64
NUP50-205ENST00000419387 ASGR1P07306 291 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 ITGB8P26012 769 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 NKX3-2P78367 333 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 FAAP100Q0VG06 881 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 SHHQ15465 462 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 GNASQ5JWF2 1037 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 NOL8Q76FK4 1167 aaKnown RBP11.08□□□□□ -0.64
NUP50-205ENST00000419387 Q7L0L9 218 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 ANKRD33Q7Z3H0 272 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 VTI1AQ96AJ9 217 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 GLT1D1Q96MS3 346 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 ZKSCAN3Q9BRR0 538 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 SCUBE2Q9NQ36 999 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 TMEM39AQ9NV64 488 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 CTNNA3Q9UI47 895 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 PNMA2Q9UL42 364 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 ASTN1O14525 1302 aa11.08□□□□□ -0.64
NUP50-205ENST00000419387 CTAGE5O15320 804 aa11.07□□□□□ -0.64
NUP50-205ENST00000419387 KDM4AO75164 1064 aa11.07□□□□□ -0.64
NUP50-205ENST00000419387 RAG1P15918 1043 aa11.07□□□□□ -0.64
NUP50-205ENST00000419387 PDE4AP27815 886 aa11.07□□□□□ -0.64
NUP50-205ENST00000419387 CDK7P50613 346 aa11.07□□□□□ -0.64
NUP50-205ENST00000419387 BAATQ14032 418 aaPredicted RBP11.07□□□□□ -0.64
NUP50-205ENST00000419387 IMMTQ16891 758 aaKnown RBP11.07□□□□□ -0.64
NUP50-205ENST00000419387 C9orf50Q5SZB4 431 aa11.07□□□□□ -0.64
NUP50-205ENST00000419387 GPATCH4Q5T3I0 446 aaKnown RBP11.07□□□□□ -0.64
NUP50-205ENST00000419387 IQSEC1Q6DN90 963 aa11.07□□□□□ -0.64
NUP50-205ENST00000419387 TAPT1Q6NXT6 567 aa11.07□□□□□ -0.64
NUP50-205ENST00000419387 IQCA1Q86XH1 822 aa11.07□□□□□ -0.64
NUP50-205ENST00000419387 MORC4Q8TE76 937 aa11.07□□□□□ -0.64
NUP50-205ENST00000419387 ANKS1AQ92625 1134 aa11.07□□□□□ -0.64
NUP50-205ENST00000419387 PURBQ96QR8 312 aaKnown RBP11.07□□□□□ -0.64
NUP50-205ENST00000419387 ADD3Q9UEY8 706 aaKnown RBP11.07□□□□□ -0.64
NUP50-205ENST00000419387 GNEQ9Y223 722 aaKnown RBP11.07□□□□□ -0.64
NUP50-205ENST00000419387 DDX49Q9Y6V7 483 aaKnown RBP11.07□□□□□ -0.64
NUP50-205ENST00000419387 MROH7Q68CQ1 1323 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms