RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 LAMB3Q13751 1172 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 MEA1Q16626 185 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 DIS3L2Q8IYB7 885 aaKnown RBP14.17□□□□□ -0.14
HERC3-203ENST00000407637 MB21D1Q8N884 522 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 ZNF579Q8NAF0 562 aaKnown RBP14.17□□□□□ -0.14
HERC3-203ENST00000407637 MYL10Q9BUA6 226 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 BLZF1Q9H2G9 400 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 DNAJC5Q9H3Z4 198 aa14.17□□□□□ -0.14
HERC3-203ENST00000407637 PAPOLBQ9NRJ5 636 aaKnown RBP14.17□□□□□ -0.14
HERC3-203ENST00000407637 A6NHS1 94 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 CCT8L1PA6NM43 557 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 ZNF263O14978 683 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 TCP1P17987 556 aaKnown RBP14.16□□□□□ -0.14
HERC3-203ENST00000407637 ARID4AP29374 1257 aaPredicted RBP14.16□□□□□ -0.14
HERC3-203ENST00000407637 PAFAH1B1P43034 410 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 RFX5P48382 616 aaPredicted RBP14.16□□□□□ -0.14
HERC3-203ENST00000407637 CTCFP49711 727 aaPredicted RBP14.16□□□□□ -0.14
HERC3-203ENST00000407637 PAK1Q13153 545 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 SH3RF1Q7Z6J0 888 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 MFN1Q8IWA4 741 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 CNKSR1Q969H4 720 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 NEUROD6Q96NK8 337 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 GSDMAQ96QA5 445 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 TSC22D3Q99576 134 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 SLC26A6Q9BXS9 759 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 SLC12A4Q9UP95 1085 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 MYH1P12882 1939 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 METP08581 1390 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 H7C1W4 665 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 FGAP02671 866 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 ATP4AP20648 1035 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 DRD4P21917 467 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 ODF2Q5BJF6 829 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 NFXL1Q6ZNB6 911 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 NELFBQ8WX92 580 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 OSBPL1AQ9BXW6 950 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 STRN4Q9NRL3 753 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 ZFATQ9P243 1243 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 MAPK8IP1Q9UQF2 711 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 MYH6P13533 1939 aa14.16□□□□□ -0.14
HERC3-203ENST00000407637 PTPRUQ92729 1446 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 BTBD11A6QL63 1104 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 F8W031 263 aaPredicted RBP14.15□□□□□ -0.14
HERC3-203ENST00000407637 ARMC9Q7Z3E5 817 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 TRIM74Q86UV6 250 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 TRIM73Q86UV7 250 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 SPICE1Q8N0Z3 855 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 ZNF513Q8N8E2 541 aaPredicted RBP14.15□□□□□ -0.14
HERC3-203ENST00000407637 PRCCQ92733 491 aaPredicted RBP14.15□□□□□ -0.14
HERC3-203ENST00000407637 SH2D4AQ9H788 454 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 RWDD2AQ9UIY3 292 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 G3BP2Q9UN86 482 aaKnown RBP14.15□□□□□ -0.14
HERC3-203ENST00000407637 ANGEL1Q9UNK9 670 aaKnown RBP14.15□□□□□ -0.14
HERC3-203ENST00000407637 PARP4Q9UKK3 1724 aaKnown RBP14.15□□□□□ -0.14
HERC3-203ENST00000407637 MYH7BA7E2Y1 1941 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 SPDYE3A6NKU9 549 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 KLK7P49862 253 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 PPP2R2AP63151 447 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 NR5A1Q13285 461 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 APOA5Q6Q788 366 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 B4GALNT2Q8NHY0 566 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 EZH1Q92800 747 aaPredicted RBP14.15□□□□□ -0.14
HERC3-203ENST00000407637 TSGA10Q9BZW7 698 aa14.15□□□□□ -0.14
HERC3-203ENST00000407637 ZNHIT6Q9NWK9 470 aaKnown RBP14.15□□□□□ -0.14
HERC3-203ENST00000407637 LGALS16A8MUM7 142 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 DCDC2CA8MYV0 355 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 MAP3K13O43283 966 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 PARP1P09874 1014 aaKnown RBP14.14□□□□□ -0.15
HERC3-203ENST00000407637 PRLRP16471 622 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 GUCY1A2P33402 732 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 NTRK3Q16288 839 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 FAM133BQ5BKY9 247 aaKnown RBP14.14□□□□□ -0.15
HERC3-203ENST00000407637 KLHL23Q8NBE8 558 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 ZCWPW1Q9H0M4 648 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 LMCD1Q9NZU5 365 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 TOPAZ1Q8N9V7 1692 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 TRIM49BA6NDI0 452 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 IFIT3O14879 490 aaKnown RBP14.14□□□□□ -0.15
HERC3-203ENST00000407637 ZPR1O75312 459 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 MMP1P03956 469 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 PLEKP08567 350 aaPredicted RBP14.14□□□□□ -0.15
HERC3-203ENST00000407637 PAEPP09466 180 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 FERP16591 822 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 HSPA9P38646 679 aaKnown RBP14.14□□□□□ -0.15
HERC3-203ENST00000407637 DNA2P51530 1060 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 ROR2Q01974 943 aaKnown RBP14.14□□□□□ -0.15
HERC3-203ENST00000407637 ZNF844Q08AG5 666 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 MAP3K12Q12852 859 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 RILPL1Q5EBL4 403 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 MAEAQ7L5Y9 396 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 ERICH1Q86X53 443 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 CCDC197Q8NCU1 140 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 WHAMMQ8TF30 809 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 SYMPKQ92797 1274 aaKnown RBP14.14□□□□□ -0.15
HERC3-203ENST00000407637 PLCB1Q9NQ66 1216 aa14.14□□□□□ -0.15
HERC3-203ENST00000407637 SMIM24O75264 130 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 CLSTN1O94985 981 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 TRIM21P19474 475 aaKnown RBP14.13□□□□□ -0.15
HERC3-203ENST00000407637 HSD17B3P37058 310 aa14.13□□□□□ -0.15
HERC3-203ENST00000407637 RANBP1P43487 201 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms