RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 ZNF543Q08ER8 600 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 ADCK5Q3MIX3 580 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 TMEM67Q5HYA8 995 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 SNRNP48Q6IEG0 339 aaKnown RBP9.79□□□□□ -0.84
BRCC3-205ENST00000399026 TTBK2Q6IQ55 1244 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 CCDC174Q6PII3 467 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 GPR142Q7Z601 462 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 DGKHQ86XP1 1220 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 CCAR1Q8IX12 1150 aaKnown RBP9.79□□□□□ -0.84
BRCC3-205ENST00000399026 REPS2Q8NFH8 660 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 MOV10L1Q9BXT6 1211 aaKnown RBP9.79□□□□□ -0.84
BRCC3-205ENST00000399026 CPVLQ9H3G5 476 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 HOXC10Q9NYD6 342 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 FEM1BQ9UK73 627 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 CENPFP49454 3210 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 LCTP09848 1927 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 MYH6P13533 1939 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 ERICH2A1L162 156 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 MYCP01106 439 aaPredicted RBP9.78□□□□□ -0.84
BRCC3-205ENST00000399026 SNHG28P0DPA3 235 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 ELNP15502 786 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 ERCC3P19447 782 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 MAPK4P31152 587 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 HSPA4P34932 840 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 FLT3LGP49771 235 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 NT5C2P49902 561 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 CCNA1P78396 465 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 WTAPQ15007 396 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 ARHGEF6Q15052 776 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 CCDC178Q5BJE1 867 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 PLEKHH3Q7Z736 793 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 FAM160B2Q86V87 743 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 NCAPG2Q86XI2 1143 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 RAB11FIP4Q86YS3 637 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 CPXCR1Q8N123 301 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 MB21D1Q8N884 522 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 RAET1EQ8TD07 263 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 SH3TC2Q8TF17 1288 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 COA7Q96BR5 231 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 JAKMIP1Q96N16 626 aaKnown RBP9.78□□□□□ -0.84
BRCC3-205ENST00000399026 TTC14Q96N46 770 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 MTRQ99707 1265 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 MYL10Q9BUA6 226 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 LY9Q9HBG7 655 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 RAVER2Q9HCJ3 691 aaKnown RBP9.78□□□□□ -0.84
BRCC3-205ENST00000399026 HOMER2Q9NSB8 354 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 ZNF214Q9UL59 606 aaPredicted RBP9.78□□□□□ -0.84
BRCC3-205ENST00000399026 ADAMTS5Q9UNA0 930 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 CTDP1Q9Y5B0 961 aaPredicted RBP9.78□□□□□ -0.84
BRCC3-205ENST00000399026 SNX14Q9Y5W7 946 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 LRRC37A2A6NM11 1700 aa9.78□□□□□ -0.84
BRCC3-205ENST00000399026 SH2B2O14492 632 aaPredicted RBP9.77□□□□□ -0.85
BRCC3-205ENST00000399026 ZBED4O75132 1171 aa9.77□□□□□ -0.85
BRCC3-205ENST00000399026 GNRH1P01148 92 aa9.77□□□□□ -0.85
BRCC3-205ENST00000399026 ZKSCAN1P17029 563 aaPredicted RBP9.77□□□□□ -0.85
BRCC3-205ENST00000399026 CYP2B6P20813 491 aa9.77□□□□□ -0.85
BRCC3-205ENST00000399026 MCM5P33992 734 aa9.77□□□□□ -0.85
BRCC3-205ENST00000399026 SART3Q15020 963 aaKnown RBP9.77□□□□□ -0.85
BRCC3-205ENST00000399026 PKN2Q16513 984 aaKnown RBP9.77□□□□□ -0.85
BRCC3-205ENST00000399026 SLC9C1Q4G0N8 1177 aa9.77□□□□□ -0.85
BRCC3-205ENST00000399026 SYDE2Q5VT97 1194 aa9.77□□□□□ -0.85
BRCC3-205ENST00000399026 PRPF38AQ8NAV1 312 aaKnown RBP9.77□□□□□ -0.85
BRCC3-205ENST00000399026 ANKS1AQ92625 1134 aa9.77□□□□□ -0.85
BRCC3-205ENST00000399026 NEK1Q96PY6 1258 aa9.77□□□□□ -0.85
BRCC3-205ENST00000399026 SLC38A10Q9HBR0 1119 aa9.77□□□□□ -0.85
BRCC3-205ENST00000399026 PRR12Q9ULL5 1215 aa9.77□□□□□ -0.85
BRCC3-205ENST00000399026 RIPK3Q9Y572 518 aa9.77□□□□□ -0.85
BRCC3-205ENST00000399026 FRMPD3Q5JV73 1810 aa9.77□□□□□ -0.85
BRCC3-205ENST00000399026 CCDC85CA6NKD9 419 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 PARP1P09874 1014 aaKnown RBP9.76□□□□□ -0.85
BRCC3-205ENST00000399026 RXRAP19793 462 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 HOXD10P28358 340 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 STAT3P40763 770 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 C8orf34Q49A92 452 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 MORN1Q5T089 497 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 SMYD5Q6GMV2 418 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 NFXL1Q6ZNB6 911 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 RIOX2Q8IUF8 465 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 ZNF654Q8IZM8 581 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 STAG2Q8N3U4 1231 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 SHCBP1Q8NEM2 672 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 IGDCC4Q8TDY8 1250 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 CHURC1Q8WUH1 139 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 NUP133Q8WUM0 1156 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 SOCS4Q8WXH5 440 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 AGBL1Q96MI9 1066 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 APBA2Q99767 749 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 TEX13BQ9BXU2 312 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 USP26Q9BXU7 913 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 UBA5Q9GZZ9 404 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 IVNS1ABPQ9Y6Y0 642 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 ZNF536O15090 1300 aa9.76□□□□□ -0.85
BRCC3-205ENST00000399026 ZNFX1Q9P2E3 1918 aaKnown RBP9.76□□□□□ -0.85
BRCC3-205ENST00000399026 SMCHD1A6NHR9 2005 aa9.75□□□□□ -0.85
BRCC3-205ENST00000399026 DHX16O60231 1041 aaKnown RBP9.75□□□□□ -0.85
BRCC3-205ENST00000399026 ADCY3O60266 1144 aa9.75□□□□□ -0.85
BRCC3-205ENST00000399026 PLA2G6O60733 806 aa9.75□□□□□ -0.85
BRCC3-205ENST00000399026 ALAS1P13196 640 aa9.75□□□□□ -0.85
BRCC3-205ENST00000399026 CASTP20810 708 aaKnown RBP9.75□□□□□ -0.85
BRCC3-205ENST00000399026 DNAJB2P25686 324 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 506.4 ms