RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 ZNF804AQ7Z570 1209 aa9.66□□□□□ -0.86
GAPVD1-204ENST00000394083 POLD4Q9HCU8 107 aa9.66□□□□□ -0.86
GAPVD1-204ENST00000394083 ZNF277Q9NRM2 450 aaPredicted RBP9.66□□□□□ -0.86
GAPVD1-204ENST00000394083 RIOK3O14730 519 aaKnown RBP9.66□□□□□ -0.86
GAPVD1-204ENST00000394083 IKBKBO14920 756 aa9.66□□□□□ -0.86
GAPVD1-204ENST00000394083 LRRN2O75325 713 aa9.66□□□□□ -0.86
GAPVD1-204ENST00000394083 EEF2P13639 858 aaKnown RBP9.66□□□□□ -0.86
GAPVD1-204ENST00000394083 RILPL1Q5EBL4 403 aa9.66□□□□□ -0.86
GAPVD1-204ENST00000394083 TTI2Q6NXR4 508 aa9.66□□□□□ -0.86
GAPVD1-204ENST00000394083 WDR24Q96S15 920 aa9.66□□□□□ -0.86
GAPVD1-204ENST00000394083 TMEM39BQ9GZU3 492 aa9.66□□□□□ -0.86
GAPVD1-204ENST00000394083 AJAP1Q9UKB5 411 aaPredicted RBP9.66□□□□□ -0.86
GAPVD1-204ENST00000394083 STX8Q9UNK0 236 aa9.66□□□□□ -0.86
GAPVD1-204ENST00000394083 C6orf229H3BNL8 230 aa9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 PSMD14O00487 310 aa9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 SLC3A2P08195 630 aaKnown RBP9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 SPATA31C1P0DKV0 1188 aa9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 KRT2P35908 639 aa9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 VSTM4Q8IW00 320 aa9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 NACAP1Q9BZK3 213 aa9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 WDFY4Q6ZS81 3184 aa9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 POTEIP0CG38 1075 aa9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 AFMP43652 599 aa9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 NLGN2Q8NFZ4 835 aa9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 CLIP2Q9UDT6 1046 aa9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 NCBP1Q09161 790 aaKnown RBP9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 ZCWPW2Q504Y3 356 aa9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 WDR18Q9BV38 432 aa9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 BIN2Q9UBW5 565 aaPredicted RBP9.65□□□□□ -0.86
GAPVD1-204ENST00000394083 KCNA1Q09470 495 aa9.65□□□□□ -0.87
GAPVD1-204ENST00000394083 USP40Q9NVE5 1235 aa9.65□□□□□ -0.87
GAPVD1-204ENST00000394083 NPHP3-ACAD11A0A0J9YXS1 232 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 ADKP55263 362 aaKnown RBP9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 TRIM10Q9UDY6 481 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 SALL4Q9UJQ4 1053 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 ZMYM2Q9UBW7 1377 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 MYMKA6NI61 221 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 EML1O00423 815 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 VIL1P09327 827 aaKnown RBP9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 STX17P56962 302 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 FSTL1Q12841 308 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 C2CD5Q86YS7 1000 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 CCAR2Q8N163 923 aaKnown RBP9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 TBCKQ8TEA7 893 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 RNF41Q9H4P4 317 aaPredicted RBP9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 FBXO28Q9NVF7 368 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 R3HCC1Q9Y3T6 440 aaKnown RBP9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 LETM1O95202 739 aaPredicted RBP9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 ARHGAP25P42331 645 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 ST5P78524 1137 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 STRIP1Q5VSL9 837 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 ZNF396Q96N95 335 aaPredicted RBP9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 KCNMB3Q9NPA1 279 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 DISC1Q9NRI5 854 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 FAM53CQ9NYF3 392 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 SERPINB13Q9UIV8 391 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 MMP14P50281 582 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 NLGN1Q8N2Q7 840 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 ANKRD7Q92527 254 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 EHD4Q9H223 541 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 NFE2L3Q9Y4A8 694 aa9.64□□□□□ -0.87
GAPVD1-204ENST00000394083 SPDYE2BA6NHP3 402 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 SPDYE6P0CI01 402 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 ZBTB48P10074 688 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 STAT3P40763 770 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 HIRAP54198 1017 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 STYK1Q6J9G0 422 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 TMED8Q6PL24 325 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 CATIPQ7Z7H3 387 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 ZSWIM2Q8NEG5 633 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 VAV3Q9UKW4 847 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 DHX16O60231 1041 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 PDIA4P13667 645 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 ZSCAN20P17040 1043 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 USP5P45974 858 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 IL31RAQ8NI17 732 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 PPP1R13BQ96KQ4 1090 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 KANSL2Q9H9L4 492 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 GNL3LQ9NVN8 582 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 TSPY3P0CV98 308 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 TSPY8P0CW00 308 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 PLCG1P19174 1290 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 LRRFIP1Q32MZ4 808 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 LRRC55Q6ZSA7 311 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 ADSSL1Q8N142 457 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 TMTC2Q8N394 836 aa9.63□□□□□ -0.87
GAPVD1-204ENST00000394083 RAD17O75943 681 aa9.62□□□□□ -0.87
GAPVD1-204ENST00000394083 HOMER1Q86YM7 354 aa9.62□□□□□ -0.87
GAPVD1-204ENST00000394083 C16orf45Q96MC5 204 aaPredicted RBP9.62□□□□□ -0.87
GAPVD1-204ENST00000394083 CHP1Q99653 195 aa9.62□□□□□ -0.87
GAPVD1-204ENST00000394083 MRIQ9BWK5 157 aa9.62□□□□□ -0.87
GAPVD1-204ENST00000394083 TRIM9Q9C026 710 aa9.62□□□□□ -0.87
GAPVD1-204ENST00000394083 EVPLQ92817 2033 aa9.62□□□□□ -0.87
GAPVD1-204ENST00000394083 SOWAHDA6NJG2 315 aa9.62□□□□□ -0.87
GAPVD1-204ENST00000394083 WNT10BO00744 389 aa9.62□□□□□ -0.87
GAPVD1-204ENST00000394083 MED24O75448 989 aa9.62□□□□□ -0.87
GAPVD1-204ENST00000394083 TMEM119Q4V9L6 283 aa9.62□□□□□ -0.87
GAPVD1-204ENST00000394083 MYRIPQ8NFW9 859 aa9.62□□□□□ -0.87
GAPVD1-204ENST00000394083 SH3GLB2Q9NR46 395 aa9.62□□□□□ -0.87
GAPVD1-204ENST00000394083 NDUFB10O96000 172 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms