RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 STAMBPO95630 424 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 CYP2E1P05181 493 aaPredicted RBP5.5□□□□□ -1.53
LTN1-202ENST00000389194 SMTNP53814 917 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 VSIG1Q86XK7 387 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 CCDC170Q8IYT3 715 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 DCLK2Q8N568 766 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 RNF34Q969K3 372 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 ARHGEF10LQ9HCE6 1279 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 EPB41L5Q9HCM4 733 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 STX10O60499 249 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 OSTNP61366 133 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 E2F4Q16254 413 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 CERKLQ49MI3 558 aaPredicted RBP5.5□□□□□ -1.53
LTN1-202ENST00000389194 FAM196AQ6ZSG2 479 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 OTUD6AQ7L8S5 288 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 SESTD1Q86VW0 696 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 ARMCX3Q9UH62 379 aaPredicted RBP5.5□□□□□ -1.53
LTN1-202ENST00000389194 FAM169AQ9Y6X4 670 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 RBM6P78332 1123 aaKnown RBP5.5□□□□□ -1.53
LTN1-202ENST00000389194 KIF22Q14807 665 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 Q3C1V9 767 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 C6orf163Q5TEZ5 329 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 ARPP21Q9UBL0 812 aaPredicted RBP5.5□□□□□ -1.53
LTN1-202ENST00000389194 RCOR1Q9UKL0 485 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 GOLGA8IPA6NC78 632 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 GOLGA8JA6NMD2 632 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 ERVV-2B6SEH9 535 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 SH2B2O14492 632 aaPredicted RBP5.49□□□□□ -1.53
LTN1-202ENST00000389194 TEX33O43247 280 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 RAD17O75943 681 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 MYCP01106 439 aaPredicted RBP5.49□□□□□ -1.53
LTN1-202ENST00000389194 CLTAP09496 248 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 PLCG1P19174 1290 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 STAT1P42224 750 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 E2F5Q15329 346 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 XKR9Q5GH70 373 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 SEPT14Q6ZU15 432 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 GLG1Q92896 1179 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 PICK1Q9NRD5 415 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 BABAM1Q9NWV8 329 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 PACSIN2Q9UNF0 486 aaPredicted RBP5.49□□□□□ -1.53
LTN1-202ENST00000389194 FAM135BQ49AJ0 1406 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 KIF28PB7ZC32 967 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 PCK1P35558 622 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 PRPHP41219 470 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 MKRN3Q13064 507 aaKnown RBP5.49□□□□□ -1.53
LTN1-202ENST00000389194 TRIM14Q14142 442 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 STOX1Q6ZVD7 989 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 FAM178BQ8IXR5 827 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 SMC6Q96SB8 1091 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 TRIM7Q9C029 511 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 TRIM6Q9C030 488 aaPredicted RBP5.49□□□□□ -1.53
LTN1-202ENST00000389194 TFR2Q9UP52 801 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 POTEMA6NI47 508 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 H0YIN7 160 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 FLOT1O75955 427 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 GFPT2O94808 682 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 MMP1P03956 469 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 MECOMQ03112 1051 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 FAM26FQ5R3K3 315 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 PIGOQ8TEQ8 1089 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 ESYT3A0FGR9 886 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 POC1B-GALNT4F8VUJ3 575 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 TXNDC9O14530 226 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 NR2F2P24468 414 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 DYNLT1P63172 113 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 MAP3K9P80192 1104 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 NCBP1Q09161 790 aaKnown RBP5.49□□□□□ -1.53
LTN1-202ENST00000389194 STRN3Q13033 797 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 IFT88Q13099 833 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 CFAP157Q5JU67 520 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 HP1BP3Q5SSJ5 553 aaPredicted RBP5.49□□□□□ -1.53
LTN1-202ENST00000389194 DENND2CQ68D51 928 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 CLEC10AQ8IUN9 316 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 UBL4BQ8N7F7 174 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 DPF2Q92785 391 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 NUP58Q9BVL2 599 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 APOL6Q9BWW8 343 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 ADAM33Q9BZ11 813 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 MLXIPLQ9NP71 852 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 FAM184BQ9ULE4 1060 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 CD2APQ9Y5K6 639 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 KIF1BO60333 1816 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 MLH3Q9UHC1 1453 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 DCAF8L1A6NGE4 600 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 ACTN4O43707 911 aaKnown RBP5.49□□□□□ -1.53
LTN1-202ENST00000389194 FMNL1O95466 1100 aaPredicted RBP5.49□□□□□ -1.53
LTN1-202ENST00000389194 ICA1Q05084 483 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 PAK2Q13177 524 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 SETDB1Q15047 1291 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 DLGAP5Q15398 846 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 SLFN13Q68D06 897 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 MIER3Q7Z3K6 550 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 TTLL11Q8NHH1 800 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 TEKT1Q969V4 418 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 IFT74Q96LB3 600 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 LBHD1Q9BQE6 289 aaPredicted RBP5.49□□□□□ -1.53
LTN1-202ENST00000389194 SENP2Q9HC62 589 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 AMFRQ9UKV5 643 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 ATP8A1Q9Y2Q0 1164 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms