RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 RASIP1Q5U651 963 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 C11orf57Q6ZUT1 292 aaPredicted RBP18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 USP44Q9H0E7 712 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 COL4A3BPQ9Y5P4 624 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 SMIM24O75264 130 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 CFBP00751 764 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 CUL4BQ13620 913 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 C19orf44Q9H6X5 657 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 FMNL1O95466 1100 aaPredicted RBP18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 HOXA7P31268 230 aaPredicted RBP18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 CTSWP56202 376 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 PDZD4Q76G19 769 aaPredicted RBP18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 RDH13Q8NBN7 331 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 ADGBQ8N7X0 1667 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 K7ENM7 598 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 SART1O43290 800 aaKnown RBP18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 FAM102BQ5T8I3 360 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 TRIM50Q86XT4 487 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 DEPTORQ8TB45 409 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 FBXO18Q8NFZ0 1043 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 HOOK2Q96ED9 719 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 CSRNP1Q96S65 589 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 SLC39A2Q9NP94 309 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 PCDHA12Q9UN75 941 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 TNKSO95271 1327 aa18.69■□□□□ 0.58
SNAPC3-202ENST00000380821 RBBP5Q15291 538 aaKnown RBP18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 CCDC87Q9NVE4 849 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 ABCC12Q96J65 1359 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 MYOM2P54296 1465 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 TRIM11Q96F44 468 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 PBKQ96KB5 322 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 PSTPIP2Q9H939 334 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 TXLNGQ9NUQ3 528 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 TFCP2L1Q9NZI6 479 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 HEXIM1O94992 359 aaKnown RBP18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 ATF7P17544 494 aaPredicted RBP18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 PPP2R5CQ13362 524 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 EXOC3L4Q17RC7 722 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 RINT1Q6NUQ1 792 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 NLRP7Q8WX94 980 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 CUL4AQ13619 759 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 FAM26FQ5R3K3 315 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 CDKL2Q92772 493 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 LRGUKQ96M69 825 aa18.68■□□□□ 0.58
SNAPC3-202ENST00000380821 BRDTQ58F21 947 aaPredicted RBP18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 ZNF658Q5TYW1 1059 aaPredicted RBP18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 ARHGEF18Q6ZSZ5 1173 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 HMGB1P1B2RPK0 211 aaPredicted RBP18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 MYL1P05976 194 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 ADD1P35611 737 aaKnown RBP18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 MYL7Q01449 175 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 EAF2Q96CJ1 260 aaPredicted RBP18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 CACYBPQ9HB71 228 aaKnown RBP18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 EPB41L5Q9HCM4 733 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 SPTLC3Q9NUV7 552 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 BTBD18B2RXH4 712 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 C2orf54Q08AI8 447 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 C10orf76Q5T2E6 689 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 VSTM4Q8IW00 320 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 CMTR1Q8N1G2 835 aaKnown RBP18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 CACTINQ8WUQ7 758 aaKnown RBP18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 RIOK1Q9BRS2 568 aaKnown RBP18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 CLCN6P51797 869 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 PTGDRQ13258 359 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 BSPRYQ5W0U4 402 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 SDCCAG3Q96C92 435 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 EDC3Q96F86 508 aaKnown RBP18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 SCYL1Q96KG9 808 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 PANX2Q96RD6 677 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 JRKLQ9Y4A0 524 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 ENC1O14682 589 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 AK8Q96MA6 479 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 PARD6BQ9BYG5 372 aa18.67■□□□□ 0.58
SNAPC3-202ENST00000380821 BICRAQ9NZM4 1560 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 NCKAP5LQ9HCH0 1330 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 TNNC2P02585 160 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 MFAP3P55082 362 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 AOC3Q16853 763 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 FBXO41Q8TF61 875 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 RWDD2AQ9UIY3 292 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 PCDHA5Q9Y5H7 936 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 PGRMC1O00264 195 aaKnown RBP18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 LIG4P49917 911 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 PRR16Q569H4 304 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 ANKRD35Q8N283 1001 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 SLC17A8Q8NDX2 589 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 WHAMMQ8TF30 809 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 PRPF31Q8WWY3 499 aaKnown RBP18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 SYNMO15061 1565 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 PDE6AP16499 860 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 PEX19P40855 299 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 FNBP4Q8N3X1 1017 aaPredicted RBP18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 MAN1B1Q9UKM7 699 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 DPCR1Q3MIW9 517 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 UHMK1Q8TAS1 419 aaKnown RBP18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 P2RX5Q93086 422 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 DAAM1Q9Y4D1 1078 aa18.66■□□□□ 0.58
SNAPC3-202ENST00000380821 POLR2BP30876 1174 aaKnown RBP18.65■□□□□ 0.58
SNAPC3-202ENST00000380821 NNTQ13423 1086 aa18.65■□□□□ 0.58
SNAPC3-202ENST00000380821 ADAT2Q7Z6V5 191 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms