RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 HELLSQ9NRZ9 838 aa20.65■□□□□ 0.9
HLA-A-201ENST00000376802 CYP39A1Q9NYL5 469 aa20.65■□□□□ 0.9
HLA-A-201ENST00000376802 GNEQ9Y223 722 aaKnown RBP20.65■□□□□ 0.9
HLA-A-201ENST00000376802 MROH7Q68CQ1 1323 aa20.65■□□□□ 0.9
HLA-A-201ENST00000376802 ASB14A6NK59 587 aa20.64■□□□□ 0.89
HLA-A-201ENST00000376802 FGAP02671 866 aa20.64■□□□□ 0.89
HLA-A-201ENST00000376802 BEX3Q00994 111 aa20.64■□□□□ 0.89
HLA-A-201ENST00000376802 TNFAIP2Q03169 654 aa20.64■□□□□ 0.89
HLA-A-201ENST00000376802 FAM126BQ8IXS8 530 aa20.64■□□□□ 0.89
HLA-A-201ENST00000376802 A0A0D9SFI3 127 aa20.63■□□□□ 0.89
HLA-A-201ENST00000376802 A0A0U1RQG5 324 aaPredicted RBP20.63■□□□□ 0.89
HLA-A-201ENST00000376802 HDAC1Q13547 482 aaPredicted RBP20.63■□□□□ 0.89
HLA-A-201ENST00000376802 TTBK2Q6IQ55 1244 aa20.63■□□□□ 0.89
HLA-A-201ENST00000376802 MFSD5Q6N075 450 aa20.63■□□□□ 0.89
HLA-A-201ENST00000376802 TAPT1Q6NXT6 567 aa20.63■□□□□ 0.89
HLA-A-201ENST00000376802 MYLIPQ8WY64 445 aa20.63■□□□□ 0.89
HLA-A-201ENST00000376802 VTI1AQ96AJ9 217 aa20.63■□□□□ 0.89
HLA-A-201ENST00000376802 PURBQ96QR8 312 aaKnown RBP20.63■□□□□ 0.89
HLA-A-201ENST00000376802 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.63■□□□□ 0.89
HLA-A-201ENST00000376802 PDGFCQ9NRA1 345 aa20.63■□□□□ 0.89
HLA-A-201ENST00000376802 CD4P01730 458 aa20.62■□□□□ 0.89
HLA-A-201ENST00000376802 SMPD1P17405 629 aa20.62■□□□□ 0.89
HLA-A-201ENST00000376802 TMEM63BQ5T3F8 832 aa20.62■□□□□ 0.89
HLA-A-201ENST00000376802 BTNL9Q6UXG8 535 aa20.62■□□□□ 0.89
HLA-A-201ENST00000376802 SLC43A3Q8NBI5 491 aa20.62■□□□□ 0.89
HLA-A-201ENST00000376802 DCAF4Q8WV16 495 aa20.62■□□□□ 0.89
HLA-A-201ENST00000376802 COL25A1Q9BXS0 654 aaPredicted RBP20.62■□□□□ 0.89
HLA-A-201ENST00000376802 MTMR7Q9Y216 660 aa20.62■□□□□ 0.89
HLA-A-201ENST00000376802 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.61■□□□□ 0.89
HLA-A-201ENST00000376802 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.61■□□□□ 0.89
HLA-A-201ENST00000376802 GRIN2DO15399 1336 aa20.61■□□□□ 0.89
HLA-A-201ENST00000376802 ICAM1P05362 532 aa20.61■□□□□ 0.89
HLA-A-201ENST00000376802 SLC16A2P36021 539 aa20.61■□□□□ 0.89
HLA-A-201ENST00000376802 MCMDC2Q4G0Z9 681 aa20.61■□□□□ 0.89
HLA-A-201ENST00000376802 CXCL17Q6UXB2 119 aa20.61■□□□□ 0.89
HLA-A-201ENST00000376802 TLK2Q86UE8 772 aa20.61■□□□□ 0.89
HLA-A-201ENST00000376802 ZNF589Q86UQ0 364 aaPredicted RBP20.61■□□□□ 0.89
HLA-A-201ENST00000376802 MAFAQ8NHW3 353 aaPredicted RBP20.61■□□□□ 0.89
HLA-A-201ENST00000376802 MORC4Q8TE76 937 aa20.61■□□□□ 0.89
HLA-A-201ENST00000376802 TMEM47Q9BQJ4 181 aa20.61■□□□□ 0.89
HLA-A-201ENST00000376802 RANBP17Q9H2T7 1088 aaKnown RBP20.61■□□□□ 0.89
HLA-A-201ENST00000376802 TCP11L1Q9NUJ3 509 aa20.61■□□□□ 0.89
HLA-A-201ENST00000376802 ZBTB47Q9UFB7 747 aaPredicted RBP20.61■□□□□ 0.89
HLA-A-201ENST00000376802 CCPG1Q9ULG6 757 aa20.61■□□□□ 0.89
HLA-A-201ENST00000376802 TMEM265A0A087WTH1 108 aa20.6■□□□□ 0.89
HLA-A-201ENST00000376802 HSPD1P10809 573 aaKnown RBP20.6■□□□□ 0.89
HLA-A-201ENST00000376802 CSF2RAP15509 400 aa20.6■□□□□ 0.89
HLA-A-201ENST00000376802 CCDC96Q2M329 555 aa20.6■□□□□ 0.89
HLA-A-201ENST00000376802 TMEM240Q5SV17 173 aa20.6■□□□□ 0.89
HLA-A-201ENST00000376802 RASIP1Q5U651 963 aa20.6■□□□□ 0.89
HLA-A-201ENST00000376802 NOL8Q76FK4 1167 aaKnown RBP20.6■□□□□ 0.89
HLA-A-201ENST00000376802 TICAM2Q86XR7 235 aa20.6■□□□□ 0.89
HLA-A-201ENST00000376802 ZMYM6O95789 1325 aa20.59■□□□□ 0.89
HLA-A-201ENST00000376802 TOP1P11387 765 aaKnown RBP20.59■□□□□ 0.89
HLA-A-201ENST00000376802 FSCN1Q16658 493 aaKnown RBP20.59■□□□□ 0.89
HLA-A-201ENST00000376802 IQSEC1Q6DN90 963 aa20.59■□□□□ 0.89
HLA-A-201ENST00000376802 NSMFQ6X4W1 530 aa20.59■□□□□ 0.89
HLA-A-201ENST00000376802 EEPD1Q7L9B9 569 aa20.59■□□□□ 0.89
HLA-A-201ENST00000376802 FBXO16Q8IX29 292 aaPredicted RBP20.59■□□□□ 0.89
HLA-A-201ENST00000376802 CHD9Q3L8U1 2897 aa20.59■□□□□ 0.89
HLA-A-201ENST00000376802 DYNC1LI2O43237 492 aaPredicted RBP20.58■□□□□ 0.89
HLA-A-201ENST00000376802 DNAJB2P25686 324 aa20.58■□□□□ 0.89
HLA-A-201ENST00000376802 NMIQ13287 307 aaPredicted RBP20.58■□□□□ 0.89
HLA-A-201ENST00000376802 PPIGQ13427 754 aaKnown RBP eCLIP20.58■□□□□ 0.89
HLA-A-201ENST00000376802 GRIN2CQ14957 1233 aa20.58■□□□□ 0.89
HLA-A-201ENST00000376802 RRP12Q5JTH9 1297 aaKnown RBP20.58■□□□□ 0.89
HLA-A-201ENST00000376802 PPP1R12CQ9BZL4 782 aa20.58■□□□□ 0.89
HLA-A-201ENST00000376802 TOMM22Q9NS69 142 aa20.58■□□□□ 0.89
HLA-A-201ENST00000376802 Q9Y3F1 56 aa20.58■□□□□ 0.89
HLA-A-201ENST00000376802 MYO9BQ13459 2157 aa20.58■□□□□ 0.88
HLA-A-201ENST00000376802 FRMPD2Q68DX3 1309 aaPredicted RBP20.57■□□□□ 0.88
HLA-A-201ENST00000376802 NFIBO00712 420 aa20.57■□□□□ 0.88
HLA-A-201ENST00000376802 TLR3O15455 904 aaKnown RBP20.57■□□□□ 0.88
HLA-A-201ENST00000376802 CABYRO75952 493 aa20.57■□□□□ 0.88
HLA-A-201ENST00000376802 ITGA7Q13683 1181 aa20.57■□□□□ 0.88
HLA-A-201ENST00000376802 BAATQ14032 418 aaPredicted RBP20.57■□□□□ 0.88
HLA-A-201ENST00000376802 SYDE2Q5VT97 1194 aa20.57■□□□□ 0.88
HLA-A-201ENST00000376802 TMEM199Q8N511 208 aa20.57■□□□□ 0.88
HLA-A-201ENST00000376802 AP5M1Q9H0R1 490 aa20.57■□□□□ 0.88
HLA-A-201ENST00000376802 GPCPD1Q9NPB8 672 aa20.57■□□□□ 0.88
HLA-A-201ENST00000376802 SPTBN5Q9NRC6 3674 aaKnown RBP20.57■□□□□ 0.88
HLA-A-201ENST00000376802 ACRP10323 421 aa20.56■□□□□ 0.88
HLA-A-201ENST00000376802 PDHBP11177 359 aa20.56■□□□□ 0.88
HLA-A-201ENST00000376802 CYP2C18P33260 490 aa20.56■□□□□ 0.88
HLA-A-201ENST00000376802 HAND2P61296 217 aa20.56■□□□□ 0.88
HLA-A-201ENST00000376802 ZNF365Q70YC5 407 aa20.56■□□□□ 0.88
HLA-A-201ENST00000376802 TBC1D10CQ8IV04 446 aa20.56■□□□□ 0.88
HLA-A-201ENST00000376802 CLEC4DQ8WXI8 215 aa20.56■□□□□ 0.88
HLA-A-201ENST00000376802 LNPKQ9C0E8 428 aa20.56■□□□□ 0.88
HLA-A-201ENST00000376802 VTA1Q9NP79 307 aa20.56■□□□□ 0.88
HLA-A-201ENST00000376802 GBF1Q92538 1859 aa20.56■□□□□ 0.88
HLA-A-201ENST00000376802 CCDC171Q6TFL3 1326 aa20.56■□□□□ 0.88
HLA-A-201ENST00000376802 FOSL2P15408 326 aa20.55■□□□□ 0.88
HLA-A-201ENST00000376802 ALDH5A1P51649 535 aaPredicted RBP20.55■□□□□ 0.88
HLA-A-201ENST00000376802 KIAA1211Q6ZU35 1233 aa20.55■□□□□ 0.88
HLA-A-201ENST00000376802 TTC14Q96N46 770 aa20.55■□□□□ 0.88
HLA-A-201ENST00000376802 UMODL1Q5DID0 1318 aa20.55■□□□□ 0.88
HLA-A-201ENST00000376802 LAMA4Q16363 1823 aa20.54■□□□□ 0.88
HLA-A-201ENST00000376802 GRXCR1A8MXD5 290 aa20.54■□□□□ 0.88
HLA-A-201ENST00000376802 SNHG28P0DPA3 235 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms