RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 MNAT1P51948 309 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 CCDC155Q8N6L0 562 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 MED15Q96RN5 788 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 TLDC2A0PJX2 215 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 HGSO14964 777 aaPredicted RBP16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 IVLP07476 585 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ALX1Q15699 326 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 NAA35Q5VZE5 725 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 FOXR1Q6PIV2 292 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 REXO1Q8N1G1 1221 aaKnown RBP16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 SH3RF3Q8TEJ3 882 aaPredicted RBP16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 PHF20Q9BVI0 1012 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 LUC7LQ9NQ29 371 aaKnown RBP16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 EIF4A3P38919 411 aaKnown RBP16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 TROAPQ12815 778 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 STK4Q13043 487 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 PKN1Q16512 942 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 CALCRLQ16602 461 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 MAEAQ7L5Y9 396 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ZNF579Q8NAF0 562 aaKnown RBP16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 EBAG9O00559 213 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 OR52Z1P0C646 297 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 GNA11P29992 359 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 POLR2FP61218 127 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 EHHADHQ08426 723 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 UBE2SQ16763 222 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 NFRKBQ6P4R8 1299 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 KSR1Q8IVT5 923 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 CCDC51Q96ER9 411 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 LACRTQ9GZZ8 138 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 PKD2L1Q9P0L9 805 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 UBR1Q8IWV7 1749 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 TRIM14Q14142 442 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 DNAAF5Q86Y56 855 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 BCAS4Q8TDM0 211 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ZNF287Q9HBT7 754 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 PCDHA4Q9UN74 947 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 WDR19Q8NEZ3 1342 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 NDUFAB1O14561 156 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ADAMTS3O15072 1205 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 MCM3P25205 808 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 MDM2Q00987 491 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 SETQ01105 290 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 CT47A1Q5JQC4 288 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 TXNRD3Q86VQ6 643 aa15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 MARCH10Q8NA82 808 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 CCDC43Q96MW1 224 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1B-201ENST00000376259 GGCXP38435 758 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 GNGT1P63211 74 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ATP2C1P98194 919 aaPredicted RBP15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 CFAP58Q5T655 872 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 TMEM139Q8IV31 216 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 P2RX5Q93086 422 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 LCMT1Q9UIC8 334 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 TMEM110-MUSTN1A8MSY1 372 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 CHMP2AO43633 222 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 SCNN1DP51172 638 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 VAV2P52735 878 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 SNAP25P60880 206 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 IFFO1Q0D2I5 559 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 RDH13Q8NBN7 331 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 FAM205AQ6ZU69 1335 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 CDHR2Q9BYE9 1310 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 LDHCP07864 332 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 LONP1P36776 959 aaKnown RBP15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 GUCY2DQ02846 1103 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 CYP4A11Q02928 519 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 USH1GQ495M9 461 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 TBC1D10BQ4KMP7 808 aaPredicted RBP15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ANKRD40Q6AI12 368 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 KIFC2Q96AC6 838 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 JCADQ9P266 1359 aa15.98■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ZNF804BA4D1E1 1349 aa15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 DDAH1O94760 285 aa15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 PPP2R5BQ15173 497 aa15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 EZH2Q15910 746 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 TTC31Q49AM3 519 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 UHMK1Q8TAS1 419 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 PLA2G12BQ9BX93 195 aa15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 CEP104O60308 925 aa15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 UBE4AQ14139 1066 aa15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 E2F4Q16254 413 aa15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 CNNM4Q6P4Q7 775 aa15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 GOLGA5Q8TBA6 731 aa15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ANKZF1Q9H8Y5 726 aa15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 FAM196BA6NMK8 535 aa15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 LRRIQ3A6PVS8 624 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ZRANB2O95218 330 aaKnown RBP eCLIP15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 NEK8Q86SG6 692 aa15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 VGLL2Q8N8G2 317 aa15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 MS4A14Q96JA4 679 aa15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 GOLPH3Q9H4A6 298 aa15.97■□□□□ 0.15
TNFRSF1B-201ENST00000376259 TNS3Q68CZ2 1445 aa15.96■□□□□ 0.15
TNFRSF1B-201ENST00000376259 MEIS1O00470 390 aa15.96■□□□□ 0.15
TNFRSF1B-201ENST00000376259 KCNJ6P48051 423 aa15.96■□□□□ 0.15
TNFRSF1B-201ENST00000376259 GFPT1Q06210 699 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ITPK1Q13572 414 aa15.96■□□□□ 0.15
TNFRSF1B-201ENST00000376259 PFKFB3Q16875 520 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF1B-201ENST00000376259 MFSD14BQ5SR56 506 aa15.96■□□□□ 0.15
TNFRSF1B-201ENST00000376259 EXOC4Q96A65 974 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms