RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 PARP3Q9Y6F1 533 aa20.31■□□□□ 0.84
CD40-201ENST00000372276 QSER1Q2KHR3 1735 aa20.3■□□□□ 0.84
CD40-201ENST00000372276 IGKV6D-41A0A0C4DH26 115 aa20.3■□□□□ 0.84
CD40-201ENST00000372276 NPR1P16066 1061 aa20.3■□□□□ 0.84
CD40-201ENST00000372276 PDIA5Q14554 519 aa20.3■□□□□ 0.84
CD40-201ENST00000372276 ELF2Q15723 593 aa20.3■□□□□ 0.84
CD40-201ENST00000372276 EZH2Q15910 746 aaKnown RBP20.3■□□□□ 0.84
CD40-201ENST00000372276 TSR1Q2NL82 804 aaKnown RBP20.3■□□□□ 0.84
CD40-201ENST00000372276 KMT5BQ4FZB7 885 aa20.3■□□□□ 0.84
CD40-201ENST00000372276 GPATCH4Q5T3I0 446 aaKnown RBP20.3■□□□□ 0.84
CD40-201ENST00000372276 TOGARAM2Q6ZUX3 1019 aa20.3■□□□□ 0.84
CD40-201ENST00000372276 RETREG2Q8NC44 543 aa20.3■□□□□ 0.84
CD40-201ENST00000372276 CCDC17Q96LX7 622 aa20.3■□□□□ 0.84
CD40-201ENST00000372276 MRIQ9BWK5 157 aa20.3■□□□□ 0.84
CD40-201ENST00000372276 KLRC4O43908 158 aa20.29■□□□□ 0.84
CD40-201ENST00000372276 TTLL1O95922 423 aa20.29■□□□□ 0.84
CD40-201ENST00000372276 HLA-DOAP06340 250 aa20.29■□□□□ 0.84
CD40-201ENST00000372276 GOLGA8HP0CJ92 632 aa20.29■□□□□ 0.84
CD40-201ENST00000372276 PDHBP11177 359 aa20.29■□□□□ 0.84
CD40-201ENST00000372276 H2AFXP16104 143 aaPredicted RBP20.29■□□□□ 0.84
CD40-201ENST00000372276 DNM2P50570 870 aa20.29■□□□□ 0.84
CD40-201ENST00000372276 FXR2P51116 673 aaKnown RBP eCLIP20.29■□□□□ 0.84
CD40-201ENST00000372276 ADCY7P51828 1080 aa20.29■□□□□ 0.84
CD40-201ENST00000372276 GTF2IP78347 998 aa20.29■□□□□ 0.84
CD40-201ENST00000372276 GOLGA8FQ08AF8 430 aa20.29■□□□□ 0.84
CD40-201ENST00000372276 GOLGA8DPQ0D2H9 430 aa20.29■□□□□ 0.84
CD40-201ENST00000372276 LETM2Q2VYF4 491 aa20.29■□□□□ 0.84
CD40-201ENST00000372276 CNNM4Q6P4Q7 775 aa20.29■□□□□ 0.84
CD40-201ENST00000372276 USP17L2Q6R6M4 530 aa20.29■□□□□ 0.84
CD40-201ENST00000372276 GPR101Q96P66 508 aaPredicted RBP20.29■□□□□ 0.84
CD40-201ENST00000372276 EXOC1Q9NV70 894 aa20.29■□□□□ 0.84
CD40-201ENST00000372276 ADAMTS3O15072 1205 aa20.28■□□□□ 0.84
CD40-201ENST00000372276 ATP8B1O43520 1251 aa20.28■□□□□ 0.84
CD40-201ENST00000372276 GYPCP04921 128 aa20.28■□□□□ 0.84
CD40-201ENST00000372276 CASP14P31944 242 aa20.28■□□□□ 0.84
CD40-201ENST00000372276 FLAD1Q8NFF5 587 aa20.28■□□□□ 0.84
CD40-201ENST00000372276 SERPINB13Q9UIV8 391 aa20.28■□□□□ 0.84
CD40-201ENST00000372276 PNMA6FA0A0J9YX94 578 aa20.27■□□□□ 0.84
CD40-201ENST00000372276 PVALEFA0A1B0GWK0 134 aa20.27■□□□□ 0.84
CD40-201ENST00000372276 LGALS16A8MUM7 142 aa20.27■□□□□ 0.84
CD40-201ENST00000372276 FGFR1OPO95684 399 aaKnown RBP20.27■□□□□ 0.84
CD40-201ENST00000372276 CCNE1P24864 410 aa20.27■□□□□ 0.84
CD40-201ENST00000372276 DDR1Q08345 913 aa20.27■□□□□ 0.84
CD40-201ENST00000372276 BMS1Q14692 1282 aaKnown RBP20.27■□□□□ 0.84
CD40-201ENST00000372276 JAKMIP3Q5VZ66 844 aa20.27■□□□□ 0.84
CD40-201ENST00000372276 MCTP2Q6DN12 878 aa20.27■□□□□ 0.84
CD40-201ENST00000372276 FOXR2Q6PJQ5 311 aa20.27■□□□□ 0.84
CD40-201ENST00000372276 TBCKQ8TEA7 893 aa20.27■□□□□ 0.84
CD40-201ENST00000372276 PIGSQ96S52 555 aa20.27■□□□□ 0.84
CD40-201ENST00000372276 NUP88Q99567 741 aaPredicted RBP20.27■□□□□ 0.84
CD40-201ENST00000372276 EHD4Q9H223 541 aa20.27■□□□□ 0.84
CD40-201ENST00000372276 TADA3O75528 432 aa20.27■□□□□ 0.83
CD40-201ENST00000372276 GCFC2P16383 781 aaKnown RBP20.27■□□□□ 0.83
CD40-201ENST00000372276 PLCG1P19174 1290 aa20.27■□□□□ 0.83
CD40-201ENST00000372276 PDE6BP35913 854 aa20.27■□□□□ 0.83
CD40-201ENST00000372276 FKBP1AP62942 108 aaKnown RBP20.27■□□□□ 0.83
CD40-201ENST00000372276 FAM193AP78312 1265 aa20.27■□□□□ 0.83
CD40-201ENST00000372276 UBXN1Q04323 297 aa20.27■□□□□ 0.83
CD40-201ENST00000372276 TRIM47Q96LD4 638 aa20.27■□□□□ 0.83
CD40-201ENST00000372276 TRIM9Q9C026 710 aa20.27■□□□□ 0.83
CD40-201ENST00000372276 ABHD10Q9NUJ1 306 aa20.27■□□□□ 0.83
CD40-201ENST00000372276 GDAQ9Y2T3 454 aa20.27■□□□□ 0.83
CD40-201ENST00000372276 MRFAP1Q9Y605 127 aa20.27■□□□□ 0.83
CD40-201ENST00000372276 MYH8P13535 1937 aa20.26■□□□□ 0.83
CD40-201ENST00000372276 USP17L5A8MUK1 530 aa20.26■□□□□ 0.83
CD40-201ENST00000372276 CCT6AP40227 531 aaKnown RBP20.26■□□□□ 0.83
CD40-201ENST00000372276 MRPL12P52815 198 aaKnown RBP20.26■□□□□ 0.83
CD40-201ENST00000372276 NAA30Q147X3 362 aaPredicted RBP20.26■□□□□ 0.83
CD40-201ENST00000372276 SEPT2Q15019 361 aa20.26■□□□□ 0.83
CD40-201ENST00000372276 TXNRD1Q16881 649 aa20.26■□□□□ 0.83
CD40-201ENST00000372276 ERCC6LQ2NKX8 1250 aa20.26■□□□□ 0.83
CD40-201ENST00000372276 PPP4R3AQ6IN85 833 aa20.26■□□□□ 0.83
CD40-201ENST00000372276 SV2BQ7L1I2 683 aa20.26■□□□□ 0.83
CD40-201ENST00000372276 PROM2Q8N271 834 aa20.26■□□□□ 0.83
CD40-201ENST00000372276 GPR161Q8N6U8 529 aaKnown RBP20.26■□□□□ 0.83
CD40-201ENST00000372276 MB21D1Q8N884 522 aa20.26■□□□□ 0.83
CD40-201ENST00000372276 OR8K1Q8NGG5 319 aa20.26■□□□□ 0.83
CD40-201ENST00000372276 VPS16Q9H269 839 aa20.26■□□□□ 0.83
CD40-201ENST00000372276 MTMR7Q9Y216 660 aa20.26■□□□□ 0.83
CD40-201ENST00000372276 SOWAHDA6NJG2 315 aa20.25■□□□□ 0.83
CD40-201ENST00000372276 CALCRLQ16602 461 aa20.25■□□□□ 0.83
CD40-201ENST00000372276 ARHGAP29Q52LW3 1261 aa20.25■□□□□ 0.83
CD40-201ENST00000372276 FBXO38Q6PIJ6 1188 aa20.25■□□□□ 0.83
CD40-201ENST00000372276 KRT222Q8N1A0 295 aa20.25■□□□□ 0.83
CD40-201ENST00000372276 CEP112Q8N8E3 955 aa20.25■□□□□ 0.83
CD40-201ENST00000372276 CPLX3Q8WVH0 158 aa20.25■□□□□ 0.83
CD40-201ENST00000372276 P2RX5Q93086 422 aa20.25■□□□□ 0.83
CD40-201ENST00000372276 KIFC2Q96AC6 838 aa20.25■□□□□ 0.83
CD40-201ENST00000372276 MTMR9Q96QG7 549 aa20.25■□□□□ 0.83
CD40-201ENST00000372276 RIC8AQ9NPQ8 531 aa20.25■□□□□ 0.83
CD40-201ENST00000372276 TAB2Q9NYJ8 693 aa20.25■□□□□ 0.83
CD40-201ENST00000372276 LUC7L2Q9Y383 392 aaKnown RBP20.25■□□□□ 0.83
CD40-201ENST00000372276 ABCB11O95342 1321 aa20.25■□□□□ 0.83
CD40-201ENST00000372276 POTEB2H3BUK9 544 aa20.24■□□□□ 0.83
CD40-201ENST00000372276 CDC25AP30304 524 aa20.24■□□□□ 0.83
CD40-201ENST00000372276 CBX1P83916 185 aa20.24■□□□□ 0.83
CD40-201ENST00000372276 HDLBPQ00341 1268 aaKnown RBP20.24■□□□□ 0.83
CD40-201ENST00000372276 PDE4DQ08499 809 aa20.24■□□□□ 0.83
CD40-201ENST00000372276 ZNF543Q08ER8 600 aa20.24■□□□□ 0.83
CD40-201ENST00000372276 PSMD2Q13200 908 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms