RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 CNPY2Q9Y2B0 182 aa23.36■■□□□ 1.33
TMEM53-205ENST00000372244 CEP290O15078 2479 aa23.35■■□□□ 1.33
TMEM53-205ENST00000372244 NFIBO00712 420 aa23.35■■□□□ 1.33
TMEM53-205ENST00000372244 COL6A1P12109 1028 aa23.35■■□□□ 1.33
TMEM53-205ENST00000372244 CDC37Q16543 378 aaPredicted RBP23.35■■□□□ 1.33
TMEM53-205ENST00000372244 RGS22Q8NE09 1264 aa23.35■■□□□ 1.33
TMEM53-205ENST00000372244 MAP3K14Q99558 947 aa23.35■■□□□ 1.33
TMEM53-205ENST00000372244 HTATIP2Q9BUP3 242 aa23.35■■□□□ 1.33
TMEM53-205ENST00000372244 PLXNA1Q9UIW2 1896 aa23.34■■□□□ 1.33
TMEM53-205ENST00000372244 ASTN1O14525 1302 aa23.34■■□□□ 1.33
TMEM53-205ENST00000372244 LIFRP42702 1097 aa23.34■■□□□ 1.33
TMEM53-205ENST00000372244 BAATQ14032 418 aaPredicted RBP23.34■■□□□ 1.33
TMEM53-205ENST00000372244 SLC35G1Q2M3R5 365 aa23.34■■□□□ 1.33
TMEM53-205ENST00000372244 NSMFQ6X4W1 530 aa23.34■■□□□ 1.33
TMEM53-205ENST00000372244 CATIPQ7Z7H3 387 aa23.34■■□□□ 1.33
TMEM53-205ENST00000372244 MAF1Q9H063 256 aa23.34■■□□□ 1.33
TMEM53-205ENST00000372244 VAT1LQ9HCJ6 419 aa23.34■■□□□ 1.33
TMEM53-205ENST00000372244 SH2B2O14492 632 aaPredicted RBP23.33■■□□□ 1.33
TMEM53-205ENST00000372244 QRICH1Q2TAL8 776 aa23.33■■□□□ 1.33
TMEM53-205ENST00000372244 PRPF38BQ5VTL8 546 aaKnown RBP23.33■■□□□ 1.33
TMEM53-205ENST00000372244 ARMCX2Q7L311 632 aa23.33■■□□□ 1.33
TMEM53-205ENST00000372244 CCDC144CPQ8IYA2 1237 aa23.33■■□□□ 1.33
TMEM53-205ENST00000372244 ABHD16BQ9H3Z7 469 aa23.33■■□□□ 1.33
TMEM53-205ENST00000372244 RIOX1Q9H6W3 641 aa23.33■■□□□ 1.33
TMEM53-205ENST00000372244 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.33■■□□□ 1.33
TMEM53-205ENST00000372244 ASB14A6NK59 587 aa23.32■■□□□ 1.32
TMEM53-205ENST00000372244 EXOSC10Q01780 885 aaKnown RBP23.32■■□□□ 1.32
TMEM53-205ENST00000372244 ACVR2BQ13705 512 aa23.32■■□□□ 1.32
TMEM53-205ENST00000372244 ARRDC4Q8NCT1 418 aa23.32■■□□□ 1.32
TMEM53-205ENST00000372244 NEK1Q96PY6 1258 aa23.32■■□□□ 1.32
TMEM53-205ENST00000372244 KATNBL1Q9H079 304 aa23.32■■□□□ 1.32
TMEM53-205ENST00000372244 C11orf49Q9H6J7 331 aa23.32■■□□□ 1.32
TMEM53-205ENST00000372244 ADCK5Q3MIX3 580 aa23.31■■□□□ 1.32
TMEM53-205ENST00000372244 ANO1Q5XXA6 986 aa23.31■■□□□ 1.32
TMEM53-205ENST00000372244 ZNF654Q8IZM8 581 aa23.31■■□□□ 1.32
TMEM53-205ENST00000372244 MORC4Q8TE76 937 aa23.31■■□□□ 1.32
TMEM53-205ENST00000372244 DPF3Q92784 378 aa23.31■■□□□ 1.32
TMEM53-205ENST00000372244 PURBQ96QR8 312 aaKnown RBP23.31■■□□□ 1.32
TMEM53-205ENST00000372244 CYTH3O43739 400 aa23.3■■□□□ 1.32
TMEM53-205ENST00000372244 DDAH1O94760 285 aa23.3■■□□□ 1.32
TMEM53-205ENST00000372244 REC8O95072 547 aa23.3■■□□□ 1.32
TMEM53-205ENST00000372244 AKR1A1P14550 325 aa23.3■■□□□ 1.32
TMEM53-205ENST00000372244 HSPA4P34932 840 aa23.3■■□□□ 1.32
TMEM53-205ENST00000372244 KRT32Q14532 448 aa23.3■■□□□ 1.32
TMEM53-205ENST00000372244 USH1GQ495M9 461 aa23.3■■□□□ 1.32
TMEM53-205ENST00000372244 FBXO11Q86XK2 927 aa23.3■■□□□ 1.32
TMEM53-205ENST00000372244 FAM184BQ9ULE4 1060 aa23.3■■□□□ 1.32
TMEM53-205ENST00000372244 ABCB11O95342 1321 aa23.3■■□□□ 1.32
TMEM53-205ENST00000372244 DNM1LO00429 736 aa23.3■■□□□ 1.32
TMEM53-205ENST00000372244 ZBTB5O15062 677 aa23.3■■□□□ 1.32
TMEM53-205ENST00000372244 EPB41L2O43491 1005 aaKnown RBP23.3■■□□□ 1.32
TMEM53-205ENST00000372244 DHX16O60231 1041 aaKnown RBP23.3■■□□□ 1.32
TMEM53-205ENST00000372244 RARBP10826 455 aa23.3■■□□□ 1.32
TMEM53-205ENST00000372244 RPS6P62753 249 aaKnown RBP23.3■■□□□ 1.32
TMEM53-205ENST00000372244 RNF207Q6ZRF8 634 aa23.3■■□□□ 1.32
TMEM53-205ENST00000372244 DHX32Q7L7V1 743 aaKnown RBP23.3■■□□□ 1.32
TMEM53-205ENST00000372244 LOC102724159A0A0B4J2E5 919 aa23.29■■□□□ 1.32
TMEM53-205ENST00000372244 PTPDC1A2A3K4 754 aa23.29■■□□□ 1.32
TMEM53-205ENST00000372244 PWP2Q15269 919 aaKnown RBP23.29■■□□□ 1.32
TMEM53-205ENST00000372244 SGMS1Q86VZ5 419 aa23.29■■□□□ 1.32
TMEM53-205ENST00000372244 AMNQ9BXJ7 453 aa23.29■■□□□ 1.32
TMEM53-205ENST00000372244 LRRC2Q9BYS8 371 aa23.29■■□□□ 1.32
TMEM53-205ENST00000372244 ADD3Q9UEY8 706 aaKnown RBP23.29■■□□□ 1.32
TMEM53-205ENST00000372244 PPP1R11O60927 126 aaPredicted RBP23.28■■□□□ 1.32
TMEM53-205ENST00000372244 SMARCA1P28370 1054 aa23.28■■□□□ 1.32
TMEM53-205ENST00000372244 LRRC41Q15345 812 aa23.28■■□□□ 1.32
TMEM53-205ENST00000372244 CCDC144BQ3MJ40 725 aa23.28■■□□□ 1.32
TMEM53-205ENST00000372244 GJC2Q5T442 439 aaPredicted RBP23.28■■□□□ 1.32
TMEM53-205ENST00000372244 SLC30A10Q6XR72 485 aa23.28■■□□□ 1.32
TMEM53-205ENST00000372244 NUP133Q8WUM0 1156 aa23.28■■□□□ 1.32
TMEM53-205ENST00000372244 TBC1D5Q92609 795 aa23.28■■□□□ 1.32
TMEM53-205ENST00000372244 MYL10Q9BUA6 226 aa23.28■■□□□ 1.32
TMEM53-205ENST00000372244 ZHX1Q9UKY1 873 aaPredicted RBP23.28■■□□□ 1.32
TMEM53-205ENST00000372244 MRPL11Q9Y3B7 192 aaKnown RBP23.28■■□□□ 1.32
TMEM53-205ENST00000372244 CCDC69A6NI79 296 aa23.27■■□□□ 1.32
TMEM53-205ENST00000372244 HMGB1P09429 215 aaKnown RBP23.27■■□□□ 1.32
TMEM53-205ENST00000372244 NFXL1Q6ZNB6 911 aa23.27■■□□□ 1.32
TMEM53-205ENST00000372244 XPNPEP3Q9NQH7 507 aa23.27■■□□□ 1.32
TMEM53-205ENST00000372244 DDX49Q9Y6V7 483 aaKnown RBP23.27■■□□□ 1.32
TMEM53-205ENST00000372244 BAZ2BQ9UIF8 2168 aaKnown RBP23.27■■□□□ 1.32
TMEM53-205ENST00000372244 PNMA6FA0A0J9YX94 578 aa23.26■■□□□ 1.31
TMEM53-205ENST00000372244 DUSP11O75319 330 aaKnown RBP23.26■■□□□ 1.31
TMEM53-205ENST00000372244 CALML3P27482 149 aa23.26■■□□□ 1.31
TMEM53-205ENST00000372244 KIF5BP33176 963 aa23.26■■□□□ 1.31
TMEM53-205ENST00000372244 MCF2L2Q86YR7 1114 aa23.26■■□□□ 1.31
TMEM53-205ENST00000372244 DNERQ8NFT8 737 aa23.26■■□□□ 1.31
TMEM53-205ENST00000372244 CTCFLQ8NI51 663 aaPredicted RBP23.26■■□□□ 1.31
TMEM53-205ENST00000372244 PIGSQ96S52 555 aa23.26■■□□□ 1.31
TMEM53-205ENST00000372244 LZTS2Q9BRK4 669 aa23.26■■□□□ 1.31
TMEM53-205ENST00000372244 SNX14Q9Y5W7 946 aa23.26■■□□□ 1.31
TMEM53-205ENST00000372244 H0YGN5 161 aa23.25■■□□□ 1.31
TMEM53-205ENST00000372244 OPLAHO14841 1288 aa23.25■■□□□ 1.31
TMEM53-205ENST00000372244 ADCY6O43306 1168 aa23.25■■□□□ 1.31
TMEM53-205ENST00000372244 EVI5O60447 810 aa23.25■■□□□ 1.31
TMEM53-205ENST00000372244 PGK1P00558 417 aa23.25■■□□□ 1.31
TMEM53-205ENST00000372244 CALM1P0DP23 149 aa23.25■■□□□ 1.31
TMEM53-205ENST00000372244 CALM2P0DP24 149 aa23.25■■□□□ 1.31
TMEM53-205ENST00000372244 CALM3P0DP25 149 aa23.25■■□□□ 1.31
TMEM53-205ENST00000372244 ALDH5A1P51649 535 aaPredicted RBP23.25■■□□□ 1.31
TMEM53-205ENST00000372244 TAPT1Q6NXT6 567 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms