RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 METTL14Q9HCE5 456 aaKnown RBP10.78□□□□□ -0.68
COL4A6-202ENST00000372216 PRKAB2O43741 272 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 IREB2P48200 963 aaKnown RBP10.78□□□□□ -0.68
COL4A6-202ENST00000372216 MNAT1P51948 309 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 KRT81Q14533 505 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 CLUL1Q15846 466 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 NXNQ6DKJ4 435 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-202ENST00000372216 MYOCDQ8IZQ8 938 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 ZNF653Q96CK0 615 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 ADPGKQ9BRR6 497 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 BSDC1Q9NW68 430 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-202ENST00000372216 WDR46O15213 610 aaKnown RBP10.78□□□□□ -0.68
COL4A6-202ENST00000372216 PFKFB1P16118 471 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 TMOD1P28289 359 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 ZNF131P52739 623 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 KLHL30Q0D2K2 578 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 CPLX4Q7Z7G2 160 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 ANKS4BQ8N8V4 417 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 AP5M1Q9H0R1 490 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 OLA1Q9NTK5 396 aaKnown RBP10.78□□□□□ -0.68
COL4A6-202ENST00000372216 MOSPD1Q9UJG1 213 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 NFE2L3Q9Y4A8 694 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 ATF7P17544 494 aaPredicted RBP10.77□□□□□ -0.68
COL4A6-202ENST00000372216 CCND2P30279 289 aa10.77□□□□□ -0.68
COL4A6-202ENST00000372216 MGARPQ8TDB4 240 aa10.77□□□□□ -0.68
COL4A6-202ENST00000372216 ZKSCAN5Q9Y2L8 839 aa10.77□□□□□ -0.68
COL4A6-202ENST00000372216 MECOMQ03112 1051 aa10.77□□□□□ -0.69
COL4A6-202ENST00000372216 HLFQ16534 295 aa10.77□□□□□ -0.69
COL4A6-202ENST00000372216 SECISBP2LQ93073 1101 aaKnown RBP10.77□□□□□ -0.69
COL4A6-202ENST00000372216 ATG3Q9NT62 314 aa10.77□□□□□ -0.69
COL4A6-202ENST00000372216 RRP9O43818 475 aaKnown RBP10.77□□□□□ -0.69
COL4A6-202ENST00000372216 PDIA3P30101 505 aaKnown RBP10.77□□□□□ -0.69
COL4A6-202ENST00000372216 LRRIQ4A6NIV6 560 aa10.77□□□□□ -0.69
COL4A6-202ENST00000372216 GPATCH4Q5T3I0 446 aaKnown RBP10.77□□□□□ -0.69
COL4A6-202ENST00000372216 ABI1Q8IZP0 508 aa10.77□□□□□ -0.69
COL4A6-202ENST00000372216 GPR161Q8N6U8 529 aaKnown RBP10.77□□□□□ -0.69
COL4A6-202ENST00000372216 NAPGQ99747 312 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-202ENST00000372216 ZNF577Q9BSK1 485 aa10.77□□□□□ -0.69
COL4A6-202ENST00000372216 LSG1Q9H089 658 aaKnown RBP10.77□□□□□ -0.69
COL4A6-202ENST00000372216 VAV2P52735 878 aa10.77□□□□□ -0.69
COL4A6-202ENST00000372216 PI16Q6UXB8 463 aa10.77□□□□□ -0.69
COL4A6-202ENST00000372216 EEPD1Q7L9B9 569 aa10.77□□□□□ -0.69
COL4A6-202ENST00000372216 COA1Q9GZY4 146 aa10.77□□□□□ -0.69
COL4A6-202ENST00000372216 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.77□□□□□ -0.69
COL4A6-202ENST00000372216 ALKQ9UM73 1620 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 H0YCG3 227 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 CIB2O75838 187 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 USP17L8P0C7I0 530 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 SCRN1Q12765 414 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 SLC12A1Q13621 1099 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 SH2D4BQ5SQS7 431 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 FOSP01100 380 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-202ENST00000372216 RNASELQ05823 741 aaKnown RBP10.76□□□□□ -0.69
COL4A6-202ENST00000372216 SYDE2Q5VT97 1194 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 MIS18BP1Q6P0N0 1132 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 MICALL1Q8N3F8 863 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 DYNLL2Q96FJ2 89 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 SCYL1Q96KG9 808 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 DHX36Q9H2U1 1008 aaKnown RBP10.76□□□□□ -0.69
COL4A6-202ENST00000372216 PCDHA4Q9UN74 947 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 GLI2P10070 1586 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 CLGNO14967 610 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 STAT2P52630 851 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 LRCH2Q5VUJ6 765 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 CCDC121Q6ZUS5 278 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 NME8Q8N427 588 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 TTC14Q96N46 770 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 RBSNQ9H1K0 784 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 KANSL2Q9H9L4 492 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 FAM207AQ9NSI2 230 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-202ENST00000372216 AKT3Q9Y243 479 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 ITM2BQ9Y287 266 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 COL15A1P39059 1388 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 ARHGAP31Q2M1Z3 1444 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 TBC1D8O95759 1140 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 TFDP1Q14186 410 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 ZNF365Q70YC5 407 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 ALKBH8Q96BT7 664 aaKnown RBP10.76□□□□□ -0.69
COL4A6-202ENST00000372216 PARP2Q9UGN5 583 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 ZBTB7AO95365 584 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 BMP3P12645 472 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 XRCC5P13010 732 aaKnown RBP10.76□□□□□ -0.69
COL4A6-202ENST00000372216 CYP4A11Q02928 519 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 ADALQ6DHV7 355 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 RRAGAQ7L523 313 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 ZNF589Q86UQ0 364 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-202ENST00000372216 FAM178BQ8IXR5 827 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 PGBD1Q96JS3 809 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 PI4KBQ9UBF8 816 aa10.76□□□□□ -0.69
COL4A6-202ENST00000372216 UTP11Q9Y3A2 253 aaKnown RBP10.76□□□□□ -0.69
COL4A6-202ENST00000372216 FMNL1O95466 1100 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-202ENST00000372216 ALDH3A1P30838 453 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 ZNF75DP51815 510 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 MORC3Q14149 939 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 GOLGA5Q8TBA6 731 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 ZBED2Q9BTP6 218 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 SERPINB13Q9UIV8 391 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 RABGAP1Q9Y3P9 1069 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 OVOS2A0A0G2JMS6 1433 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms