RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 TPRP12270 2363 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 GPR179Q6PRD1 2367 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 CHD6Q8TD26 2715 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 TCERG1O14776 1098 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 SIN3BO75182 1162 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 SASH3O75995 380 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 NFAT5O94916 1531 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 FOSP01100 380 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 PSAPP07602 524 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 MAP2P11137 1827 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 TM4SF1P30408 202 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 RAPGEF1Q13905 1077 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 LRIT3Q3SXY7 679 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 USP34Q70CQ2 3546 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 DDX46Q7L014 1031 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 TMC7Q7Z402 723 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 RAB44Q7Z6P3 723 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 SYT9Q86SS6 491 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 SLC51AQ86UW1 340 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 GPC2Q8N158 579 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 OTUD6BQ8N6M0 293 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 USHBP1Q8N6Y0 703 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 CD99L2Q8TCZ2 262 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 ALKBH8Q96BT7 664 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 OXCT2Q9BYC2 517 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 ACBD3Q9H3P7 528 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 C14orf93Q9H972 538 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 GBA2Q9HCG7 927 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 DLEC1Q9Y238 1755 aa4.28□□□□□ -1.72
ECHDC1-205ENST00000368295 USP31Q70CQ4 1352 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 A6NHS1 94 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 ADM5C9JUS6 153 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 FZD9O00144 591 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 KRT18P05783 430 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 FAM200BP0CF97 657 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 SYN1P17600 705 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 FANCCQ00597 558 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 BRD3Q15059 726 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 GJC2Q5T442 439 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 NBPF6Q5VWK0 638 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 SLCO4C1Q6ZQN7 724 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 FERMT3Q86UX7 667 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 VPS37DQ86XT2 251 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 SH3TC2Q8TF17 1288 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 ANP32BQ92688 251 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 NBPF4Q96M43 638 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 GDF15Q99988 308 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 ZNF700Q9H0M5 742 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 ABI2Q9NYB9 513 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 ZNF69Q9UC07 566 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 NOL7Q9UMY1 257 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 SH3BP1Q9Y3L3 701 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 CACNA1SQ13698 1873 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 MAST4O15021 2626 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 USP42Q9H9J4 1324 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 FLNBO75369 2602 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 CCDC163A0A0D9SF12 145 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 PIK3R2O00459 728 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 GPR182O15218 404 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 PHACTR2O75167 634 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 HOXD8P13378 290 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 NFIXQ14938 502 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 PCSK7Q16549 785 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 PRPF40BQ6NWY9 871 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 USP50Q70EL3 339 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 MOB2Q70IA6 237 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 ENOX1Q8TC92 643 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 SMARCC1Q92922 1105 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 SLC39A13Q96H72 371 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 MPHOSPH6Q99547 160 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 IER2Q9BTL4 223 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 UBE2OQ9C0C9 1292 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 TLR7Q9NYK1 1049 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 TMEM63CQ9P1W3 806 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 ZFATQ9P243 1243 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 ABCF2Q9UG63 623 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 NR2E3Q9Y5X4 410 aa4.27□□□□□ -1.73
ECHDC1-205ENST00000368295 C5orf42Q9H799 3197 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 SLX4Q8IY92 1834 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 WDFY4Q6ZS81 3184 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 NPHP1O15259 732 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 TREHO43280 583 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 MMP20O60882 483 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 TNFRSF21O75509 655 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 LDHCP07864 332 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 TARSP26639 723 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 SOX18P35713 384 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 ZNF76P36508 570 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 CASP2P42575 452 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 NRLP54845 237 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 PCBP4P57723 403 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 GPLD1P80108 840 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 PLAURQ03405 335 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 TBC1D8BQ0IIM8 1120 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 PPP2R5AQ15172 486 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 TMEM31Q5JXX7 168 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 USPL1Q5W0Q7 1092 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 DHX32Q7L7V1 743 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 OR13H1Q8NG92 308 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms