RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 BEX3Q00994 111 aa22.89■■□□□ 1.25
ITGA4-202ENST00000339307 AKNAD1Q5T1N1 836 aa22.89■■□□□ 1.25
ITGA4-202ENST00000339307 ZNF697Q5TEC3 545 aa22.89■■□□□ 1.25
ITGA4-202ENST00000339307 SYDE2Q5VT97 1194 aa22.89■■□□□ 1.25
ITGA4-202ENST00000339307 CCSAPQ6IQ19 270 aaPredicted RBP22.89■■□□□ 1.25
ITGA4-202ENST00000339307 CWC27Q6UX04 472 aaKnown RBP22.89■■□□□ 1.25
ITGA4-202ENST00000339307 TICAM2Q86XR7 235 aa22.89■■□□□ 1.25
ITGA4-202ENST00000339307 PLEKHM2Q8IWE5 1019 aa22.89■■□□□ 1.25
ITGA4-202ENST00000339307 DIAPH3Q9NSV4 1193 aa22.89■■□□□ 1.25
ITGA4-202ENST00000339307 CYP39A1Q9NYL5 469 aa22.89■■□□□ 1.25
ITGA4-202ENST00000339307 STXBP5LQ9Y2K9 1186 aa22.89■■□□□ 1.25
ITGA4-202ENST00000339307 KIAA0355O15063 1070 aa22.88■■□□□ 1.25
ITGA4-202ENST00000339307 FAAP100Q0VG06 881 aa22.88■■□□□ 1.25
ITGA4-202ENST00000339307 ANKRD33Q7Z3H0 272 aa22.88■■□□□ 1.25
ITGA4-202ENST00000339307 RNF41Q9H4P4 317 aaPredicted RBP22.88■■□□□ 1.25
ITGA4-202ENST00000339307 TCP11L1Q9NUJ3 509 aa22.88■■□□□ 1.25
ITGA4-202ENST00000339307 ZNF213O14771 459 aa22.87■■□□□ 1.25
ITGA4-202ENST00000339307 CST5P28325 142 aaPredicted RBP22.87■■□□□ 1.25
ITGA4-202ENST00000339307 NOVP48745 357 aa22.87■■□□□ 1.25
ITGA4-202ENST00000339307 NUCB1Q02818 461 aa22.87■■□□□ 1.25
ITGA4-202ENST00000339307 FPGSQ05932 587 aa22.87■■□□□ 1.25
ITGA4-202ENST00000339307 TBC1D10CQ8IV04 446 aa22.87■■□□□ 1.25
ITGA4-202ENST00000339307 RNPC3Q96LT9 517 aaKnown RBP22.87■■□□□ 1.25
ITGA4-202ENST00000339307 TOX2Q96NM4 488 aa22.87■■□□□ 1.25
ITGA4-202ENST00000339307 PURBQ96QR8 312 aaKnown RBP22.87■■□□□ 1.25
ITGA4-202ENST00000339307 ZKSCAN3Q9BRR0 538 aa22.87■■□□□ 1.25
ITGA4-202ENST00000339307 KATNBL1Q9H079 304 aa22.87■■□□□ 1.25
ITGA4-202ENST00000339307 AP5M1Q9H0R1 490 aa22.87■■□□□ 1.25
ITGA4-202ENST00000339307 UPF3AQ9H1J1 476 aaKnown RBP22.87■■□□□ 1.25
ITGA4-202ENST00000339307 RANBP17Q9H2T7 1088 aaKnown RBP22.87■■□□□ 1.25
ITGA4-202ENST00000339307 ELP1O95163 1332 aa22.87■■□□□ 1.25
ITGA4-202ENST00000339307 A0A0U1RQG5 324 aaPredicted RBP22.86■■□□□ 1.25
ITGA4-202ENST00000339307 PTPDC1A2A3K4 754 aa22.86■■□□□ 1.25
ITGA4-202ENST00000339307 FBXO16Q8IX29 292 aaPredicted RBP22.86■■□□□ 1.25
ITGA4-202ENST00000339307 ESR2Q92731 530 aa22.86■■□□□ 1.25
ITGA4-202ENST00000339307 ZMYM6O95789 1325 aa22.86■■□□□ 1.25
ITGA4-202ENST00000339307 MROH7Q68CQ1 1323 aa22.86■■□□□ 1.25
ITGA4-202ENST00000339307 DYNC1LI2O43237 492 aaPredicted RBP22.85■■□□□ 1.25
ITGA4-202ENST00000339307 BAATQ14032 418 aaPredicted RBP22.85■■□□□ 1.25
ITGA4-202ENST00000339307 TLK2Q86UE8 772 aa22.85■■□□□ 1.25
ITGA4-202ENST00000339307 PDGFCQ9NRA1 345 aa22.85■■□□□ 1.25
ITGA4-202ENST00000339307 PDHBP11177 359 aa22.84■■□□□ 1.25
ITGA4-202ENST00000339307 PCP11498 1178 aaKnown RBP22.84■■□□□ 1.25
ITGA4-202ENST00000339307 CALML3P27482 149 aa22.84■■□□□ 1.25
ITGA4-202ENST00000339307 EPHB4P54760 987 aa22.84■■□□□ 1.25
ITGA4-202ENST00000339307 FAM109BQ6ICB4 259 aaPredicted RBP22.84■■□□□ 1.25
ITGA4-202ENST00000339307 BTNL9Q6UXG8 535 aa22.84■■□□□ 1.25
ITGA4-202ENST00000339307 KIAA1211Q6ZU35 1233 aa22.84■■□□□ 1.25
ITGA4-202ENST00000339307 TTC14Q96N46 770 aa22.84■■□□□ 1.25
ITGA4-202ENST00000339307 ADD3Q9UEY8 706 aaKnown RBP22.84■■□□□ 1.25
ITGA4-202ENST00000339307 ARVCFO00192 962 aa22.83■■□□□ 1.25
ITGA4-202ENST00000339307 TLR3O15455 904 aaKnown RBP22.83■■□□□ 1.25
ITGA4-202ENST00000339307 SMPD1P17405 629 aa22.83■■□□□ 1.25
ITGA4-202ENST00000339307 PTGS1P23219 599 aa22.83■■□□□ 1.25
ITGA4-202ENST00000339307 CXCL17Q6UXB2 119 aa22.83■■□□□ 1.25
ITGA4-202ENST00000339307 NEDD4P46934 1319 aa22.83■■□□□ 1.25
ITGA4-202ENST00000339307 NFIBO00712 420 aa22.82■■□□□ 1.24
ITGA4-202ENST00000339307 ZEB2O60315 1214 aa22.82■■□□□ 1.24
ITGA4-202ENST00000339307 TIMP1P01033 207 aa22.82■■□□□ 1.24
ITGA4-202ENST00000339307 GOLGA8HP0CJ92 632 aa22.82■■□□□ 1.24
ITGA4-202ENST00000339307 FSCN1Q16658 493 aaKnown RBP22.82■■□□□ 1.24
ITGA4-202ENST00000339307 IQSEC1Q6DN90 963 aa22.82■■□□□ 1.24
ITGA4-202ENST00000339307 PPP1R12CQ9BZL4 782 aa22.82■■□□□ 1.24
ITGA4-202ENST00000339307 OSBPL3Q9H4L5 887 aa22.82■■□□□ 1.24
ITGA4-202ENST00000339307 ASTN1O14525 1302 aa22.82■■□□□ 1.24
ITGA4-202ENST00000339307 HIP1O00291 1037 aa22.82■■□□□ 1.24
ITGA4-202ENST00000339307 DLL1O00548 723 aa22.82■■□□□ 1.24
ITGA4-202ENST00000339307 CDK7P50613 346 aa22.82■■□□□ 1.24
ITGA4-202ENST00000339307 ZNF543Q08ER8 600 aa22.82■■□□□ 1.24
ITGA4-202ENST00000339307 GUCD1Q96NT3 240 aa22.82■■□□□ 1.24
ITGA4-202ENST00000339307 GNEQ9Y223 722 aaKnown RBP22.82■■□□□ 1.24
ITGA4-202ENST00000339307 CTAGE5O15320 804 aa22.81■■□□□ 1.24
ITGA4-202ENST00000339307 KDM4AO75164 1064 aa22.81■■□□□ 1.24
ITGA4-202ENST00000339307 ALDH5A1P51649 535 aaPredicted RBP22.81■■□□□ 1.24
ITGA4-202ENST00000339307 SMAD3P84022 425 aaKnown RBP22.81■■□□□ 1.24
ITGA4-202ENST00000339307 TAPT1Q6NXT6 567 aa22.81■■□□□ 1.24
ITGA4-202ENST00000339307 RNF207Q6ZRF8 634 aa22.81■■□□□ 1.24
ITGA4-202ENST00000339307 IQCA1Q86XH1 822 aa22.81■■□□□ 1.24
ITGA4-202ENST00000339307 VTA1Q9NP79 307 aa22.81■■□□□ 1.24
ITGA4-202ENST00000339307 USH1GQ495M9 461 aa22.8■■□□□ 1.24
ITGA4-202ENST00000339307 TMEM63BQ5T3F8 832 aa22.8■■□□□ 1.24
ITGA4-202ENST00000339307 SLC30A10Q6XR72 485 aa22.8■■□□□ 1.24
ITGA4-202ENST00000339307 UBA5Q9GZZ9 404 aa22.8■■□□□ 1.24
ITGA4-202ENST00000339307 KAT14Q9H8E8 782 aa22.8■■□□□ 1.24
ITGA4-202ENST00000339307 TBX21Q9UL17 535 aa22.8■■□□□ 1.24
ITGA4-202ENST00000339307 CABYRO75952 493 aa22.79■■□□□ 1.24
ITGA4-202ENST00000339307 IMMTQ16891 758 aaKnown RBP22.79■■□□□ 1.24
ITGA4-202ENST00000339307 MFSD5Q6N075 450 aa22.79■■□□□ 1.24
ITGA4-202ENST00000339307 FAM126BQ8IXS8 530 aa22.79■■□□□ 1.24
ITGA4-202ENST00000339307 TMEM199Q8N511 208 aa22.79■■□□□ 1.24
ITGA4-202ENST00000339307 MPHOSPH6Q99547 160 aaKnown RBP22.79■■□□□ 1.24
ITGA4-202ENST00000339307 CPVLQ9H3G5 476 aa22.79■■□□□ 1.24
ITGA4-202ENST00000339307 SEMA6BQ9H3T3 888 aa22.79■■□□□ 1.24
ITGA4-202ENST00000339307 PNMA2Q9UL42 364 aa22.79■■□□□ 1.24
ITGA4-202ENST00000339307 B4E1Z4 1266 aa22.78■■□□□ 1.24
ITGA4-202ENST00000339307 DHX16O60231 1041 aaKnown RBP22.78■■□□□ 1.24
ITGA4-202ENST00000339307 PDE4DQ08499 809 aa22.78■■□□□ 1.24
ITGA4-202ENST00000339307 PPIGQ13427 754 aaKnown RBP eCLIP22.78■■□□□ 1.24
ITGA4-202ENST00000339307 ITGA7Q13683 1181 aa22.78■■□□□ 1.24
ITGA4-202ENST00000339307 CCDC178Q5BJE1 867 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms