RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 DDX49Q9Y6V7 483 aaKnown RBP28.85■■■□□ 2.21
CDKN3-202ENST00000335183 PPIGQ13427 754 aaKnown RBP eCLIP28.84■■■□□ 2.21
CDKN3-202ENST00000335183 FAM126BQ8IXS8 530 aa28.84■■■□□ 2.21
CDKN3-202ENST00000335183 EVI5LQ96CN4 794 aa28.84■■■□□ 2.21
CDKN3-202ENST00000335183 TOMM22Q9NS69 142 aa28.84■■■□□ 2.21
CDKN3-202ENST00000335183 CCPG1Q9ULG6 757 aa28.84■■■□□ 2.21
CDKN3-202ENST00000335183 UNC80Q8N2C7 3258 aa28.83■■■□□ 2.21
CDKN3-202ENST00000335183 DNAJB2P25686 324 aa28.83■■■□□ 2.21
CDKN3-202ENST00000335183 NSMFQ6X4W1 530 aa28.83■■■□□ 2.21
CDKN3-202ENST00000335183 EEPD1Q7L9B9 569 aa28.83■■■□□ 2.21
CDKN3-202ENST00000335183 TLK2Q86UE8 772 aa28.83■■■□□ 2.21
CDKN3-202ENST00000335183 ANAPC4Q9UJX5 808 aa28.83■■■□□ 2.21
CDKN3-202ENST00000335183 ASTN1O14525 1302 aa28.83■■■□□ 2.21
CDKN3-202ENST00000335183 CSF2RAP15509 400 aa28.82■■■□□ 2.2
CDKN3-202ENST00000335183 CXCL17Q6UXB2 119 aa28.82■■■□□ 2.2
CDKN3-202ENST00000335183 TMEM199Q8N511 208 aa28.82■■■□□ 2.2
CDKN3-202ENST00000335183 AP5M1Q9H0R1 490 aa28.82■■■□□ 2.2
CDKN3-202ENST00000335183 CYP39A1Q9NYL5 469 aa28.82■■■□□ 2.2
CDKN3-202ENST00000335183 GNEQ9Y223 722 aaKnown RBP28.82■■■□□ 2.2
CDKN3-202ENST00000335183 PTGS1P23219 599 aa28.81■■■□□ 2.2
CDKN3-202ENST00000335183 NKX3-2P78367 333 aa28.81■■■□□ 2.2
CDKN3-202ENST00000335183 RRP12Q5JTH9 1297 aaKnown RBP28.81■■■□□ 2.2
CDKN3-202ENST00000335183 FBXO16Q8IX29 292 aaPredicted RBP28.81■■■□□ 2.2
CDKN3-202ENST00000335183 PDGFCQ9NRA1 345 aa28.81■■■□□ 2.2
CDKN3-202ENST00000335183 HELLSQ9NRZ9 838 aa28.81■■■□□ 2.2
CDKN3-202ENST00000335183 DYNC1LI2O43237 492 aaPredicted RBP28.8■■■□□ 2.2
CDKN3-202ENST00000335183 ORC4O43929 436 aa28.8■■■□□ 2.2
CDKN3-202ENST00000335183 ACRP10323 421 aa28.8■■■□□ 2.2
CDKN3-202ENST00000335183 SMPD1P17405 629 aa28.8■■■□□ 2.2
CDKN3-202ENST00000335183 RRP1P56182 461 aaKnown RBP28.8■■■□□ 2.2
CDKN3-202ENST00000335183 FSCN1Q16658 493 aaKnown RBP28.8■■■□□ 2.2
CDKN3-202ENST00000335183 TMEM240Q5SV17 173 aa28.8■■■□□ 2.2
CDKN3-202ENST00000335183 C16orf59Q7L2K0 433 aa28.8■■■□□ 2.2
CDKN3-202ENST00000335183 DCAF4Q8WV16 495 aa28.8■■■□□ 2.2
CDKN3-202ENST00000335183 SLC16A2P36021 539 aa28.79■■■□□ 2.2
CDKN3-202ENST00000335183 GRIN2CQ14957 1233 aa28.79■■■□□ 2.2
CDKN3-202ENST00000335183 TTBK2Q6IQ55 1244 aa28.79■■■□□ 2.2
CDKN3-202ENST00000335183 TIFAQ96CG3 184 aa28.79■■■□□ 2.2
CDKN3-202ENST00000335183 PURBQ96QR8 312 aaKnown RBP28.79■■■□□ 2.2
CDKN3-202ENST00000335183 CABYRO75952 493 aa28.78■■■□□ 2.2
CDKN3-202ENST00000335183 CD4P01730 458 aa28.78■■■□□ 2.2
CDKN3-202ENST00000335183 ICAM1P05362 532 aa28.78■■■□□ 2.2
CDKN3-202ENST00000335183 CYP2C18P33260 490 aa28.78■■■□□ 2.2
CDKN3-202ENST00000335183 ZNF365Q70YC5 407 aa28.78■■■□□ 2.2
CDKN3-202ENST00000335183 FAM227BQ96M60 508 aa28.78■■■□□ 2.2
CDKN3-202ENST00000335183 CRBNQ96SW2 442 aa28.78■■■□□ 2.2
CDKN3-202ENST00000335183 ZNF576Q9H609 170 aa28.78■■■□□ 2.2
CDKN3-202ENST00000335183 FRMPD2Q68DX3 1309 aaPredicted RBP28.77■■■□□ 2.2
CDKN3-202ENST00000335183 GBF1Q92538 1859 aa28.77■■■□□ 2.2
CDKN3-202ENST00000335183 ZEB2O60315 1214 aa28.77■■■□□ 2.2
CDKN3-202ENST00000335183 NOVP48745 357 aa28.77■■■□□ 2.2
CDKN3-202ENST00000335183 PDE1AP54750 535 aa28.77■■■□□ 2.2
CDKN3-202ENST00000335183 ITGA7Q13683 1181 aa28.77■■■□□ 2.2
CDKN3-202ENST00000335183 ALX1Q15699 326 aa28.77■■■□□ 2.2
CDKN3-202ENST00000335183 IQSEC1Q6DN90 963 aa28.77■■■□□ 2.2
CDKN3-202ENST00000335183 TAPT1Q6NXT6 567 aa28.77■■■□□ 2.2
CDKN3-202ENST00000335183 PSRC1Q6PGN9 363 aaPredicted RBP28.77■■■□□ 2.2
CDKN3-202ENST00000335183 RANBP17Q9H2T7 1088 aaKnown RBP28.77■■■□□ 2.2
CDKN3-202ENST00000335183 A0A0D9SFI3 127 aa28.76■■■□□ 2.19
CDKN3-202ENST00000335183 GRXCR1A8MXD5 290 aa28.76■■■□□ 2.19
CDKN3-202ENST00000335183 FGAP02671 866 aa28.76■■■□□ 2.19
CDKN3-202ENST00000335183 FGRP09769 529 aa28.76■■■□□ 2.19
CDKN3-202ENST00000335183 MCMDC2Q4G0Z9 681 aa28.76■■■□□ 2.19
CDKN3-202ENST00000335183 TMEM63BQ5T3F8 832 aa28.76■■■□□ 2.19
CDKN3-202ENST00000335183 KIAA1211Q6ZU35 1233 aa28.76■■■□□ 2.19
CDKN3-202ENST00000335183 TMEM47Q9BQJ4 181 aa28.76■■■□□ 2.19
CDKN3-202ENST00000335183 VTA1Q9NP79 307 aa28.76■■■□□ 2.19
CDKN3-202ENST00000335183 GPCPD1Q9NPB8 672 aa28.76■■■□□ 2.19
CDKN3-202ENST00000335183 TOP1P11387 765 aaKnown RBP28.75■■■□□ 2.19
CDKN3-202ENST00000335183 BAATQ14032 418 aaPredicted RBP28.75■■■□□ 2.19
CDKN3-202ENST00000335183 SYDE2Q5VT97 1194 aa28.75■■■□□ 2.19
CDKN3-202ENST00000335183 SLC43A3Q8NBI5 491 aa28.75■■■□□ 2.19
CDKN3-202ENST00000335183 PBX4Q9BYU1 374 aa28.75■■■□□ 2.19
CDKN3-202ENST00000335183 HIPK3Q9H422 1215 aa28.75■■■□□ 2.19
CDKN3-202ENST00000335183 MYO9BQ13459 2157 aa28.74■■■□□ 2.19
CDKN3-202ENST00000335183 CDH23Q9H251 3354 aa28.74■■■□□ 2.19
CDKN3-202ENST00000335183 PBX2P40425 430 aa28.74■■■□□ 2.19
CDKN3-202ENST00000335183 BTNL9Q6UXG8 535 aa28.74■■■□□ 2.19
CDKN3-202ENST00000335183 IL23AQ9NPF7 189 aa28.74■■■□□ 2.19
CDKN3-202ENST00000335183 ADD3Q9UEY8 706 aaKnown RBP28.74■■■□□ 2.19
CDKN3-202ENST00000335183 Q9Y3F1 56 aa28.74■■■□□ 2.19
CDKN3-202ENST00000335183 UMODL1Q5DID0 1318 aa28.73■■■□□ 2.19
CDKN3-202ENST00000335183 PTPDC1A2A3K4 754 aa28.73■■■□□ 2.19
CDKN3-202ENST00000335183 NFIBO00712 420 aa28.73■■■□□ 2.19
CDKN3-202ENST00000335183 HSPD1P10809 573 aaKnown RBP28.73■■■□□ 2.19
CDKN3-202ENST00000335183 ALDH5A1P51649 535 aaPredicted RBP28.73■■■□□ 2.19
CDKN3-202ENST00000335183 HAND2P61296 217 aa28.73■■■□□ 2.19
CDKN3-202ENST00000335183 PSMC6P62333 389 aa28.73■■■□□ 2.19
CDKN3-202ENST00000335183 RASIP1Q5U651 963 aa28.73■■■□□ 2.19
CDKN3-202ENST00000335183 EYSQ5T1H1 3165 aa28.72■■■□□ 2.19
CDKN3-202ENST00000335183 GRIN2DO15399 1336 aa28.72■■■□□ 2.19
CDKN3-202ENST00000335183 NMIQ13287 307 aaPredicted RBP28.72■■■□□ 2.19
CDKN3-202ENST00000335183 MORC4Q8TE76 937 aa28.72■■■□□ 2.19
CDKN3-202ENST00000335183 TRIM6-TRIM34B2RNG4 842 aa28.71■■■□□ 2.19
CDKN3-202ENST00000335183 B4GALT4O60513 344 aa28.71■■■□□ 2.19
CDKN3-202ENST00000335183 CCL23P55773 120 aa28.71■■■□□ 2.19
CDKN3-202ENST00000335183 ZNF589Q86UQ0 364 aaPredicted RBP28.71■■■□□ 2.19
CDKN3-202ENST00000335183 TRPV6Q9H1D0 765 aa28.71■■■□□ 2.19
CDKN3-202ENST00000335183 TCP11L1Q9NUJ3 509 aa28.71■■■□□ 2.19
CDKN3-202ENST00000335183 CALML3P27482 149 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms