RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 PLEKHA4Q9H4M7 779 aa19.45■□□□□ 0.7
PTP4A3-201ENST00000329397 PDS5AQ29RF7 1337 aaKnown RBP19.45■□□□□ 0.7
PTP4A3-201ENST00000329397 STRCQ7RTU9 1775 aa19.45■□□□□ 0.7
PTP4A3-201ENST00000329397 PCP11498 1178 aaKnown RBP19.45■□□□□ 0.7
PTP4A3-201ENST00000329397 LAMB2P55268 1798 aa19.45■□□□□ 0.7
PTP4A3-201ENST00000329397 PDE4DQ08499 809 aa19.45■□□□□ 0.7
PTP4A3-201ENST00000329397 SKIDA1Q1XH10 827 aa19.45■□□□□ 0.7
PTP4A3-201ENST00000329397 TGFBRAP1Q8WUH2 860 aa19.45■□□□□ 0.7
PTP4A3-201ENST00000329397 DNAJC7Q99615 494 aa19.45■□□□□ 0.7
PTP4A3-201ENST00000329397 M0R2N6 131 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 TBC1D8BQ0IIM8 1120 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 TSR1Q2NL82 804 aaKnown RBP19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 EXOC4Q96A65 974 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 JAKMIP2Q96AA8 810 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 PSMB7Q99436 277 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 POTEB2H3BUK9 544 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 CCNT1O60563 726 aaKnown RBP19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 TSPY3P0CV98 308 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 TSPY8P0CW00 308 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 ASIC1P78348 528 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 MAPKAPK5Q8IW41 473 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 CNOT6LQ96LI5 555 aaKnown RBP19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 KBTBD4Q9NVX7 518 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 CAPN11Q9UMQ6 739 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 LAMB1P07942 1786 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 KIAA1551Q9HCM1 1747 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 STXBP3O00186 592 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 PDE2AO00408 941 aaPredicted RBP19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 TRIM66O15016 1216 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 MYBL2P10244 700 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 TECP42680 631 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 ATP2B2Q01814 1243 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 GIMAP8Q8ND71 665 aaPredicted RBP19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 SAR1BQ9Y6B6 198 aa19.44■□□□□ 0.7
PTP4A3-201ENST00000329397 MTIF2P46199 727 aaKnown RBP19.43■□□□□ 0.7
PTP4A3-201ENST00000329397 C12orf60Q5U649 245 aa19.43■□□□□ 0.7
PTP4A3-201ENST00000329397 CABP7Q86V35 215 aa19.43■□□□□ 0.7
PTP4A3-201ENST00000329397 PYM1Q9BRP8 204 aaKnown RBP19.43■□□□□ 0.7
PTP4A3-201ENST00000329397 NHEJ1Q9H9Q4 299 aaPredicted RBP19.43■□□□□ 0.7
PTP4A3-201ENST00000329397 MYO1AQ9UBC5 1043 aa19.43■□□□□ 0.7
PTP4A3-201ENST00000329397 RHOBTB3O94955 611 aa19.43■□□□□ 0.7
PTP4A3-201ENST00000329397 STIM1Q13586 685 aa19.43■□□□□ 0.7
PTP4A3-201ENST00000329397 CCDC148Q8NFR7 591 aa19.43■□□□□ 0.7
PTP4A3-201ENST00000329397 HAUS4Q9H6D7 363 aa19.43■□□□□ 0.7
PTP4A3-201ENST00000329397 SLC39A2Q9NP94 309 aa19.43■□□□□ 0.7
PTP4A3-201ENST00000329397 EXOC1Q9NV70 894 aa19.43■□□□□ 0.7
PTP4A3-201ENST00000329397 FLT1P17948 1338 aa19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 MYH1P12882 1939 aa19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 EIF3JO75822 258 aaKnown RBP19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 EEF1GP26641 437 aaKnown RBP19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 C2orf54Q08AI8 447 aa19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 USP17L2Q6R6M4 530 aa19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 CAGE1Q8TC20 777 aa19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 UIMC1Q96RL1 719 aa19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 TMEM47Q9BQJ4 181 aa19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 JADE2Q9NQC1 790 aa19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 NUTM2BA6NNL0 878 aaPredicted RBP19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 NUTM2EB1AL46 878 aaPredicted RBP19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 TULP2O00295 520 aa19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 PSMD14O00487 310 aa19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 EPHB6O15197 1021 aa19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 NAPAP54920 295 aa19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 GRM4Q14833 912 aa19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 SMARCAL1Q9NZC9 954 aa19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 COL14A1Q05707 1796 aaKnown RBP19.42■□□□□ 0.7
PTP4A3-201ENST00000329397 ANKRD65E5RJM6 399 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 ZNF263O14978 683 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 SRGNP10124 158 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 SBK1Q52WX2 424 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 NBPF5PQ86XG9 351 aaPredicted RBP19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 NOC4LQ9BVI4 516 aaKnown RBP19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 TRIM9Q9C026 710 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 TTYH3Q9C0H2 523 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 THAP9Q9H5L6 903 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 SPATA31A1Q5TZJ5 1347 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 DNM2P50570 870 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 USP14P54578 494 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 TUBB2AQ13885 445 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 HSP90B2PQ58FF3 399 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 FKBP15Q5T1M5 1219 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 P2RX5Q93086 422 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 TUBB2BQ9BVA1 445 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 FAM204AQ9H8W3 233 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 FAM207AQ9NSI2 230 aaPredicted RBP19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 BARHL2Q9NY43 387 aa19.41■□□□□ 0.7
PTP4A3-201ENST00000329397 A0A1W2PQC6 194 aa19.4■□□□□ 0.7
PTP4A3-201ENST00000329397 KLRF2D3W0D1 207 aa19.4■□□□□ 0.7
PTP4A3-201ENST00000329397 AMIGO3Q86WK7 504 aa19.4■□□□□ 0.7
PTP4A3-201ENST00000329397 NLRP3Q96P20 1036 aa19.4■□□□□ 0.7
PTP4A3-201ENST00000329397 TMEM260Q9NX78 707 aa19.4■□□□□ 0.7
PTP4A3-201ENST00000329397 LRWD1Q9UFC0 647 aa19.4■□□□□ 0.7
PTP4A3-201ENST00000329397 COL16A1Q07092 1604 aaPredicted RBP19.4■□□□□ 0.7
PTP4A3-201ENST00000329397 IDEP14735 1019 aa19.4■□□□□ 0.7
PTP4A3-201ENST00000329397 KCNB1Q14721 858 aa19.4■□□□□ 0.7
PTP4A3-201ENST00000329397 EZH2Q15910 746 aaKnown RBP19.4■□□□□ 0.7
PTP4A3-201ENST00000329397 MIIPQ5JXC2 388 aa19.4■□□□□ 0.7
PTP4A3-201ENST00000329397 DYMQ7RTS9 669 aa19.4■□□□□ 0.7
PTP4A3-201ENST00000329397 C10orf67Q8IYJ2 551 aa19.4■□□□□ 0.7
PTP4A3-201ENST00000329397 KIAA0895Q8NCT3 520 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms