RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 GPIHBP1Q8IV16 184 aa16.95■□□□□ 0.3
CSDC2-201ENST00000306149 CCSER1Q9C0I3 900 aa16.95■□□□□ 0.3
CSDC2-201ENST00000306149 STIM1Q13586 685 aa16.95■□□□□ 0.3
CSDC2-201ENST00000306149 ANKRD40Q6AI12 368 aa16.95■□□□□ 0.3
CSDC2-201ENST00000306149 TUBGCP2Q9BSJ2 902 aa16.95■□□□□ 0.3
CSDC2-201ENST00000306149 TCP11L1Q9NUJ3 509 aa16.95■□□□□ 0.3
CSDC2-201ENST00000306149 TMEM260Q9NX78 707 aa16.95■□□□□ 0.3
CSDC2-201ENST00000306149 MAGEC2Q9UBF1 373 aaPredicted RBP16.95■□□□□ 0.3
CSDC2-201ENST00000306149 FLT1P17948 1338 aa16.95■□□□□ 0.3
CSDC2-201ENST00000306149 ASIC1P78348 528 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 KCNB1Q14721 858 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 MSL3Q8N5Y2 521 aaKnown RBP16.94■□□□□ 0.3
CSDC2-201ENST00000306149 NEK11Q8NG66 645 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 PIGSQ96S52 555 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 RTFDC1Q9BY42 306 aaPredicted RBP16.94■□□□□ 0.3
CSDC2-201ENST00000306149 H3BQF6 201 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 OR52Z1P0C646 297 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 ERCC3P19447 782 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 GPS2Q13227 327 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 DAGLBQ8NCG7 672 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 PCMTD1Q96MG8 357 aaPredicted RBP16.94■□□□□ 0.3
CSDC2-201ENST00000306149 ABCB6Q9NP58 842 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 MYO6Q9UM54 1294 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 CTAGE15A4D2H0 777 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 SRGAP2O75044 1071 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 CTAGE8P0CG41 777 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 EEF1GP26641 437 aaKnown RBP16.94■□□□□ 0.3
CSDC2-201ENST00000306149 RFC4P35249 363 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 HERVK_113P62684 666 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 VSNL1P62760 191 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 GRAPQ13588 217 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 CTAGE6Q86UF2 777 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 CTAGE4Q8IX94 777 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 TEX11Q8IYF3 940 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 GRAPLQ8TC17 118 aaPredicted RBP16.94■□□□□ 0.3
CSDC2-201ENST00000306149 TBCKQ8TEA7 893 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 CEP95Q96GE4 821 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 NGLY1Q96IV0 654 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 TRIM9Q9C026 710 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 ZMYND12Q9H0C1 365 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 THAP9Q9H5L6 903 aa16.94■□□□□ 0.3
CSDC2-201ENST00000306149 RASSF10A6NK89 507 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 TRIM21P19474 475 aaKnown RBP16.93■□□□□ 0.3
CSDC2-201ENST00000306149 TXKP42681 527 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 GPSM2P81274 684 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 TBC1D8BQ0IIM8 1120 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 NONOQ15233 471 aaKnown RBP eCLIP16.93■□□□□ 0.3
CSDC2-201ENST00000306149 WHAMMP3Q1A5X7 153 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 BEND6Q5SZJ8 279 aaPredicted RBP16.93■□□□□ 0.3
CSDC2-201ENST00000306149 RC3H1Q5TC82 1133 aaKnown RBP16.93■□□□□ 0.3
CSDC2-201ENST00000306149 EP400Q96L91 3159 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 FRMPD2Q68DX3 1309 aaPredicted RBP16.93■□□□□ 0.3
CSDC2-201ENST00000306149 USP17L5A8MUK1 530 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 PPP4CP60510 307 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 GSTO1P78417 241 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 TSR1Q2NL82 804 aaKnown RBP16.93■□□□□ 0.3
CSDC2-201ENST00000306149 CCDC122Q5T0U0 273 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 ZNF804AQ7Z570 1209 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 POTEDQ86YR6 584 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 DNAJC7Q99615 494 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 SLC39A2Q9NP94 309 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 EXOC1Q9NV70 894 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 CAPN11Q9UMQ6 739 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 LEMD3Q9Y2U8 911 aa16.93■□□□□ 0.3
CSDC2-201ENST00000306149 RCCD1A6NED2 376 aa16.92■□□□□ 0.3
CSDC2-201ENST00000306149 ERLIN1O75477 346 aa16.92■□□□□ 0.3
CSDC2-201ENST00000306149 HNRNPH2P55795 449 aaKnown RBP16.92■□□□□ 0.3
CSDC2-201ENST00000306149 EIF6P56537 245 aaKnown RBP16.92■□□□□ 0.3
CSDC2-201ENST00000306149 AMPD2Q01433 879 aa16.92■□□□□ 0.3
CSDC2-201ENST00000306149 P2RX5Q93086 422 aa16.92■□□□□ 0.3
CSDC2-201ENST00000306149 CNOT6LQ96LI5 555 aaKnown RBP16.92■□□□□ 0.3
CSDC2-201ENST00000306149 PSD3Q9NYI0 1048 aa16.92■□□□□ 0.3
CSDC2-201ENST00000306149 DUSP10Q9Y6W6 482 aa16.92■□□□□ 0.3
CSDC2-201ENST00000306149 ROBO3Q96MS0 1386 aa16.92■□□□□ 0.3
CSDC2-201ENST00000306149 UFL1O94874 794 aa16.92■□□□□ 0.3
CSDC2-201ENST00000306149 MTIF2P46199 727 aaKnown RBP16.92■□□□□ 0.3
CSDC2-201ENST00000306149 CYP27A1Q02318 531 aa16.92■□□□□ 0.3
CSDC2-201ENST00000306149 MUM1L1Q5H9M0 696 aa16.92■□□□□ 0.3
CSDC2-201ENST00000306149 GALNT17Q6IS24 598 aa16.92■□□□□ 0.3
CSDC2-201ENST00000306149 HDXQ7Z353 690 aa16.92■□□□□ 0.3
CSDC2-201ENST00000306149 CLEC10AQ8IUN9 316 aa16.92■□□□□ 0.3
CSDC2-201ENST00000306149 MMTAG2Q9BU76 263 aaKnown RBP16.92■□□□□ 0.3
CSDC2-201ENST00000306149 LACRTQ9GZZ8 138 aa16.92■□□□□ 0.3
CSDC2-201ENST00000306149 PDE11AQ9HCR9 933 aa16.92■□□□□ 0.3
CSDC2-201ENST00000306149 TNRC6CQ9HCJ0 1690 aaKnown RBP16.91■□□□□ 0.3
CSDC2-201ENST00000306149 A0A1W2PQC6 194 aa16.91■□□□□ 0.3
CSDC2-201ENST00000306149 ATP1A1P05023 1023 aaKnown RBP16.91■□□□□ 0.3
CSDC2-201ENST00000306149 LDHCP07864 332 aa16.91■□□□□ 0.3
CSDC2-201ENST00000306149 DNM2P50570 870 aa16.91■□□□□ 0.3
CSDC2-201ENST00000306149 NEK8Q86SG6 692 aa16.91■□□□□ 0.3
CSDC2-201ENST00000306149 EXOC4Q96A65 974 aa16.91■□□□□ 0.3
CSDC2-201ENST00000306149 COA7Q96BR5 231 aa16.91■□□□□ 0.3
CSDC2-201ENST00000306149 RRP36Q96EU6 259 aaKnown RBP16.91■□□□□ 0.3
CSDC2-201ENST00000306149 CAPZA3Q96KX2 299 aa16.91■□□□□ 0.3
CSDC2-201ENST00000306149 C6orf50Q9HD87 102 aa16.91■□□□□ 0.3
CSDC2-201ENST00000306149 CD209Q9NNX6 404 aa16.91■□□□□ 0.3
CSDC2-201ENST00000306149 N4BP1O75113 896 aaKnown RBP16.91■□□□□ 0.3
CSDC2-201ENST00000306149 SRGNP10124 158 aa16.91■□□□□ 0.3
CSDC2-201ENST00000306149 PRPHP41219 470 aa16.91■□□□□ 0.3
CSDC2-201ENST00000306149 SOGA3Q5TF21 947 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms