RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 CLTBP09497 229 aa19.58■□□□□ 0.72
TRAPPC1-201ENST00000303731 C6orf222P0C671 652 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC1-201ENST00000303731 SNHG28P0DPA3 235 aa19.58■□□□□ 0.72
TRAPPC1-201ENST00000303731 KCNA10Q16322 511 aa19.58■□□□□ 0.72
TRAPPC1-201ENST00000303731 IMMTQ16891 758 aaKnown RBP19.58■□□□□ 0.72
TRAPPC1-201ENST00000303731 CCSAPQ6IQ19 270 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC1-201ENST00000303731 RASGRP2Q7LDG7 609 aa19.58■□□□□ 0.72
TRAPPC1-201ENST00000303731 ANKRD33Q7Z3H0 272 aa19.58■□□□□ 0.72
TRAPPC1-201ENST00000303731 KATNBL1Q9H079 304 aa19.58■□□□□ 0.72
TRAPPC1-201ENST00000303731 ADD3Q9UEY8 706 aaKnown RBP19.58■□□□□ 0.72
TRAPPC1-201ENST00000303731 NEDD4P46934 1319 aa19.57■□□□□ 0.72
TRAPPC1-201ENST00000303731 SOWAHBA6NEL2 793 aa19.57■□□□□ 0.72
TRAPPC1-201ENST00000303731 NKX3-2P78367 333 aa19.57■□□□□ 0.72
TRAPPC1-201ENST00000303731 ZNF543Q08ER8 600 aa19.57■□□□□ 0.72
TRAPPC1-201ENST00000303731 MUM1L1Q5H9M0 696 aa19.57■□□□□ 0.72
TRAPPC1-201ENST00000303731 FRMPD2Q68DX3 1309 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC1-201ENST00000303731 WDR19Q8NEZ3 1342 aa19.56■□□□□ 0.72
TRAPPC1-201ENST00000303731 DCDC2CA8MYV0 355 aa19.56■□□□□ 0.72
TRAPPC1-201ENST00000303731 SLC16A2P36021 539 aa19.56■□□□□ 0.72
TRAPPC1-201ENST00000303731 SNAP25P60880 206 aa19.56■□□□□ 0.72
TRAPPC1-201ENST00000303731 TNFAIP2Q03169 654 aa19.56■□□□□ 0.72
TRAPPC1-201ENST00000303731 TTBK2Q6IQ55 1244 aa19.56■□□□□ 0.72
TRAPPC1-201ENST00000303731 NSMFQ6X4W1 530 aa19.56■□□□□ 0.72
TRAPPC1-201ENST00000303731 KRT23Q9C075 422 aa19.56■□□□□ 0.72
TRAPPC1-201ENST00000303731 MAF1Q9H063 256 aa19.56■□□□□ 0.72
TRAPPC1-201ENST00000303731 CNNM2Q9H8M5 875 aa19.56■□□□□ 0.72
TRAPPC1-201ENST00000303731 VTA1Q9NP79 307 aa19.56■□□□□ 0.72
TRAPPC1-201ENST00000303731 GPCPD1Q9NPB8 672 aa19.56■□□□□ 0.72
TRAPPC1-201ENST00000303731 LRRC37A2A6NM11 1700 aa19.56■□□□□ 0.72
TRAPPC1-201ENST00000303731 RAD50Q92878 1312 aa19.55■□□□□ 0.72
TRAPPC1-201ENST00000303731 KIAA0355O15063 1070 aa19.55■□□□□ 0.72
TRAPPC1-201ENST00000303731 PQBP1O60828 265 aaKnown RBP19.55■□□□□ 0.72
TRAPPC1-201ENST00000303731 ASGR1P07306 291 aa19.55■□□□□ 0.72
TRAPPC1-201ENST00000303731 GNASQ5JWF2 1037 aa19.55■□□□□ 0.72
TRAPPC1-201ENST00000303731 MORC4Q8TE76 937 aa19.55■□□□□ 0.72
TRAPPC1-201ENST00000303731 ANKS1AQ92625 1134 aa19.55■□□□□ 0.72
TRAPPC1-201ENST00000303731 BADQ92934 168 aa19.55■□□□□ 0.72
TRAPPC1-201ENST00000303731 MPHOSPH6Q99547 160 aaKnown RBP19.55■□□□□ 0.72
TRAPPC1-201ENST00000303731 SEZ6LQ9BYH1 1024 aa19.55■□□□□ 0.72
TRAPPC1-201ENST00000303731 Q9Y3F1 56 aa19.55■□□□□ 0.72
TRAPPC1-201ENST00000303731 A0A0U1RQG5 324 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC1-201ENST00000303731 TRIM43BA6NCK2 446 aa19.54■□□□□ 0.72
TRAPPC1-201ENST00000303731 ADCY6O43306 1168 aa19.54■□□□□ 0.72
TRAPPC1-201ENST00000303731 KDM4AO75164 1064 aa19.54■□□□□ 0.72
TRAPPC1-201ENST00000303731 CABYRO75952 493 aa19.54■□□□□ 0.72
TRAPPC1-201ENST00000303731 IQSEC1Q6DN90 963 aa19.54■□□□□ 0.72
TRAPPC1-201ENST00000303731 DEFB123Q8N688 67 aa19.54■□□□□ 0.72
TRAPPC1-201ENST00000303731 PNMA1Q8ND90 353 aa19.54■□□□□ 0.72
TRAPPC1-201ENST00000303731 TRIM43Q96BQ3 446 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC1-201ENST00000303731 KAT14Q9H8E8 782 aa19.54■□□□□ 0.72
TRAPPC1-201ENST00000303731 TMEM39AQ9NV64 488 aa19.54■□□□□ 0.72
TRAPPC1-201ENST00000303731 LCTP09848 1927 aa19.54■□□□□ 0.72
TRAPPC1-201ENST00000303731 MYADML2A6NDP7 307 aa19.53■□□□□ 0.72
TRAPPC1-201ENST00000303731 ZEB2O60315 1214 aa19.53■□□□□ 0.72
TRAPPC1-201ENST00000303731 RAG1P15918 1043 aa19.53■□□□□ 0.72
TRAPPC1-201ENST00000303731 TTC22Q5TAA0 569 aa19.53■□□□□ 0.72
TRAPPC1-201ENST00000303731 FAM109BQ6ICB4 259 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC1-201ENST00000303731 NOL8Q76FK4 1167 aaKnown RBP19.53■□□□□ 0.72
TRAPPC1-201ENST00000303731 SH3RF1Q7Z6J0 888 aa19.53■□□□□ 0.72
TRAPPC1-201ENST00000303731 RUFY2Q8WXA3 655 aa19.53■□□□□ 0.72
TRAPPC1-201ENST00000303731 ZSCAN10Q96SZ4 725 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC1-201ENST00000303731 AP5M1Q9H0R1 490 aa19.53■□□□□ 0.72
TRAPPC1-201ENST00000303731 GNEQ9Y223 722 aaKnown RBP19.53■□□□□ 0.72
TRAPPC1-201ENST00000303731 ASTN1O14525 1302 aa19.52■□□□□ 0.72
TRAPPC1-201ENST00000303731 PTPDC1A2A3K4 754 aa19.52■□□□□ 0.72
TRAPPC1-201ENST00000303731 B4DLN1 442 aa19.52■□□□□ 0.72
TRAPPC1-201ENST00000303731 ALDH5A1P51649 535 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC1-201ENST00000303731 MRPL12P52815 198 aaKnown RBP19.52■□□□□ 0.72
TRAPPC1-201ENST00000303731 BAATQ14032 418 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC1-201ENST00000303731 ASPRV1Q53RT3 343 aa19.52■□□□□ 0.72
TRAPPC1-201ENST00000303731 RNF207Q6ZRF8 634 aa19.52■□□□□ 0.72
TRAPPC1-201ENST00000303731 TLK2Q86UE8 772 aa19.52■□□□□ 0.72
TRAPPC1-201ENST00000303731 VTI1AQ96AJ9 217 aa19.52■□□□□ 0.72
TRAPPC1-201ENST00000303731 ZKSCAN3Q9BRR0 538 aa19.52■□□□□ 0.72
TRAPPC1-201ENST00000303731 B4E1Z4 1266 aa19.51■□□□□ 0.71
TRAPPC1-201ENST00000303731 ARVCFO00192 962 aa19.51■□□□□ 0.71
TRAPPC1-201ENST00000303731 NFIBO00712 420 aa19.51■□□□□ 0.71
TRAPPC1-201ENST00000303731 TLR3O15455 904 aaKnown RBP19.51■□□□□ 0.71
TRAPPC1-201ENST00000303731 CDK7P50613 346 aa19.51■□□□□ 0.71
TRAPPC1-201ENST00000303731 FAAP100Q0VG06 881 aa19.51■□□□□ 0.71
TRAPPC1-201ENST00000303731 FSCN1Q16658 493 aaKnown RBP19.51■□□□□ 0.71
TRAPPC1-201ENST00000303731 RGS22Q8NE09 1264 aa19.51■□□□□ 0.71
TRAPPC1-201ENST00000303731 DNERQ8NFT8 737 aa19.51■□□□□ 0.71
TRAPPC1-201ENST00000303731 UBAC1Q9BSL1 405 aa19.51■□□□□ 0.71
TRAPPC1-201ENST00000303731 ZSWIM5Q9P217 1185 aa19.51■□□□□ 0.71
TRAPPC1-201ENST00000303731 LAMA2P24043 3122 aaKnown RBP19.5■□□□□ 0.71
TRAPPC1-201ENST00000303731 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC1-201ENST00000303731 CTAGE5O15320 804 aa19.5■□□□□ 0.71
TRAPPC1-201ENST00000303731 PDE4AP27815 886 aa19.5■□□□□ 0.71
TRAPPC1-201ENST00000303731 FPGSQ05932 587 aa19.5■□□□□ 0.71
TRAPPC1-201ENST00000303731 TAPT1Q6NXT6 567 aa19.5■□□□□ 0.71
TRAPPC1-201ENST00000303731 FBXO16Q8IX29 292 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC1-201ENST00000303731 ENAHQ8N8S7 591 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC1-201ENST00000303731 CLEC4DQ8WXI8 215 aa19.5■□□□□ 0.71
TRAPPC1-201ENST00000303731 TNKSO95271 1327 aa19.5■□□□□ 0.71
TRAPPC1-201ENST00000303731 TIMP1P01033 207 aa19.49■□□□□ 0.71
TRAPPC1-201ENST00000303731 GSPT1P15170 499 aaKnown RBP19.49■□□□□ 0.71
TRAPPC1-201ENST00000303731 SMPD1P17405 629 aa19.49■□□□□ 0.71
TRAPPC1-201ENST00000303731 CALML3P27482 149 aa19.49■□□□□ 0.71
TRAPPC1-201ENST00000303731 TRDNQ13061 729 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms