RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 LRIT3Q3SXY7 679 aa21.41■■□□□ 1.02
TMEM88-201ENST00000301599 GPATCH4Q5T3I0 446 aaKnown RBP21.41■■□□□ 1.02
TMEM88-201ENST00000301599 PCSK9Q8NBP7 692 aaKnown RBP21.41■■□□□ 1.02
TMEM88-201ENST00000301599 RUFY2Q8WXA3 655 aa21.41■■□□□ 1.02
TMEM88-201ENST00000301599 CNNM2Q9H8M5 875 aa21.41■■□□□ 1.02
TMEM88-201ENST00000301599 ZSWIM5Q9P217 1185 aa21.41■■□□□ 1.02
TMEM88-201ENST00000301599 B4E1Z4 1266 aa21.4■■□□□ 1.02
TMEM88-201ENST00000301599 ZSCAN10Q96SZ4 725 aaPredicted RBP21.4■■□□□ 1.02
TMEM88-201ENST00000301599 KATNBL1Q9H079 304 aa21.4■■□□□ 1.02
TMEM88-201ENST00000301599 KAT14Q9H8E8 782 aa21.4■■□□□ 1.02
TMEM88-201ENST00000301599 PRDM5Q9NQX1 630 aaPredicted RBP21.4■■□□□ 1.02
TMEM88-201ENST00000301599 C6orf222P0C671 652 aaPredicted RBP21.39■■□□□ 1.01
TMEM88-201ENST00000301599 GSPT1P15170 499 aaKnown RBP21.39■■□□□ 1.01
TMEM88-201ENST00000301599 GJA9P57773 515 aa21.39■■□□□ 1.01
TMEM88-201ENST00000301599 TNFAIP2Q03169 654 aa21.39■■□□□ 1.01
TMEM88-201ENST00000301599 BAATQ14032 418 aaPredicted RBP21.39■■□□□ 1.01
TMEM88-201ENST00000301599 CCSAPQ6IQ19 270 aaPredicted RBP21.39■■□□□ 1.01
TMEM88-201ENST00000301599 PNMA1Q8ND90 353 aa21.39■■□□□ 1.01
TMEM88-201ENST00000301599 LRCH3Q96II8 777 aa21.39■■□□□ 1.01
TMEM88-201ENST00000301599 UPF3AQ9H1J1 476 aaKnown RBP21.39■■□□□ 1.01
TMEM88-201ENST00000301599 STARD7Q9NQZ5 370 aa21.39■■□□□ 1.01
TMEM88-201ENST00000301599 ADD3Q9UEY8 706 aaKnown RBP21.39■■□□□ 1.01
TMEM88-201ENST00000301599 CST5P28325 142 aaPredicted RBP21.38■■□□□ 1.01
TMEM88-201ENST00000301599 GNASQ5JWF2 1037 aa21.38■■□□□ 1.01
TMEM88-201ENST00000301599 IQSEC1Q6DN90 963 aa21.38■■□□□ 1.01
TMEM88-201ENST00000301599 GPR153Q6NV75 609 aa21.38■■□□□ 1.01
TMEM88-201ENST00000301599 NOL8Q76FK4 1167 aaKnown RBP21.38■■□□□ 1.01
TMEM88-201ENST00000301599 DNAH12Q6ZR08 3092 aa21.37■■□□□ 1.01
TMEM88-201ENST00000301599 ELP1O95163 1332 aa21.37■■□□□ 1.01
TMEM88-201ENST00000301599 RAD50Q92878 1312 aa21.37■■□□□ 1.01
TMEM88-201ENST00000301599 ADCY6O43306 1168 aa21.37■■□□□ 1.01
TMEM88-201ENST00000301599 GOLGA8HP0CJ92 632 aa21.37■■□□□ 1.01
TMEM88-201ENST00000301599 CHMLP26374 656 aa21.37■■□□□ 1.01
TMEM88-201ENST00000301599 VTI1AQ96AJ9 217 aa21.37■■□□□ 1.01
TMEM88-201ENST00000301599 GLT1D1Q96MS3 346 aa21.37■■□□□ 1.01
TMEM88-201ENST00000301599 TOX2Q96NM4 488 aa21.37■■□□□ 1.01
TMEM88-201ENST00000301599 PDLIM7Q9NR12 457 aa21.37■■□□□ 1.01
TMEM88-201ENST00000301599 WDR19Q8NEZ3 1342 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 LOC102724159A0A0B4J2E5 919 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 PTPDC1A2A3K4 754 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 TRIM43BA6NCK2 446 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 MYADML2A6NDP7 307 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 DCDC2CA8MYV0 355 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 NFIBO00712 420 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 ASGR1P07306 291 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 CLTBP09497 229 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 NKX3-2P78367 333 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 PWP2Q15269 919 aaKnown RBP21.36■■□□□ 1.01
TMEM88-201ENST00000301599 SH3RF1Q7Z6J0 888 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 ENAHQ8N8S7 591 aaPredicted RBP21.36■■□□□ 1.01
TMEM88-201ENST00000301599 MORC4Q8TE76 937 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 CLEC4DQ8WXI8 215 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 TRIM43Q96BQ3 446 aaPredicted RBP21.36■■□□□ 1.01
TMEM88-201ENST00000301599 UBAC1Q9BSL1 405 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 UBA5Q9GZZ9 404 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 IL25Q9H293 177 aa21.36■■□□□ 1.01
TMEM88-201ENST00000301599 PQBP1O60828 265 aaKnown RBP21.35■■□□□ 1.01
TMEM88-201ENST00000301599 RNF207Q6ZRF8 634 aa21.35■■□□□ 1.01
TMEM88-201ENST00000301599 ANKRD33Q7Z3H0 272 aa21.35■■□□□ 1.01
TMEM88-201ENST00000301599 BADQ92934 168 aa21.35■■□□□ 1.01
TMEM88-201ENST00000301599 PURBQ96QR8 312 aaKnown RBP21.35■■□□□ 1.01
TMEM88-201ENST00000301599 AP5M1Q9H0R1 490 aa21.35■■□□□ 1.01
TMEM88-201ENST00000301599 VTA1Q9NP79 307 aa21.35■■□□□ 1.01
TMEM88-201ENST00000301599 ASTN1O14525 1302 aa21.34■■□□□ 1.01
TMEM88-201ENST00000301599 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.34■■□□□ 1.01
TMEM88-201ENST00000301599 CALML3P27482 149 aa21.34■■□□□ 1.01
TMEM88-201ENST00000301599 IRX5P78411 483 aaPredicted RBP21.34■■□□□ 1.01
TMEM88-201ENST00000301599 TRDNQ13061 729 aa21.34■■□□□ 1.01
TMEM88-201ENST00000301599 ASPRV1Q53RT3 343 aa21.34■■□□□ 1.01
TMEM88-201ENST00000301599 TAPT1Q6NXT6 567 aa21.34■■□□□ 1.01
TMEM88-201ENST00000301599 EEPD1Q7L9B9 569 aa21.34■■□□□ 1.01
TMEM88-201ENST00000301599 RGS22Q8NE09 1264 aa21.34■■□□□ 1.01
TMEM88-201ENST00000301599 PDGFCQ9NRA1 345 aa21.34■■□□□ 1.01
TMEM88-201ENST00000301599 TMEM39AQ9NV64 488 aa21.34■■□□□ 1.01
TMEM88-201ENST00000301599 GNEQ9Y223 722 aaKnown RBP21.34■■□□□ 1.01
TMEM88-201ENST00000301599 Q9Y3F1 56 aa21.34■■□□□ 1.01
TMEM88-201ENST00000301599 U3KPZ7 1027 aaPredicted RBP21.34■■□□□ 1.01
TMEM88-201ENST00000301599 TNKSO95271 1327 aa21.33■■□□□ 1.01
TMEM88-201ENST00000301599 KIAA0355O15063 1070 aa21.33■■□□□ 1.01
TMEM88-201ENST00000301599 CTAGE5O15320 804 aa21.33■■□□□ 1.01
TMEM88-201ENST00000301599 DYNC1LI2O43237 492 aaPredicted RBP21.33■■□□□ 1.01
TMEM88-201ENST00000301599 PARP1P09874 1014 aaKnown RBP21.33■■□□□ 1.01
TMEM88-201ENST00000301599 SMPD1P17405 629 aa21.33■■□□□ 1.01
TMEM88-201ENST00000301599 ALDH5A1P51649 535 aaPredicted RBP21.33■■□□□ 1.01
TMEM88-201ENST00000301599 IFIT1BQ5T764 474 aaKnown RBP21.33■■□□□ 1.01
TMEM88-201ENST00000301599 KIAA1211Q6ZU35 1233 aa21.33■■□□□ 1.01
TMEM88-201ENST00000301599 MPHOSPH6Q99547 160 aaKnown RBP21.33■■□□□ 1.01
TMEM88-201ENST00000301599 MAF1Q9H063 256 aa21.33■■□□□ 1.01
TMEM88-201ENST00000301599 DDX49Q9Y6V7 483 aaKnown RBP21.33■■□□□ 1.01
TMEM88-201ENST00000301599 MROH7Q68CQ1 1323 aa21.32■■□□□ 1
TMEM88-201ENST00000301599 B4DLN1 442 aa21.32■■□□□ 1
TMEM88-201ENST00000301599 ZEB2O60315 1214 aa21.32■■□□□ 1
TMEM88-201ENST00000301599 RAG1P15918 1043 aa21.32■■□□□ 1
TMEM88-201ENST00000301599 CDK7P50613 346 aa21.32■■□□□ 1
TMEM88-201ENST00000301599 MRPL12P52815 198 aaKnown RBP21.32■■□□□ 1
TMEM88-201ENST00000301599 RPS6P62753 249 aaKnown RBP21.32■■□□□ 1
TMEM88-201ENST00000301599 PTH1RQ03431 593 aa21.32■■□□□ 1
TMEM88-201ENST00000301599 FAAP100Q0VG06 881 aa21.32■■□□□ 1
TMEM88-201ENST00000301599 ADGRF4Q8IZF3 695 aa21.32■■□□□ 1
TMEM88-201ENST00000301599 CPVLQ9H3G5 476 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms