RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 DDX11Q96FC9 970 aa18.78■□□□□ 0.6
UBXN1-201ENST00000294119 DBNDD2Q9BQY9 259 aa18.78■□□□□ 0.6
UBXN1-201ENST00000294119 RWDD1Q9H446 243 aaPredicted RBP18.78■□□□□ 0.6
UBXN1-201ENST00000294119 VPS13AQ96RL7 3174 aa18.77■□□□□ 0.6
UBXN1-201ENST00000294119 SIP14410 1827 aa18.77■□□□□ 0.6
UBXN1-201ENST00000294119 MYH8P13535 1937 aa18.77■□□□□ 0.6
UBXN1-201ENST00000294119 ATP2A1O14983 1001 aa18.77■□□□□ 0.6
UBXN1-201ENST00000294119 PTPN5P54829 565 aa18.77■□□□□ 0.6
UBXN1-201ENST00000294119 DEFB128Q7Z7B8 93 aa18.77■□□□□ 0.6
UBXN1-201ENST00000294119 CCDC136Q96JN2 1154 aa18.77■□□□□ 0.6
UBXN1-201ENST00000294119 PRKAG3Q9UGI9 489 aa18.77■□□□□ 0.6
UBXN1-201ENST00000294119 POLR3DP05423 398 aaPredicted RBP18.76■□□□□ 0.59
UBXN1-201ENST00000294119 AKR1B1P15121 316 aa18.76■□□□□ 0.59
UBXN1-201ENST00000294119 PSMC6P62333 389 aa18.76■□□□□ 0.59
UBXN1-201ENST00000294119 ATP8B2P98198 1209 aa18.76■□□□□ 0.59
UBXN1-201ENST00000294119 TNFAIP2Q03169 654 aa18.76■□□□□ 0.59
UBXN1-201ENST00000294119 HDAC1Q13547 482 aaPredicted RBP18.76■□□□□ 0.59
UBXN1-201ENST00000294119 COL19A1Q14993 1142 aa18.76■□□□□ 0.59
UBXN1-201ENST00000294119 CCDC158Q5M9N0 1113 aa18.76■□□□□ 0.59
UBXN1-201ENST00000294119 TLK2Q86UE8 772 aa18.76■□□□□ 0.59
UBXN1-201ENST00000294119 CCDC144CPQ8IYA2 1237 aa18.76■□□□□ 0.59
UBXN1-201ENST00000294119 ALG13Q9NP73 1137 aaKnown RBP18.76■□□□□ 0.59
UBXN1-201ENST00000294119 BAIAP3O94812 1187 aa18.75■□□□□ 0.59
UBXN1-201ENST00000294119 CYP2C9P11712 490 aa18.75■□□□□ 0.59
UBXN1-201ENST00000294119 ERVK-21P61565 698 aa18.75■□□□□ 0.59
UBXN1-201ENST00000294119 TCF15Q12870 199 aa18.75■□□□□ 0.59
UBXN1-201ENST00000294119 TNNI3KQ59H18 835 aa18.75■□□□□ 0.59
UBXN1-201ENST00000294119 SNRNP48Q6IEG0 339 aaKnown RBP18.75■□□□□ 0.59
UBXN1-201ENST00000294119 BMP8AQ7Z5Y6 402 aa18.75■□□□□ 0.59
UBXN1-201ENST00000294119 TRMT13Q9NUP7 481 aaKnown RBP18.75■□□□□ 0.59
UBXN1-201ENST00000294119 SWAP70Q9UH65 585 aa18.75■□□□□ 0.59
UBXN1-201ENST00000294119 PCDHB15Q9Y5E8 787 aa18.75■□□□□ 0.59
UBXN1-201ENST00000294119 FPGT-TNNI3KV9GXZ4 949 aa18.75■□□□□ 0.59
UBXN1-201ENST00000294119 TNKSO95271 1327 aa18.74■□□□□ 0.59
UBXN1-201ENST00000294119 PITPNM1O00562 1244 aa18.74■□□□□ 0.59
UBXN1-201ENST00000294119 SUPT20HL2P0C7V6 817 aa18.74■□□□□ 0.59
UBXN1-201ENST00000294119 PTGS1P23219 599 aa18.74■□□□□ 0.59
UBXN1-201ENST00000294119 IER5LQ5T953 404 aa18.74■□□□□ 0.59
UBXN1-201ENST00000294119 CEP85Q6P2H3 762 aa18.74■□□□□ 0.59
UBXN1-201ENST00000294119 IDH1O75874 414 aaKnown RBP18.73■□□□□ 0.59
UBXN1-201ENST00000294119 IQCF3P0C7M6 154 aa18.73■□□□□ 0.59
UBXN1-201ENST00000294119 HERC4Q5GLZ8 1057 aaPredicted RBP18.73■□□□□ 0.59
UBXN1-201ENST00000294119 Q9Y3F1 56 aa18.73■□□□□ 0.59
UBXN1-201ENST00000294119 PTPRZ1P23471 2315 aaPredicted RBP18.73■□□□□ 0.59
UBXN1-201ENST00000294119 SCN10AQ9Y5Y9 1956 aa18.72■□□□□ 0.59
UBXN1-201ENST00000294119 KMT2EQ8IZD2 1858 aa18.72■□□□□ 0.59
UBXN1-201ENST00000294119 GFRA3O60609 400 aa18.72■□□□□ 0.59
UBXN1-201ENST00000294119 EEF2P13639 858 aaKnown RBP18.72■□□□□ 0.59
UBXN1-201ENST00000294119 SMPD1P17405 629 aa18.72■□□□□ 0.59
UBXN1-201ENST00000294119 IRS1P35568 1242 aa18.72■□□□□ 0.59
UBXN1-201ENST00000294119 G3BP1Q13283 466 aaKnown RBP eCLIP18.72■□□□□ 0.59
UBXN1-201ENST00000294119 POLA2Q14181 598 aa18.72■□□□□ 0.59
UBXN1-201ENST00000294119 FAM83BQ5T0W9 1011 aa18.72■□□□□ 0.59
UBXN1-201ENST00000294119 ADHFE1Q8IWW8 467 aa18.72■□□□□ 0.59
UBXN1-201ENST00000294119 FAM133AQ8N9E0 248 aa18.72■□□□□ 0.59
UBXN1-201ENST00000294119 SSH3Q8TE77 659 aa18.72■□□□□ 0.59
UBXN1-201ENST00000294119 PRRX2Q99811 253 aa18.72■□□□□ 0.59
UBXN1-201ENST00000294119 C1orf115Q9H7X2 142 aa18.72■□□□□ 0.59
UBXN1-201ENST00000294119 MCM9Q9NXL9 1143 aa18.72■□□□□ 0.59
UBXN1-201ENST00000294119 GREB1LQ9C091 1923 aaPredicted RBP18.71■□□□□ 0.59
UBXN1-201ENST00000294119 PNMA6EA0A0J9YXQ4 647 aa18.71■□□□□ 0.59
UBXN1-201ENST00000294119 ZEB2O60315 1214 aa18.71■□□□□ 0.59
UBXN1-201ENST00000294119 CYP2D6P10635 497 aa18.71■□□□□ 0.59
UBXN1-201ENST00000294119 CCDC17Q96LX7 622 aa18.71■□□□□ 0.59
UBXN1-201ENST00000294119 TGS1Q96RS0 853 aaKnown RBP18.71■□□□□ 0.59
UBXN1-201ENST00000294119 SLF1Q9BQI6 1058 aa18.71■□□□□ 0.59
UBXN1-201ENST00000294119 DCP1AQ9NPI6 582 aaPredicted RBP18.71■□□□□ 0.59
UBXN1-201ENST00000294119 DBNLQ9UJU6 430 aaKnown RBP18.71■□□□□ 0.59
UBXN1-201ENST00000294119 LINC01553A4QN01 128 aa18.7■□□□□ 0.58
UBXN1-201ENST00000294119 H3BQ06 376 aaPredicted RBP18.7■□□□□ 0.58
UBXN1-201ENST00000294119 DYNC1LI2O43237 492 aaPredicted RBP18.7■□□□□ 0.58
UBXN1-201ENST00000294119 WDR5P61964 334 aaKnown RBP18.7■□□□□ 0.58
UBXN1-201ENST00000294119 GPNMBQ14956 572 aa18.7■□□□□ 0.58
UBXN1-201ENST00000294119 CENPQQ7L2Z9 268 aaPredicted RBP18.7■□□□□ 0.58
UBXN1-201ENST00000294119 DYNLL2Q96FJ2 89 aa18.7■□□□□ 0.58
UBXN1-201ENST00000294119 ANTXR1Q9H6X2 564 aa18.7■□□□□ 0.58
UBXN1-201ENST00000294119 PLXNA3P51805 1871 aa18.69■□□□□ 0.58
UBXN1-201ENST00000294119 CNTN2Q02246 1040 aa18.69■□□□□ 0.58
UBXN1-201ENST00000294119 TMEM63BQ5T3F8 832 aa18.69■□□□□ 0.58
UBXN1-201ENST00000294119 TAPT1Q6NXT6 567 aa18.69■□□□□ 0.58
UBXN1-201ENST00000294119 ANKRD35Q8N283 1001 aa18.69■□□□□ 0.58
UBXN1-201ENST00000294119 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.69■□□□□ 0.58
UBXN1-201ENST00000294119 UPF3BQ9BZI7 483 aaKnown RBP18.69■□□□□ 0.58
UBXN1-201ENST00000294119 AP5M1Q9H0R1 490 aa18.69■□□□□ 0.58
UBXN1-201ENST00000294119 KANSL2Q9H9L4 492 aa18.69■□□□□ 0.58
UBXN1-201ENST00000294119 GOPCQ9HD26 462 aa18.69■□□□□ 0.58
UBXN1-201ENST00000294119 FBXO40Q9UH90 709 aa18.69■□□□□ 0.58
UBXN1-201ENST00000294119 DNAH14Q0VDD8 3507 aa18.68■□□□□ 0.58
UBXN1-201ENST00000294119 GJB5O95377 273 aa18.68■□□□□ 0.58
UBXN1-201ENST00000294119 HSP90AB4PQ58FF6 505 aa18.68■□□□□ 0.58
UBXN1-201ENST00000294119 ERMP1Q7Z2K6 904 aa18.68■□□□□ 0.58
UBXN1-201ENST00000294119 TMCO2Q7Z6W1 182 aaPredicted RBP18.68■□□□□ 0.58
UBXN1-201ENST00000294119 SIRT2Q8IXJ6 389 aa18.68■□□□□ 0.58
UBXN1-201ENST00000294119 CHST13Q8NET6 341 aa18.68■□□□□ 0.58
UBXN1-201ENST00000294119 PABPC5Q96DU9 382 aaKnown RBP18.68■□□□□ 0.58
UBXN1-201ENST00000294119 RAD9AQ99638 391 aa18.68■□□□□ 0.58
UBXN1-201ENST00000294119 SLC38A10Q9HBR0 1119 aa18.68■□□□□ 0.58
UBXN1-201ENST00000294119 RIF1Q5UIP0 2472 aaKnown RBP18.68■□□□□ 0.58
UBXN1-201ENST00000294119 MAGEB6P1A0A0J9YX57 407 aa18.67■□□□□ 0.58
UBXN1-201ENST00000294119 SOWAHBA6NEL2 793 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms