RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 ZNF827Q17R98 1081 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 RIOK1Q9BRS2 568 aaKnown RBP12.54□□□□□ -0.4
NIN-201ENST00000245441 SPZ1Q9BXG8 430 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 ALDH1B1P30837 517 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 ZYXQ15942 572 aaKnown RBP12.54□□□□□ -0.4
NIN-201ENST00000245441 MAGI2Q86UL8 1455 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 CCDC151A5D8V7 595 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 ATF2P15336 505 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 ARMC9Q7Z3E5 817 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 MIER3Q7Z3K6 550 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 K7ENM7 598 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 ADAM9Q13443 819 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 SUPT20HQ8NEM7 779 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.54□□□□□ -0.4
NIN-201ENST00000245441 COPRSQ9NQ92 184 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 RIPOR2Q9Y4F9 1068 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 UBE3CQ15386 1083 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 HADHQ16836 314 aaKnown RBP12.54□□□□□ -0.4
NIN-201ENST00000245441 CNOT6LQ96LI5 555 aaKnown RBP12.54□□□□□ -0.4
NIN-201ENST00000245441 LARSQ9P2J5 1176 aaKnown RBP12.54□□□□□ -0.4
NIN-201ENST00000245441 TNFAIP1Q13829 316 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 AOC3Q16853 763 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 ST7Q9NRC1 585 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 CDK12Q9NYV4 1490 aaPredicted RBP12.54□□□□□ -0.4
NIN-201ENST00000245441 EFCAB6Q5THR3 1501 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 EPHB4P54760 987 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 GPIHBP1Q8IV16 184 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 DEPTORQ8TB45 409 aa12.54□□□□□ -0.4
NIN-201ENST00000245441 CIAO1O76071 339 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 CLTAP09496 248 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 H2AFZP0C0S5 128 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 SATB1Q01826 763 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 H2AFVQ71UI9 128 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 CLIC4Q9Y696 253 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 AATKQ6ZMQ8 1374 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 MYH10P35580 1976 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 ARHGAP42A6NI28 874 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 POLR2BP30876 1174 aaKnown RBP12.53□□□□□ -0.4
NIN-201ENST00000245441 PDE6BP35913 854 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 NSMFQ6X4W1 530 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 TRIM50Q86XT4 487 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 H0YIN7 160 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 HOXA7P31268 230 aaPredicted RBP12.53□□□□□ -0.4
NIN-201ENST00000245441 CASP14P31944 242 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 EHHADHQ08426 723 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 SNCBQ16143 134 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 AFG3L2Q9Y4W6 797 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 PPARDQ03181 441 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 CMTR1Q8N1G2 835 aaKnown RBP12.53□□□□□ -0.4
NIN-201ENST00000245441 SDR42E1Q8WUS8 393 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 RABGAP1Q9Y3P9 1069 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 POLR2FP61218 127 aaKnown RBP12.53□□□□□ -0.4
NIN-201ENST00000245441 C10orf76Q5T2E6 689 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 RDH13Q8NBN7 331 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 PLEKHA4Q9H4M7 779 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 CDC42BPGQ6DT37 1551 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 BSPRYQ5W0U4 402 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 TRIM68Q6AZZ1 485 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 PDZD4Q76G19 769 aaPredicted RBP12.53□□□□□ -0.4
NIN-201ENST00000245441 KDM6BO15054 1643 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 LIG4P49917 911 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 SLC39A2Q9NP94 309 aa12.53□□□□□ -0.4
NIN-201ENST00000245441 GOLGA8QA0A0J9YX86 632 aa12.52□□□□□ -0.4
NIN-201ENST00000245441 GOLGA8OA6NCC3 632 aa12.52□□□□□ -0.4
NIN-201ENST00000245441 GOLGA8NF8WBI6 632 aa12.52□□□□□ -0.4
NIN-201ENST00000245441 BPIFB4P59827 614 aa12.52□□□□□ -0.4
NIN-201ENST00000245441 DBN1Q16643 649 aa12.52□□□□□ -0.4
NIN-201ENST00000245441 STAG1Q8WVM7 1258 aa12.52□□□□□ -0.4
NIN-201ENST00000245441 SETSIPP0DME0 302 aa12.52□□□□□ -0.4
NIN-201ENST00000245441 FAM26FQ5R3K3 315 aa12.52□□□□□ -0.4
NIN-201ENST00000245441 FAM102BQ5T8I3 360 aa12.52□□□□□ -0.4
NIN-201ENST00000245441 HECW2Q9P2P5 1572 aa12.52□□□□□ -0.4
NIN-201ENST00000245441 M0QZ92 97 aa12.52□□□□□ -0.4
NIN-201ENST00000245441 IQGAP3Q86VI3 1631 aa12.52□□□□□ -0.4
NIN-201ENST00000245441 NSFP46459 744 aaKnown RBP12.52□□□□□ -0.41
NIN-201ENST00000245441 HVCN1Q96D96 273 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 RNF14Q9UBS8 474 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 SAMD9LQ8IVG5 1584 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 ARHGEF16Q5VV41 709 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 EFCAB13Q8IY85 973 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 RFC1P35251 1148 aaPredicted RBP12.52□□□□□ -0.41
NIN-201ENST00000245441 CLIC6Q96NY7 704 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 PLEKHG3A1L390 1219 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 IL9RQ01113 521 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 CUL4BQ13620 913 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 DPCR1Q3MIW9 517 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 MUM1L1Q5H9M0 696 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 DNAJC10Q8IXB1 793 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 LRRC8CQ8TDW0 803 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 TRIM11Q96F44 468 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 MRPL11Q9Y3B7 192 aaKnown RBP12.52□□□□□ -0.41
NIN-201ENST00000245441 DTNBO60941 627 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 RASSF7Q02833 373 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 DMTNQ08495 405 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 RINT1Q6NUQ1 792 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 PPM1KQ8N3J5 372 aa12.52□□□□□ -0.41
NIN-201ENST00000245441 LARP4BQ92615 738 aaKnown RBP12.52□□□□□ -0.41
NIN-201ENST00000245441 GPKOWQ92917 476 aaPredicted RBP eCLIP12.52□□□□□ -0.41
NIN-201ENST00000245441 TACO1Q9BSH4 297 aaKnown RBP12.52□□□□□ -0.41
NIN-201ENST00000245441 PCDHA5Q9Y5H7 936 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms