RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Gprc5cQ8K3J9 440 aa16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 IrgqQ8VIM9 583 aa16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Yeats4Q9CR11 227 aaKnown RBP16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Map3k20Q9ESL4 802 aaKnown RBP16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Igbp1bQ9QZ29 343 aa16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Krt85Q9Z2T6 507 aa16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Ktn1Q61595 1327 aaKnown RBP16.77■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Gm7356A0A087WSA6 508 aa16.77■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Gm43738A0A0G2JEA5 862 aa16.77■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Nme9A0A1L1SUL6 329 aa16.77■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Api5O35841 504 aaKnown RBP16.77■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Lnx1O70263 728 aa16.77■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Mrgprb1Q3UG61 350 aa16.77■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Usp28Q5I043 1051 aa16.77■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Cyp7b1Q60991 507 aa16.77■□□□□ 0.28
Ercc1-201ENSMUST00000003645 MyocdQ8VIM5 935 aa16.77■□□□□ 0.28
Ercc1-201ENSMUST00000003645 A0A0U1RNP2 1173 aa16.77■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Cyp26c1B2RXA7 518 aa16.77■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Celf5D3Z4T1 395 aaKnown RBP16.77■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Lig1P37913 916 aa16.77■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Xxylt1Q3U4G3 392 aa16.77■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Plekha7Q3UIL6 1118 aaKnown RBP16.77■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Usp17leQ7M764 540 aa16.77■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Hs2st1Q8R3H7 356 aa16.77■□□□□ 0.27
Ercc1-201ENSMUST00000003645 F11Q91Y47 624 aa16.77■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Col4a3bpQ9EQG9 624 aa16.77■□□□□ 0.27
Ercc1-201ENSMUST00000003645 GdaQ9R111 454 aa16.77■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Mtmr9Q9Z2D0 545 aa16.77■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Gadd45bP22339 160 aa16.76■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Morf4l1P60762 362 aa16.76■□□□□ 0.27
Ercc1-201ENSMUST00000003645 GclcP97494 637 aa16.76■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Eif3j2Q66JS6 263 aa16.76■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Znf618Q80YY7 953 aaKnown RBP16.76■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Kbtbd4Q8R179 534 aa16.76■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Usp26Q99MX1 835 aa16.76■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Fyb2A2A995 729 aa16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Zc3h7bF8VPP8 982 aaKnown RBP16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Rps6P62754 249 aaKnown RBP16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Btg1-ps1Q3V0S2 161 aa16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Btg1-ps2Q3V0X0 161 aa16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Nt5c2Q3V1L4 560 aa16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Gm10392Q3V3I3 114 aa16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Foxn1Q61575 648 aa16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Larp6Q8BN59 492 aa16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Acat1Q8QZT1 424 aa16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Snap47Q8R570 413 aa16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Ces1Q8VCC2 565 aa16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Ttc8Q8VD72 515 aa16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 AdpgkQ8VDL4 496 aa16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Q9DAQ4 598 aa16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Arpp21Q9DCB4 807 aa16.75■□□□□ 0.27
Ercc1-201ENSMUST00000003645 PhipQ8VDD9 1821 aaKnown RBP16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Ccdc112A0AUP1 442 aa16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Tbc1d2B1AVH7 922 aa16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Prpmp5E9PXN1 296 aa16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 PparaP23204 468 aa16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Stim2P83093 746 aa16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Sptlc2P97363 560 aaKnown RBP16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Nlrx1Q3TL44 975 aa16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Cnnm4Q69ZF7 771 aa16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Ssh1Q76I79 1042 aa16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Adam39Q7M762 756 aa16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Smc2Q8CG48 1191 aaKnown RBP16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Nod2Q8K3Z0 1020 aa16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Ppp2r5dQ91V89 594 aa16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Katnbl1Q9CWJ3 299 aa16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Nudt12Q9DCN1 462 aa16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Hic2Q9JLZ6 619 aaKnown RBP16.74■□□□□ 0.27
Ercc1-201ENSMUST00000003645 JcadQ5DTX6 1320 aa16.73■□□□□ 0.27
Ercc1-201ENSMUST00000003645 PfasQ5SUR0 1337 aa16.73■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Pramel3A2AHA7 463 aa16.73■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Gm7903A2AWL1 463 aa16.73■□□□□ 0.27
Ercc1-201ENSMUST00000003645 AV320801A2AWL3 467 aa16.73■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Gm15023L7MUB4 467 aa16.73■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Cyp2b10P12791 500 aa16.73■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Il6stQ00560 917 aa16.73■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Neurl1bQ0MW30 546 aa16.73■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Igf2bp2Q5SF07 592 aaKnown RBP16.73■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Tas2r124Q7M718 309 aa16.73■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Rtp1Q8C8C1 263 aa16.73■□□□□ 0.27
Ercc1-201ENSMUST00000003645 E4f1Q8CCE9 783 aa16.73■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Stk38Q91VJ4 465 aa16.73■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Elp3Q9CZX0 547 aa16.73■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Tanc1Q0VGY8 1856 aa16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Plcb2A3KGF7 1181 aa16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 OgdhlE9Q7L0 1029 aa16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Parp2O88554 559 aa16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Psg29Q3URN6 468 aa16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Madcam1Q61826 405 aa16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Lrrcc1Q69ZB0 1026 aa16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Krt87Q6IMF0 495 aa16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 IqcgQ80W32 419 aa16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Ubap2lQ80X50 1107 aaKnown RBP16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Adgra1Q8C4G9 578 aa16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Hexim1Q8R409 356 aaKnown RBP16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 RnpepQ8VCT3 650 aaKnown RBP16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Slc12a8Q8VI23 705 aa16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Trim11Q99PQ2 467 aa16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Ccer1Q9CQL2 403 aa16.72■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Wdr64Q9D565 1086 aa16.72■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms