RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W ALG8P40351 577 aa0.97□□□□□ -2.25
PRP39YML046W YIL067CP40514 678 aa0.97□□□□□ -2.25
PRP39YML046W YFR020WP43600 232 aa0.97□□□□□ -2.25
PRP39YML046W CRN1Q06440 651 aa0.97□□□□□ -2.25
PRP39YML046W MRPL35Q06678 367 aa0.97□□□□□ -2.25
PRP39YML046W CPR1P14832 162 aaKnown RBP0.97□□□□□ -2.25
PRP39YML046W RIT1P23796 513 aa0.97□□□□□ -2.25
PRP39YML046W NTR2P36118 322 aaPredicted RBP0.97□□□□□ -2.25
PRP39YML046W FPR3P38911 411 aaKnown RBP0.97□□□□□ -2.25
PRP39YML046W SHO1P40073 367 aa0.97□□□□□ -2.25
PRP39YML046W DIC1Q06143 298 aa0.97□□□□□ -2.25
PRP39YML046W SUL2Q12325 893 aa0.97□□□□□ -2.25
PRP39YML046W IRA1P18963 3092 aa0.96□□□□□ -2.26
PRP39YML046W ECM5Q03214 1411 aa0.96□□□□□ -2.26
PRP39YML046W YCF1P39109 1515 aaKnown RBP0.96□□□□□ -2.26
PRP39YML046W BIK1P11709 440 aa0.96□□□□□ -2.26
PRP39YML046W SPO16P17122 198 aa0.96□□□□□ -2.26
PRP39YML046W DRE2P36152 348 aa0.96□□□□□ -2.26
PRP39YML046W YBR071WP38243 211 aa0.96□□□□□ -2.26
PRP39YML046W TMA108P40462 946 aa0.96□□□□□ -2.26
PRP39YML046W FAF1P40546 346 aaPredicted RBP0.96□□□□□ -2.26
PRP39YML046W REE1P40893 198 aa0.96□□□□□ -2.26
PRP39YML046W RPN11P43588 306 aaKnown RBP0.96□□□□□ -2.26
PRP39YML046W RSM28Q03430 361 aa0.96□□□□□ -2.26
PRP39YML046W ADE13Q05911 482 aaKnown RBP0.96□□□□□ -2.26
PRP39YML046W IES4Q08561 116 aa0.96□□□□□ -2.26
PRP39YML046W RFM1Q12192 310 aa0.96□□□□□ -2.26
PRP39YML046W ARP7Q12406 477 aa0.96□□□□□ -2.26
PRP39YML046W DRS2P39524 1355 aa0.96□□□□□ -2.26
PRP39YML046W PAN1P32521 1480 aa0.96□□□□□ -2.26
PRP39YML046W SIR1P21691 654 aa0.95□□□□□ -2.26
PRP39YML046W RNA14P25298 677 aaKnown RBP0.95□□□□□ -2.26
PRP39YML046W YCR022CP25620 114 aa0.95□□□□□ -2.26
PRP39YML046W CDC60P26637 1090 aaKnown RBP0.95□□□□□ -2.26
PRP39YML046W TFC4P33339 1025 aa0.95□□□□□ -2.26
PRP39YML046W ARP1P38696 384 aa0.95□□□□□ -2.26
PRP39YML046W CNM67P53865 581 aaKnown RBP0.95□□□□□ -2.26
PRP39YML046W APL4Q12028 832 aa0.95□□□□□ -2.26
PRP39YML046W WTM1Q12363 437 aaKnown RBP0.95□□□□□ -2.26
PRP39YML046W ADE3P07245 946 aaKnown RBP0.95□□□□□ -2.26
PRP39YML046W MIS1P09440 975 aaKnown RBP0.95□□□□□ -2.26
PRP39YML046W LPD1P09624 499 aaKnown RBP0.95□□□□□ -2.26
PRP39YML046W LCB1P25045 558 aaKnown RBP0.95□□□□□ -2.26
PRP39YML046W ESL2P36168 1195 aa0.95□□□□□ -2.26
PRP39YML046W STT3P39007 718 aaKnown RBP0.95□□□□□ -2.26
PRP39YML046W YFL067WP43537 175 aa0.95□□□□□ -2.26
PRP39YML046W SMC3P47037 1230 aa0.95□□□□□ -2.26
PRP39YML046W MAD3P47074 515 aa0.95□□□□□ -2.26
PRP39YML046W IST1P53843 298 aaPredicted RBP0.95□□□□□ -2.26
PRP39YML046W CAT8P39113 1433 aa0.94□□□□□ -2.26
PRP39YML046W CCH1P50077 2039 aa0.94□□□□□ -2.26
PRP39YML046W PEP1P32319 1579 aa0.94□□□□□ -2.26
PRP39YML046W SNF3P10870 884 aa0.94□□□□□ -2.26
PRP39YML046W HSP26P15992 214 aaKnown RBP RIP-Chip data0.94□□□□□ -2.26not detected
PRP39YML046W SPE2P21182 396 aa0.94□□□□□ -2.26
PRP39YML046W CDC15P27636 974 aa0.94□□□□□ -2.26
PRP39YML046W ARP2P32381 391 aaKnown RBP0.94□□□□□ -2.26
PRP39YML046W CSM2P40465 213 aa0.94□□□□□ -2.26
PRP39YML046W RLI1Q03195 608 aaKnown RBP0.94□□□□□ -2.26
PRP39YML046W GLO2Q05584 274 aa0.94□□□□□ -2.26
PRP39YML046W YPR091CQ06833 770 aa0.94□□□□□ -2.26
PRP39YML046W IWR1Q07532 353 aaPredicted RBP0.94□□□□□ -2.26
PRP39YML046W CTF3Q12748 733 aa0.94□□□□□ -2.26
PRP39YML046W SGS1P35187 1447 aa0.94□□□□□ -2.26
PRP39YML046W ATP2P00830 511 aaKnown RBP0.93□□□□□ -2.26
PRP39YML046W HXK2P04807 486 aaKnown RBP0.93□□□□□ -2.26
PRP39YML046W PRB1P09232 635 aa0.93□□□□□ -2.26
PRP39YML046W MRP4P32902 394 aa0.93□□□□□ -2.26
PRP39YML046W TFC3P34111 1160 aa0.93□□□□□ -2.26
PRP39YML046W ROT2P38138 954 aa0.93□□□□□ -2.26
PRP39YML046W FSH1P38777 243 aaKnown RBP0.93□□□□□ -2.26
PRP39YML046W UBA4P38820 440 aa0.93□□□□□ -2.26
PRP39YML046W ERR3P42222 437 aa0.93□□□□□ -2.26
PRP39YML046W PEX14P53112 341 aa0.93□□□□□ -2.26
PRP39YML046W YMR160WQ03823 816 aa0.93□□□□□ -2.26
PRP39YML046W YKL050CP35736 922 aa0.92□□□□□ -2.26
PRP39YML046W SWP82P43554 623 aa0.92□□□□□ -2.26
PRP39YML046W CTF18P49956 741 aa0.92□□□□□ -2.26
PRP39YML046W HST1P53685 503 aa0.92□□□□□ -2.26
PRP39YML046W TMA17Q12513 150 aa0.92□□□□□ -2.26
PRP39YML046W POM152P39685 1337 aa0.92□□□□□ -2.26
PRP39YML046W SWI4P25302 1093 aaKnown RBP0.92□□□□□ -2.26
PRP39YML046W LAG1P38703 411 aa0.92□□□□□ -2.26
PRP39YML046W PKP1P40530 394 aa0.92□□□□□ -2.26
PRP39YML046W ESA1Q08649 445 aa0.92□□□□□ -2.26
PRP39YML046W APM3P38153 483 aa0.91□□□□□ -2.26
PRP39YML046W ASE1P50275 885 aa0.91□□□□□ -2.26
PRP39YML046W IMA1P53051 589 aa0.91□□□□□ -2.26
PRP39YML046W INN1P53901 409 aa0.91□□□□□ -2.26
PRP39YML046W COG6P53959 839 aa0.91□□□□□ -2.26
PRP39YML046W YDL009CQ12210 107 aa0.91□□□□□ -2.26
PRP39YML046W PRM7Q12459 698 aa0.91□□□□□ -2.26
PRP39YML046W AMD1P15274 810 aaKnown RBP0.9□□□□□ -2.26
PRP39YML046W HEM15P16622 393 aa0.9□□□□□ -2.26
PRP39YML046W UBP12P39538 1254 aa0.9□□□□□ -2.26
PRP39YML046W YJR120WP47157 116 aa0.9□□□□□ -2.26
PRP39YML046W SDH5Q08230 162 aa0.9□□□□□ -2.26
PRP39YML046W RRP6Q12149 733 aaKnown RBP0.9□□□□□ -2.26
PRP39YML046W ACC1Q00955 2233 aaKnown RBP0.9□□□□□ -2.26
PRP39YML046W ARG81P05085 880 aa0.9□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 91.4 ms