RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 PTF1AQ7RTS3 328 aa16.37■□□□□ 0.21
SCARB2-221ENST00000640341 CCDC51Q96ER9 411 aa16.37■□□□□ 0.21
SCARB2-221ENST00000640341 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCARB2-221ENST00000640341 COL4A1P02462 1669 aa16.37■□□□□ 0.21
SCARB2-221ENST00000640341 ZNF185O15231 689 aa16.37■□□□□ 0.21
SCARB2-221ENST00000640341 LONP1P36776 959 aaKnown RBP16.37■□□□□ 0.21
SCARB2-221ENST00000640341 ATP2B2Q01814 1243 aa16.37■□□□□ 0.21
SCARB2-221ENST00000640341 NAALADL2Q58DX5 795 aa16.37■□□□□ 0.21
SCARB2-221ENST00000640341 CCDC148Q8NFR7 591 aa16.37■□□□□ 0.21
SCARB2-221ENST00000640341 SETDB2Q96T68 719 aa16.37■□□□□ 0.21
SCARB2-221ENST00000640341 TUBGCP2Q9BSJ2 902 aa16.37■□□□□ 0.21
SCARB2-221ENST00000640341 REXO2Q9Y3B8 237 aaKnown RBP16.37■□□□□ 0.21
SCARB2-221ENST00000640341 TAF1P21675 1872 aa16.37■□□□□ 0.21
SCARB2-221ENST00000640341 SEMA3EO15041 775 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 RAD21O60216 631 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 PLCG1P19174 1290 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 EIF6P56537 245 aaKnown RBP16.36■□□□□ 0.21
SCARB2-221ENST00000640341 USP17L2Q6R6M4 530 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 DYMQ7RTS9 669 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 PLEKHA4Q9H4M7 779 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 SLC39A2Q9NP94 309 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 TCP11L1Q9NUJ3 509 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 ZNHIT6Q9NWK9 470 aaKnown RBP16.36■□□□□ 0.21
SCARB2-221ENST00000640341 ARPP21Q9UBL0 812 aaPredicted RBP16.36■□□□□ 0.21
SCARB2-221ENST00000640341 SHANK3Q9BYB0 1731 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 H7C1D1 291 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 IDEP14735 1019 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 CASP8Q14790 479 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 KRT26Q7Z3Y9 468 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 TXLNBQ8N3L3 684 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 SMCR8Q8TEV9 937 aaPredicted RBP16.36■□□□□ 0.21
SCARB2-221ENST00000640341 UBA5Q9GZZ9 404 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 ATP8A2Q9NTI2 1148 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 ATP8B1O43520 1251 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 TXKP42681 527 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 GRIK5Q16478 980 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 TXNRD1Q16881 649 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 ADSSL1Q8N142 457 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 LINC00116Q8NCU8 138 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 MMS19Q96T76 1030 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 TRIM34Q9BYJ4 488 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 FAM207AQ9NSI2 230 aaPredicted RBP16.36■□□□□ 0.21
SCARB2-221ENST00000640341 EXOC1Q9NV70 894 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 PCDHA6Q9UN73 950 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 PCDHA8Q9Y5H6 950 aa16.36■□□□□ 0.21
SCARB2-221ENST00000640341 CHD4Q14839 1912 aa16.35■□□□□ 0.21
SCARB2-221ENST00000640341 CYTH3O43739 400 aa16.35■□□□□ 0.21
SCARB2-221ENST00000640341 EIF3JO75822 258 aaKnown RBP16.35■□□□□ 0.21
SCARB2-221ENST00000640341 TRAPPC10P48553 1259 aa16.35■□□□□ 0.21
SCARB2-221ENST00000640341 STK4Q13043 487 aa16.35■□□□□ 0.21
SCARB2-221ENST00000640341 AMOTL1Q8IY63 956 aa16.35■□□□□ 0.21
SCARB2-221ENST00000640341 BIN2Q9UBW5 565 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-221ENST00000640341 LDHBP07195 334 aaKnown RBP16.35■□□□□ 0.21
SCARB2-221ENST00000640341 ENOX2Q16206 610 aaKnown RBP16.35■□□□□ 0.21
SCARB2-221ENST00000640341 CABP7Q86V35 215 aa16.35■□□□□ 0.21
SCARB2-221ENST00000640341 JAKMIP2Q96AA8 810 aa16.35■□□□□ 0.21
SCARB2-221ENST00000640341 NOC4LQ9BVI4 516 aaKnown RBP16.35■□□□□ 0.21
SCARB2-221ENST00000640341 LACRTQ9GZZ8 138 aa16.35■□□□□ 0.21
SCARB2-221ENST00000640341 DDX60Q8IY21 1712 aaKnown RBP16.35■□□□□ 0.21
SCARB2-221ENST00000640341 KLRF2D3W0D1 207 aa16.35■□□□□ 0.21
SCARB2-221ENST00000640341 ORC4O43929 436 aa16.35■□□□□ 0.21
SCARB2-221ENST00000640341 CCDC96Q2M329 555 aa16.35■□□□□ 0.21
SCARB2-221ENST00000640341 FBXO33Q7Z6M2 555 aa16.35■□□□□ 0.21
SCARB2-221ENST00000640341 ANKRD13CQ8N6S4 541 aa16.35■□□□□ 0.21
SCARB2-221ENST00000640341 LRRC15Q8TF66 581 aa16.35■□□□□ 0.21
SCARB2-221ENST00000640341 RIN2Q8WYP3 895 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-221ENST00000640341 ITIH6Q6UXX5 1313 aa16.35■□□□□ 0.21
SCARB2-221ENST00000640341 MYH6P13533 1939 aa16.34■□□□□ 0.21
SCARB2-221ENST00000640341 ANKRD65E5RJM6 399 aa16.34■□□□□ 0.21
SCARB2-221ENST00000640341 IRX5P78411 483 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-221ENST00000640341 FAM98CQ17RN3 349 aaKnown RBP16.34■□□□□ 0.21
SCARB2-221ENST00000640341 MYH8P13535 1937 aa16.34■□□□□ 0.21
SCARB2-221ENST00000640341 LRRC10BA6NIK2 292 aa16.34■□□□□ 0.21
SCARB2-221ENST00000640341 LGALS16A8MUM7 142 aa16.34■□□□□ 0.21
SCARB2-221ENST00000640341 GNPATO15228 680 aa16.34■□□□□ 0.21
SCARB2-221ENST00000640341 PLEKP08567 350 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-221ENST00000640341 CT47A1Q5JQC4 288 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-221ENST00000640341 C4orf32Q8N8J7 132 aa16.34■□□□□ 0.21
SCARB2-221ENST00000640341 CNOT6LQ96LI5 555 aaKnown RBP16.34■□□□□ 0.21
SCARB2-221ENST00000640341 SAR1BQ9Y6B6 198 aa16.34■□□□□ 0.21
SCARB2-221ENST00000640341 ITGB4P16144 1822 aa16.34■□□□□ 0.21
SCARB2-221ENST00000640341 RCCD1A6NED2 376 aa16.33■□□□□ 0.21
SCARB2-221ENST00000640341 LRRIQ3A6PVS8 624 aaPredicted RBP16.33■□□□□ 0.21
SCARB2-221ENST00000640341 ZPR1O75312 459 aa16.33■□□□□ 0.21
SCARB2-221ENST00000640341 NAP1L1P55209 391 aaKnown RBP16.33■□□□□ 0.21
SCARB2-221ENST00000640341 WHAMMP3Q1A5X7 153 aa16.33■□□□□ 0.21
SCARB2-221ENST00000640341 ANKRD40Q6AI12 368 aa16.33■□□□□ 0.21
SCARB2-221ENST00000640341 PYM1Q9BRP8 204 aaKnown RBP16.33■□□□□ 0.21
SCARB2-221ENST00000640341 TANGO6Q9C0B7 1094 aa16.33■□□□□ 0.21
SCARB2-221ENST00000640341 DEF6Q9H4E7 631 aa16.33■□□□□ 0.21
SCARB2-221ENST00000640341 RABEP2Q9H5N1 569 aa16.33■□□□□ 0.21
SCARB2-221ENST00000640341 MMRN2Q9H8L6 949 aa16.33■□□□□ 0.21
SCARB2-221ENST00000640341 L1RE1Q9UN81 338 aa16.33■□□□□ 0.21
SCARB2-221ENST00000640341 VGLL3A8MV65 326 aa16.33■□□□□ 0.2
SCARB2-221ENST00000640341 SSBP05455 408 aaKnown RBP eCLIP16.33■□□□□ 0.2
SCARB2-221ENST00000640341 CXCR5P32302 372 aa16.33■□□□□ 0.2
SCARB2-221ENST00000640341 HERVK_113P62684 666 aa16.33■□□□□ 0.2
SCARB2-221ENST00000640341 RAD51AP2Q09MP3 1159 aa16.33■□□□□ 0.2
SCARB2-221ENST00000640341 TRIM14Q14142 442 aa16.33■□□□□ 0.2
SCARB2-221ENST00000640341 SF3B3Q15393 1217 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms