RNA–Protein interactions for RNA: ENST00000640311.1

KCNMA1-280, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 3

Gene KCNMA1, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-280ENST00000640311 HOXC6P09630 235 aa11.81□□□□□ -0.52
KCNMA1-280ENST00000640311 ALAS1P13196 640 aa11.81□□□□□ -0.52
KCNMA1-280ENST00000640311 CNGA1P29973 690 aa11.81□□□□□ -0.52
KCNMA1-280ENST00000640311 CYP2C19P33261 490 aa11.81□□□□□ -0.52
KCNMA1-280ENST00000640311 ZNF543Q08ER8 600 aa11.81□□□□□ -0.52
KCNMA1-280ENST00000640311 SYDE2Q5VT97 1194 aa11.81□□□□□ -0.52
KCNMA1-280ENST00000640311 RNF20Q5VTR2 975 aa11.81□□□□□ -0.52
KCNMA1-280ENST00000640311 STOX1Q6ZVD7 989 aa11.81□□□□□ -0.52
KCNMA1-280ENST00000640311 PAK6Q9NQU5 681 aaPredicted RBP11.81□□□□□ -0.52
KCNMA1-280ENST00000640311 FBXO40Q9UH90 709 aa11.81□□□□□ -0.52
KCNMA1-280ENST00000640311 CCPG1Q9ULG6 757 aa11.81□□□□□ -0.52
KCNMA1-280ENST00000640311 SLC27A2O14975 620 aa11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 DHX16O60231 1041 aaKnown RBP11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 PARP1P09874 1014 aaKnown RBP11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 CCND3P30281 292 aaPredicted RBP11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 FXR2P51116 673 aaKnown RBP eCLIP11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 WTAPQ15007 396 aa11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 TMEM67Q5HYA8 995 aa11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 CREB3L3Q68CJ9 461 aa11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 BTNL9Q6UXG8 535 aa11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 CHST13Q8NET6 341 aa11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 ANKS1AQ92625 1134 aa11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 MAML3Q96JK9 1138 aa11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 TRERF1Q96PN7 1200 aa11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 UBA5Q9GZZ9 404 aa11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 ACAD9Q9H845 621 aa11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 RNF146Q9NTX7 359 aa11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 PLXNB2O15031 1838 aa11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 PARP14Q460N5 1801 aa11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 HTTP42858 3142 aa11.8□□□□□ -0.52
KCNMA1-280ENST00000640311 COL11A1P12107 1806 aaPredicted RBP11.79□□□□□ -0.52
KCNMA1-280ENST00000640311 ICAM1P05362 532 aa11.79□□□□□ -0.52
KCNMA1-280ENST00000640311 SNHG28P0DPA3 235 aa11.79□□□□□ -0.52
KCNMA1-280ENST00000640311 NECTIN1Q15223 517 aa11.79□□□□□ -0.52
KCNMA1-280ENST00000640311 SEC23AQ15436 765 aa11.79□□□□□ -0.52
KCNMA1-280ENST00000640311 ASPRV1Q53RT3 343 aa11.79□□□□□ -0.52
KCNMA1-280ENST00000640311 MAP3K21Q5TCX8 1036 aa11.79□□□□□ -0.52
KCNMA1-280ENST00000640311 OLFML2BQ68BL8 750 aa11.79□□□□□ -0.52
KCNMA1-280ENST00000640311 RANBP17Q9H2T7 1088 aaKnown RBP11.79□□□□□ -0.52
KCNMA1-280ENST00000640311 CPVLQ9H3G5 476 aa11.79□□□□□ -0.52
KCNMA1-280ENST00000640311 ZNF536O15090 1300 aa11.79□□□□□ -0.52
KCNMA1-280ENST00000640311 PRC1O43663 620 aa11.78□□□□□ -0.52
KCNMA1-280ENST00000640311 MCM5P33992 734 aa11.78□□□□□ -0.52
KCNMA1-280ENST00000640311 ZNF792Q3KQV3 632 aa11.78□□□□□ -0.52
KCNMA1-280ENST00000640311 TKFCQ3LXA3 575 aa11.78□□□□□ -0.52
KCNMA1-280ENST00000640311 NFXL1Q6ZNB6 911 aa11.78□□□□□ -0.52
KCNMA1-280ENST00000640311 SHISA4Q96DD7 197 aa11.78□□□□□ -0.52
KCNMA1-280ENST00000640311 VAT1LQ9HCJ6 419 aa11.78□□□□□ -0.52
KCNMA1-280ENST00000640311 DIS3Q9Y2L1 958 aaKnown RBP11.78□□□□□ -0.52
KCNMA1-280ENST00000640311 DOCK3Q8IZD9 2030 aa11.77□□□□□ -0.52
KCNMA1-280ENST00000640311 CENPFP49454 3210 aa11.77□□□□□ -0.52
KCNMA1-280ENST00000640311 FARP2O94887 1054 aaPredicted RBP11.77□□□□□ -0.53
KCNMA1-280ENST00000640311 TAL1P17542 331 aaPredicted RBP11.77□□□□□ -0.53
KCNMA1-280ENST00000640311 USH1GQ495M9 461 aa11.77□□□□□ -0.53
KCNMA1-280ENST00000640311 MUM1L1Q5H9M0 696 aa11.77□□□□□ -0.53
KCNMA1-280ENST00000640311 PRAMEF19Q5SWL8 479 aa11.77□□□□□ -0.53
KCNMA1-280ENST00000640311 NSMFQ6X4W1 530 aa11.77□□□□□ -0.53
KCNMA1-280ENST00000640311 CATIPQ7Z7H3 387 aa11.77□□□□□ -0.53
KCNMA1-280ENST00000640311 MB21D2Q8IYB1 491 aaPredicted RBP11.77□□□□□ -0.53
KCNMA1-280ENST00000640311 ADGRF4Q8IZF3 695 aa11.77□□□□□ -0.53
KCNMA1-280ENST00000640311 TINF2Q9BSI4 451 aa11.77□□□□□ -0.53
KCNMA1-280ENST00000640311 SENP2Q9HC62 589 aa11.77□□□□□ -0.53
KCNMA1-280ENST00000640311 CNPY2Q9Y2B0 182 aa11.77□□□□□ -0.53
KCNMA1-280ENST00000640311 RBBP6Q7Z6E9 1792 aaKnown RBP11.77□□□□□ -0.53
KCNMA1-280ENST00000640311 ZNF236Q9UL36 1845 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 CCDC69A6NI79 296 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 KLRF2D3W0D1 207 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 POTEB2H3BUK9 544 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 MSCO60682 206 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 REC8O95072 547 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 CYBAP13498 195 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 CAPN2P17655 700 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 ANTXR2P58335 489 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 CDC37Q16543 378 aaPredicted RBP11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 STAG2Q8N3U4 1231 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 IGDCC4Q8TDY8 1250 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 NUP133Q8WUM0 1156 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 NEK1Q96PY6 1258 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 CRISPLD2Q9H0B8 497 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 A1CFQ9NQ94 594 aaKnown RBP11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 DDX20Q9UHI6 824 aaKnown RBP11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 PNMA2Q9UL42 364 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 PFASO15067 1338 aa11.76□□□□□ -0.53
KCNMA1-280ENST00000640311 DNAJC25-GNG10A0A024R161 153 aa11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 PTPDC1A2A3K4 754 aa11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 CNTN2Q02246 1040 aa11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 KRT32Q14532 448 aa11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 ANO1Q5XXA6 986 aa11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 LHX8Q68G74 356 aa11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 TMTC2Q8N394 836 aa11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 MSL3Q8N5Y2 521 aaKnown RBP11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 TRPV1Q8NER1 839 aa11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 CTCFLQ8NI51 663 aaPredicted RBP11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 DPF3Q92784 378 aa11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 PAWRQ96IZ0 340 aaKnown RBP11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 TMEM87BQ96K49 555 aa11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 LRRC2Q9BYS8 371 aa11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 LY9Q9HBG7 655 aa11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
KCNMA1-280ENST00000640311 MAD2L2Q9UI95 211 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms