RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 ABCB6Q9NP58 842 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 CAPN11Q9UMQ6 739 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 BAZ2BQ9UIF8 2168 aaKnown RBP16.35■□□□□ 0.21
CLN6-215ENST00000636674 FAM205AQ6ZU69 1335 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 RGL2O15211 777 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 NMT2O60551 498 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 RHOBTB3O94955 611 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 MECOMQ03112 1051 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 MEA1Q16626 185 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 GALNT17Q6IS24 598 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 CCSER1Q9C0I3 900 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 MAGEF1Q9HAY2 307 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 PDE11AQ9HCR9 933 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 TTC26A0AVF1 554 aa16.34■□□□□ 0.21
CLN6-215ENST00000636674 LAD1O00515 517 aa16.34■□□□□ 0.21
CLN6-215ENST00000636674 ADAMTS3O15072 1205 aa16.34■□□□□ 0.21
CLN6-215ENST00000636674 KLRC4O43908 158 aa16.34■□□□□ 0.21
CLN6-215ENST00000636674 COBLO75128 1261 aa16.34■□□□□ 0.21
CLN6-215ENST00000636674 CHP1Q99653 195 aa16.34■□□□□ 0.21
CLN6-215ENST00000636674 TRIM37O94972 964 aa16.33■□□□□ 0.21
CLN6-215ENST00000636674 VEGFAP15692 232 aaPredicted RBP16.33■□□□□ 0.21
CLN6-215ENST00000636674 PRPHP41219 470 aa16.33■□□□□ 0.21
CLN6-215ENST00000636674 BAG6P46379 1132 aa16.33■□□□□ 0.21
CLN6-215ENST00000636674 STIM1Q13586 685 aa16.33■□□□□ 0.21
CLN6-215ENST00000636674 DGKHQ86XP1 1220 aa16.33■□□□□ 0.21
CLN6-215ENST00000636674 GIMAP8Q8ND71 665 aaPredicted RBP16.33■□□□□ 0.21
CLN6-215ENST00000636674 EHBP1Q8NDI1 1231 aa16.33■□□□□ 0.21
CLN6-215ENST00000636674 GOLGA5Q8TBA6 731 aa16.33■□□□□ 0.21
CLN6-215ENST00000636674 CUEDC2Q9H467 287 aa16.33■□□□□ 0.21
CLN6-215ENST00000636674 KBTBD4Q9NVX7 518 aa16.33■□□□□ 0.21
CLN6-215ENST00000636674 LUC7L2Q9Y383 392 aaKnown RBP16.33■□□□□ 0.21
CLN6-215ENST00000636674 COL24A1Q17RW2 1714 aa16.33■□□□□ 0.2
CLN6-215ENST00000636674 ROBO3Q96MS0 1386 aa16.33■□□□□ 0.2
CLN6-215ENST00000636674 NHSQ6T4R5 1651 aa16.33■□□□□ 0.2
CLN6-215ENST00000636674 RGPD3A6NKT7 1758 aaPredicted RBP16.33■□□□□ 0.2
CLN6-215ENST00000636674 RGPD4Q7Z3J3 1758 aa16.33■□□□□ 0.2
CLN6-215ENST00000636674 DNM2P50570 870 aa16.33■□□□□ 0.2
CLN6-215ENST00000636674 CASP8Q14790 479 aa16.33■□□□□ 0.2
CLN6-215ENST00000636674 FAM47AQ5JRC9 791 aa16.33■□□□□ 0.2
CLN6-215ENST00000636674 PAPD7Q5XG87 772 aaKnown RBP16.33■□□□□ 0.2
CLN6-215ENST00000636674 DTHD1Q6ZMT9 781 aa16.33■□□□□ 0.2
CLN6-215ENST00000636674 C3orf67Q6ZVT6 689 aa16.33■□□□□ 0.2
CLN6-215ENST00000636674 DEFB132Q7Z7B7 95 aa16.33■□□□□ 0.2
CLN6-215ENST00000636674 RETREG2Q8NC44 543 aa16.33■□□□□ 0.2
CLN6-215ENST00000636674 CCDC148Q8NFR7 591 aa16.33■□□□□ 0.2
CLN6-215ENST00000636674 RPGRIP1Q96KN7 1286 aa16.33■□□□□ 0.2
CLN6-215ENST00000636674 TTYH3Q9C0H2 523 aa16.33■□□□□ 0.2
CLN6-215ENST00000636674 VIPAS39Q9H9C1 493 aa16.33■□□□□ 0.2
CLN6-215ENST00000636674 WTIPA6NIX2 430 aaPredicted RBP16.32■□□□□ 0.2
CLN6-215ENST00000636674 TSPY2A6NKD2 308 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 PSMA7O14818 248 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 RHOXF2BP0C7M4 288 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 SRGNP10124 158 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 GNAQP50148 359 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 HERVK_113P62684 666 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 EVX2Q03828 476 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 SLC20A2Q08357 652 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 MCM6Q14566 821 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 GRM4Q14833 912 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 ZSCAN26Q16670 478 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 ERFEQ4G0M1 354 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 TTI2Q6NXR4 508 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 WDR59Q6PJI9 974 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 NOA1Q8NC60 698 aaKnown RBP16.32■□□□□ 0.2
CLN6-215ENST00000636674 FAM71BQ8TC56 605 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 RHOXF2Q9BQY4 288 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 TSPYL1Q9H0U9 437 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 ACBD3Q9H3P7 528 aa16.32■□□□□ 0.2
CLN6-215ENST00000636674 TRIM49BA6NDI0 452 aa16.31■□□□□ 0.2
CLN6-215ENST00000636674 TFRCP02786 760 aaKnown RBP16.31■□□□□ 0.2
CLN6-215ENST00000636674 MCM3P25205 808 aa16.31■□□□□ 0.2
CLN6-215ENST00000636674 PMS1P54277 932 aaKnown RBP16.31■□□□□ 0.2
CLN6-215ENST00000636674 KRT83P78385 493 aa16.31■□□□□ 0.2
CLN6-215ENST00000636674 IRX5P78411 483 aaPredicted RBP16.31■□□□□ 0.2
CLN6-215ENST00000636674 SLC10A5Q5PT55 438 aa16.31■□□□□ 0.2
CLN6-215ENST00000636674 DHTKD1Q96HY7 919 aaPredicted RBP16.31■□□□□ 0.2
CLN6-215ENST00000636674 NUP58Q9BVL2 599 aa16.31■□□□□ 0.2
CLN6-215ENST00000636674 KAT14Q9H8E8 782 aa16.31■□□□□ 0.2
CLN6-215ENST00000636674 MED4Q9NPJ6 270 aa16.31■□□□□ 0.2
CLN6-215ENST00000636674 NAV1Q8NEY1 1877 aa16.31■□□□□ 0.2
CLN6-215ENST00000636674 RPS6KA5O75582 802 aa16.31■□□□□ 0.2
CLN6-215ENST00000636674 PPP1R2P41236 205 aa16.31■□□□□ 0.2
CLN6-215ENST00000636674 USP14P54578 494 aa16.31■□□□□ 0.2
CLN6-215ENST00000636674 RAD51AP2Q09MP3 1159 aa16.31■□□□□ 0.2
CLN6-215ENST00000636674 CCDC178Q5BJE1 867 aa16.31■□□□□ 0.2
CLN6-215ENST00000636674 CWC15Q9P013 229 aaKnown RBP16.31■□□□□ 0.2
CLN6-215ENST00000636674 CCDC194A0A1B0GVG4 234 aa16.3■□□□□ 0.2
CLN6-215ENST00000636674 TARSL2A2RTX5 802 aaKnown RBP16.3■□□□□ 0.2
CLN6-215ENST00000636674 CYP2D6P10635 497 aa16.3■□□□□ 0.2
CLN6-215ENST00000636674 ACTN2P35609 894 aa16.3■□□□□ 0.2
CLN6-215ENST00000636674 TSR1Q2NL82 804 aaKnown RBP16.3■□□□□ 0.2
CLN6-215ENST00000636674 FIGNQ5HY92 759 aa16.3■□□□□ 0.2
CLN6-215ENST00000636674 NCAPH2Q6IBW4 605 aa16.3■□□□□ 0.2
CLN6-215ENST00000636674 TRIM47Q96LD4 638 aa16.3■□□□□ 0.2
CLN6-215ENST00000636674 AK8Q96MA6 479 aa16.3■□□□□ 0.2
CLN6-215ENST00000636674 MAGEC2Q9UBF1 373 aaPredicted RBP16.3■□□□□ 0.2
CLN6-215ENST00000636674 PCDHA6Q9UN73 950 aa16.3■□□□□ 0.2
CLN6-215ENST00000636674 MAPK8IP1Q9UQF2 711 aa16.3■□□□□ 0.2
CLN6-215ENST00000636674 PCDHA8Q9Y5H6 950 aa16.3■□□□□ 0.2
CLN6-215ENST00000636674 ANO9A1A5B4 782 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms