RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 TMEM47Q9BQJ4 181 aa22.32■■□□□ 1.16
CLN6-213ENST00000636212 DSCC1Q9BVC3 393 aa22.32■■□□□ 1.16
CLN6-213ENST00000636212 RNF146Q9NTX7 359 aa22.32■■□□□ 1.16
CLN6-213ENST00000636212 PCDH10Q9P2E7 1040 aa22.32■■□□□ 1.16
CLN6-213ENST00000636212 PRKAG2Q9UGJ0 569 aa22.32■■□□□ 1.16
CLN6-213ENST00000636212 PRR12Q9ULL5 1215 aa22.32■■□□□ 1.16
CLN6-213ENST00000636212 ALAS1P13196 640 aa22.31■■□□□ 1.16
CLN6-213ENST00000636212 ATN1P54259 1190 aaPredicted RBP22.31■■□□□ 1.16
CLN6-213ENST00000636212 IMMTQ16891 758 aaKnown RBP22.31■■□□□ 1.16
CLN6-213ENST00000636212 CCDC174Q6PII3 467 aa22.31■■□□□ 1.16
CLN6-213ENST00000636212 MAMDC4Q6UXC1 1216 aa22.31■■□□□ 1.16
CLN6-213ENST00000636212 IQCA1Q86XH1 822 aa22.31■■□□□ 1.16
CLN6-213ENST00000636212 AGBL1Q96MI9 1066 aa22.31■■□□□ 1.16
CLN6-213ENST00000636212 TRERF1Q96PN7 1200 aa22.31■■□□□ 1.16
CLN6-213ENST00000636212 ZHX1Q9UKY1 873 aaPredicted RBP22.31■■□□□ 1.16
CLN6-213ENST00000636212 FAM184BQ9ULE4 1060 aa22.31■■□□□ 1.16
CLN6-213ENST00000636212 POTEB2H3BUK9 544 aa22.3■■□□□ 1.16
CLN6-213ENST00000636212 LRRC41Q15345 812 aa22.3■■□□□ 1.16
CLN6-213ENST00000636212 TTC22Q5TAA0 569 aa22.3■■□□□ 1.16
CLN6-213ENST00000636212 TBC1D10CQ8IV04 446 aa22.3■■□□□ 1.16
CLN6-213ENST00000636212 RUFY2Q8WXA3 655 aa22.3■■□□□ 1.16
CLN6-213ENST00000636212 PRO3102Q9H379 93 aa22.3■■□□□ 1.16
CLN6-213ENST00000636212 ZNF865P0CJ78 1059 aaPredicted RBP22.29■■□□□ 1.16
CLN6-213ENST00000636212 TAL1P17542 331 aaPredicted RBP22.29■■□□□ 1.16
CLN6-213ENST00000636212 BMP8BP34820 402 aa22.29■■□□□ 1.16
CLN6-213ENST00000636212 GDF15Q99988 308 aa22.29■■□□□ 1.16
CLN6-213ENST00000636212 ABHD16BQ9H3Z7 469 aa22.29■■□□□ 1.16
CLN6-213ENST00000636212 PNMA2Q9UL42 364 aa22.29■■□□□ 1.16
CLN6-213ENST00000636212 CCPG1Q9ULG6 757 aa22.29■■□□□ 1.16
CLN6-213ENST00000636212 ADCYAP1R1P41586 468 aa22.28■■□□□ 1.16
CLN6-213ENST00000636212 RTP1P59025 263 aa22.28■■□□□ 1.16
CLN6-213ENST00000636212 SYDE2Q5VT97 1194 aa22.28■■□□□ 1.16
CLN6-213ENST00000636212 GPCPD1Q9NPB8 672 aa22.28■■□□□ 1.16
CLN6-213ENST00000636212 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.28■■□□□ 1.16
CLN6-213ENST00000636212 ATP11BQ9Y2G3 1177 aa22.28■■□□□ 1.16
CLN6-213ENST00000636212 ZNF536O15090 1300 aa22.28■■□□□ 1.16
CLN6-213ENST00000636212 FRMPD2Q68DX3 1309 aaPredicted RBP22.28■■□□□ 1.16
CLN6-213ENST00000636212 CEP290O15078 2479 aa22.28■■□□□ 1.16
CLN6-213ENST00000636212 ASB14A6NK59 587 aa22.27■■□□□ 1.16
CLN6-213ENST00000636212 SNAI1O95863 264 aaPredicted RBP22.27■■□□□ 1.16
CLN6-213ENST00000636212 ICAM1P05362 532 aa22.27■■□□□ 1.16
CLN6-213ENST00000636212 PDE4AP27815 886 aa22.27■■□□□ 1.16
CLN6-213ENST00000636212 MAGEA10P43363 369 aaPredicted RBP22.27■■□□□ 1.16
CLN6-213ENST00000636212 SNAP25P60880 206 aa22.27■■□□□ 1.16
CLN6-213ENST00000636212 ACVR2BQ13705 512 aa22.27■■□□□ 1.16
CLN6-213ENST00000636212 BTNL9Q6UXG8 535 aa22.27■■□□□ 1.16
CLN6-213ENST00000636212 SLC39A5Q6ZMH5 540 aa22.27■■□□□ 1.16
CLN6-213ENST00000636212 ARMCX2Q7L311 632 aa22.27■■□□□ 1.16
CLN6-213ENST00000636212 DGKHQ86XP1 1220 aa22.27■■□□□ 1.16
CLN6-213ENST00000636212 LBHD1Q9BQE6 289 aaPredicted RBP22.27■■□□□ 1.16
CLN6-213ENST00000636212 KRT23Q9C075 422 aa22.27■■□□□ 1.16
CLN6-213ENST00000636212 UBE2OQ9C0C9 1292 aaKnown RBP22.27■■□□□ 1.16
CLN6-213ENST00000636212 CNNM2Q9H8M5 875 aa22.27■■□□□ 1.16
CLN6-213ENST00000636212 SPC25Q9HBM1 224 aa22.27■■□□□ 1.16
CLN6-213ENST00000636212 NEDD4P46934 1319 aa22.27■■□□□ 1.16
CLN6-213ENST00000636212 RAD50Q92878 1312 aa22.27■■□□□ 1.16
CLN6-213ENST00000636212 KDM4AO75164 1064 aa22.26■■□□□ 1.15
CLN6-213ENST00000636212 PGK1P00558 417 aa22.26■■□□□ 1.15
CLN6-213ENST00000636212 PDHBP11177 359 aa22.26■■□□□ 1.15
CLN6-213ENST00000636212 SLC16A2P36021 539 aa22.26■■□□□ 1.15
CLN6-213ENST00000636212 TTBK2Q6IQ55 1244 aa22.26■■□□□ 1.15
CLN6-213ENST00000636212 RASGRP2Q7LDG7 609 aa22.26■■□□□ 1.15
CLN6-213ENST00000636212 FERMT2Q96AC1 680 aa22.26■■□□□ 1.15
CLN6-213ENST00000636212 ZKSCAN3Q9BRR0 538 aa22.26■■□□□ 1.15
CLN6-213ENST00000636212 RANBP17Q9H2T7 1088 aaKnown RBP22.26■■□□□ 1.15
CLN6-213ENST00000636212 KAT14Q9H8E8 782 aa22.26■■□□□ 1.15
CLN6-213ENST00000636212 A1CFQ9NQ94 594 aaKnown RBP22.26■■□□□ 1.15
CLN6-213ENST00000636212 GPATCH4Q5T3I0 446 aaKnown RBP22.25■■□□□ 1.15
CLN6-213ENST00000636212 NSMFQ6X4W1 530 aa22.25■■□□□ 1.15
CLN6-213ENST00000636212 CCDC144CPQ8IYA2 1237 aa22.25■■□□□ 1.15
CLN6-213ENST00000636212 PHF24Q9UPV7 400 aa22.25■■□□□ 1.15
CLN6-213ENST00000636212 LAMA4Q16363 1823 aa22.24■■□□□ 1.15
CLN6-213ENST00000636212 DUSP11O75319 330 aaKnown RBP22.24■■□□□ 1.15
CLN6-213ENST00000636212 GSPT1P15170 499 aaKnown RBP22.24■■□□□ 1.15
CLN6-213ENST00000636212 CNTN2Q02246 1040 aa22.24■■□□□ 1.15
CLN6-213ENST00000636212 ZNF543Q08ER8 600 aa22.24■■□□□ 1.15
CLN6-213ENST00000636212 FAM133AQ8N9E0 248 aa22.24■■□□□ 1.15
CLN6-213ENST00000636212 TSEN34Q9BSV6 310 aaKnown RBP22.24■■□□□ 1.15
CLN6-213ENST00000636212 B4E1Z4 1266 aa22.23■■□□□ 1.15
CLN6-213ENST00000636212 NUP133Q8WUM0 1156 aa22.23■■□□□ 1.15
CLN6-213ENST00000636212 ZSCAN10Q96SZ4 725 aaPredicted RBP22.23■■□□□ 1.15
CLN6-213ENST00000636212 UBAC1Q9BSL1 405 aa22.23■■□□□ 1.15
CLN6-213ENST00000636212 MDM2Q00987 491 aaPredicted RBP22.22■■□□□ 1.15
CLN6-213ENST00000636212 TRDNQ13061 729 aa22.22■■□□□ 1.15
CLN6-213ENST00000636212 CCDC144BQ3MJ40 725 aa22.22■■□□□ 1.15
CLN6-213ENST00000636212 MUM1L1Q5H9M0 696 aa22.22■■□□□ 1.15
CLN6-213ENST00000636212 C1orf53Q5VUE5 145 aa22.22■■□□□ 1.15
CLN6-213ENST00000636212 TDHQ8IZJ6 230 aa22.22■■□□□ 1.15
CLN6-213ENST00000636212 PCSK9Q8NBP7 692 aaKnown RBP22.22■■□□□ 1.15
CLN6-213ENST00000636212 PNMA1Q8ND90 353 aa22.22■■□□□ 1.15
CLN6-213ENST00000636212 FGD4Q96M96 766 aa22.22■■□□□ 1.15
CLN6-213ENST00000636212 CYP39A1Q9NYL5 469 aa22.22■■□□□ 1.15
CLN6-213ENST00000636212 ADD3Q9UEY8 706 aaKnown RBP22.22■■□□□ 1.15
CLN6-213ENST00000636212 SYNRGQ9UMZ2 1314 aa22.22■■□□□ 1.15
CLN6-213ENST00000636212 MOXD2PA6NHM9 499 aa22.21■■□□□ 1.15
CLN6-213ENST00000636212 ADAMTS4O75173 837 aa22.21■■□□□ 1.15
CLN6-213ENST00000636212 C6orf222P0C671 652 aaPredicted RBP22.21■■□□□ 1.15
CLN6-213ENST00000636212 SNHG28P0DPA3 235 aa22.21■■□□□ 1.15
CLN6-213ENST00000636212 TRIM60Q495X7 471 aa22.21■■□□□ 1.15
CLN6-213ENST00000636212 NOL8Q76FK4 1167 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms