RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 TTC41PQ6P2S7 1318 aa22.56■■□□□ 1.2
SMN2-215ENST00000628696 OAZ1P54368 228 aa22.55■■□□□ 1.2
SMN2-215ENST00000628696 PPARAQ07869 468 aa22.55■■□□□ 1.2
SMN2-215ENST00000628696 IKQ13123 557 aaPredicted RBP22.55■■□□□ 1.2
SMN2-215ENST00000628696 CCDC144BQ3MJ40 725 aa22.55■■□□□ 1.2
SMN2-215ENST00000628696 ARMCX2Q7L311 632 aa22.55■■□□□ 1.2
SMN2-215ENST00000628696 ANKRD33Q7Z3H0 272 aa22.55■■□□□ 1.2
SMN2-215ENST00000628696 MYLIPQ8WY64 445 aa22.55■■□□□ 1.2
SMN2-215ENST00000628696 GLT1D1Q96MS3 346 aa22.55■■□□□ 1.2
SMN2-215ENST00000628696 TOX2Q96NM4 488 aa22.55■■□□□ 1.2
SMN2-215ENST00000628696 TTYH1Q9H313 450 aaPredicted RBP22.55■■□□□ 1.2
SMN2-215ENST00000628696 ABHD16BQ9H3Z7 469 aa22.55■■□□□ 1.2
SMN2-215ENST00000628696 SYNPO2Q9UMS6 1093 aa22.55■■□□□ 1.2
SMN2-215ENST00000628696 CCSAPQ6IQ19 270 aaPredicted RBP22.54■■□□□ 1.2
SMN2-215ENST00000628696 PCSK9Q8NBP7 692 aaKnown RBP22.54■■□□□ 1.2
SMN2-215ENST00000628696 OTUD7AQ8TE49 926 aaPredicted RBP22.54■■□□□ 1.2
SMN2-215ENST00000628696 FGD4Q96M96 766 aa22.54■■□□□ 1.2
SMN2-215ENST00000628696 ADCY6O43306 1168 aa22.53■■□□□ 1.2
SMN2-215ENST00000628696 ASGR1P07306 291 aa22.53■■□□□ 1.2
SMN2-215ENST00000628696 STAT2P52630 851 aa22.53■■□□□ 1.2
SMN2-215ENST00000628696 CNTN2Q02246 1040 aa22.53■■□□□ 1.2
SMN2-215ENST00000628696 GNASQ5JWF2 1037 aa22.53■■□□□ 1.2
SMN2-215ENST00000628696 ZMYM1Q5SVZ6 1142 aa22.53■■□□□ 1.2
SMN2-215ENST00000628696 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.53■■□□□ 1.2
SMN2-215ENST00000628696 CCDC144CPQ8IYA2 1237 aa22.53■■□□□ 1.2
SMN2-215ENST00000628696 PI4K2BQ8TCG2 481 aa22.53■■□□□ 1.2
SMN2-215ENST00000628696 CHURC1Q8WUH1 139 aa22.53■■□□□ 1.2
SMN2-215ENST00000628696 COL25A1Q9BXS0 654 aaPredicted RBP22.53■■□□□ 1.2
SMN2-215ENST00000628696 PCDHB15Q9Y5E8 787 aa22.53■■□□□ 1.2
SMN2-215ENST00000628696 PLIN4Q96Q06 1357 aa22.52■■□□□ 1.2
SMN2-215ENST00000628696 FDX1P10109 184 aa22.52■■□□□ 1.2
SMN2-215ENST00000628696 MCCP23508 829 aa22.52■■□□□ 1.2
SMN2-215ENST00000628696 SLC1A4P43007 532 aa22.52■■□□□ 1.2
SMN2-215ENST00000628696 NOL8Q76FK4 1167 aaKnown RBP22.52■■□□□ 1.2
SMN2-215ENST00000628696 MAFAQ8NHW3 353 aaPredicted RBP22.52■■□□□ 1.2
SMN2-215ENST00000628696 AGBL1Q96MI9 1066 aa22.52■■□□□ 1.2
SMN2-215ENST00000628696 ACAD9Q9H845 621 aa22.52■■□□□ 1.2
SMN2-215ENST00000628696 ELP1O95163 1332 aa22.52■■□□□ 1.2
SMN2-215ENST00000628696 TIMP1P01033 207 aa22.51■■□□□ 1.19
SMN2-215ENST00000628696 CST5P28325 142 aaPredicted RBP22.51■■□□□ 1.19
SMN2-215ENST00000628696 GJA9P57773 515 aa22.51■■□□□ 1.19
SMN2-215ENST00000628696 FAM160B2Q86V87 743 aa22.51■■□□□ 1.19
SMN2-215ENST00000628696 STAG1Q8WVM7 1258 aa22.51■■□□□ 1.19
SMN2-215ENST00000628696 UPF3AQ9H1J1 476 aaKnown RBP22.51■■□□□ 1.19
SMN2-215ENST00000628696 INCENPQ9NQS7 918 aa22.51■■□□□ 1.19
SMN2-215ENST00000628696 RNF146Q9NTX7 359 aa22.51■■□□□ 1.19
SMN2-215ENST00000628696 STX8Q9UNK0 236 aa22.51■■□□□ 1.19
SMN2-215ENST00000628696 MROH7Q68CQ1 1323 aa22.51■■□□□ 1.19
SMN2-215ENST00000628696 UNC80Q8N2C7 3258 aa22.5■■□□□ 1.19
SMN2-215ENST00000628696 TSPY2A6NKD2 308 aa22.5■■□□□ 1.19
SMN2-215ENST00000628696 ALAS1P13196 640 aa22.5■■□□□ 1.19
SMN2-215ENST00000628696 FOSL2P15408 326 aa22.5■■□□□ 1.19
SMN2-215ENST00000628696 SNAP25P60880 206 aa22.5■■□□□ 1.19
SMN2-215ENST00000628696 CTDSPL2Q05D32 466 aa22.5■■□□□ 1.19
SMN2-215ENST00000628696 CCDC174Q6PII3 467 aa22.5■■□□□ 1.19
SMN2-215ENST00000628696 CCDC129Q6ZRS4 1044 aa22.5■■□□□ 1.19
SMN2-215ENST00000628696 KCTD1Q719H9 257 aa22.5■■□□□ 1.19
SMN2-215ENST00000628696 GMCL1Q96IK5 515 aa22.5■■□□□ 1.19
SMN2-215ENST00000628696 TRERF1Q96PN7 1200 aa22.5■■□□□ 1.19
SMN2-215ENST00000628696 MTMR7Q9Y216 660 aa22.5■■□□□ 1.19
SMN2-215ENST00000628696 A0A0U1RQG5 324 aaPredicted RBP22.49■■□□□ 1.19
SMN2-215ENST00000628696 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.49■■□□□ 1.19
SMN2-215ENST00000628696 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.49■■□□□ 1.19
SMN2-215ENST00000628696 MX1P20591 662 aa22.49■■□□□ 1.19
SMN2-215ENST00000628696 CDK7P50613 346 aa22.49■■□□□ 1.19
SMN2-215ENST00000628696 TNFAIP2Q03169 654 aa22.49■■□□□ 1.19
SMN2-215ENST00000628696 PPP4R3BQ5MIZ7 849 aa22.49■■□□□ 1.19
SMN2-215ENST00000628696 FAM133AQ8N9E0 248 aa22.49■■□□□ 1.19
SMN2-215ENST00000628696 A1CFQ9NQ94 594 aaKnown RBP22.49■■□□□ 1.19
SMN2-215ENST00000628696 TBX21Q9UL17 535 aa22.49■■□□□ 1.19
SMN2-215ENST00000628696 ZNF536O15090 1300 aa22.49■■□□□ 1.19
SMN2-215ENST00000628696 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.48■■□□□ 1.19
SMN2-215ENST00000628696 SOWAHBA6NEL2 793 aa22.48■■□□□ 1.19
SMN2-215ENST00000628696 ARVCFO00192 962 aa22.48■■□□□ 1.19
SMN2-215ENST00000628696 BEX3Q00994 111 aa22.48■■□□□ 1.19
SMN2-215ENST00000628696 RCSD1Q6JBY9 416 aa22.48■■□□□ 1.19
SMN2-215ENST00000628696 MFSD5Q6N075 450 aa22.48■■□□□ 1.19
SMN2-215ENST00000628696 KATNBL1Q9H079 304 aa22.48■■□□□ 1.19
SMN2-215ENST00000628696 ZBTB47Q9UFB7 747 aaPredicted RBP22.48■■□□□ 1.19
SMN2-215ENST00000628696 TLR3O15455 904 aaKnown RBP22.47■■□□□ 1.19
SMN2-215ENST00000628696 RANBP6O60518 1105 aaKnown RBP22.47■■□□□ 1.19
SMN2-215ENST00000628696 NMT2O60551 498 aa22.47■■□□□ 1.19
SMN2-215ENST00000628696 PPIGQ13427 754 aaKnown RBP eCLIP22.47■■□□□ 1.19
SMN2-215ENST00000628696 TKFCQ3LXA3 575 aa22.47■■□□□ 1.19
SMN2-215ENST00000628696 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.47■■□□□ 1.19
SMN2-215ENST00000628696 PPP1R12CQ9BZL4 782 aa22.47■■□□□ 1.19
SMN2-215ENST00000628696 IL17RBQ9NRM6 502 aa22.47■■□□□ 1.19
SMN2-215ENST00000628696 ASB14A6NK59 587 aa22.46■■□□□ 1.19
SMN2-215ENST00000628696 DNAJB2P25686 324 aa22.46■■□□□ 1.19
SMN2-215ENST00000628696 PRR12Q9ULL5 1215 aa22.46■■□□□ 1.19
SMN2-215ENST00000628696 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.46■■□□□ 1.19
SMN2-215ENST00000628696 DDX49Q9Y6V7 483 aaKnown RBP22.46■■□□□ 1.19
SMN2-215ENST00000628696 MYO9BQ13459 2157 aa22.45■■□□□ 1.18
SMN2-215ENST00000628696 TMEM265A0A087WTH1 108 aa22.45■■□□□ 1.18
SMN2-215ENST00000628696 CTAGE5O15320 804 aa22.45■■□□□ 1.18
SMN2-215ENST00000628696 PLA2G6O60733 806 aa22.45■■□□□ 1.18
SMN2-215ENST00000628696 CCDC96Q2M329 555 aa22.45■■□□□ 1.18
SMN2-215ENST00000628696 ANKRD45Q5TZF3 282 aa22.45■■□□□ 1.18
SMN2-215ENST00000628696 CXCL17Q6UXB2 119 aa22.45■■□□□ 1.18
SMN2-215ENST00000628696 RASGRP2Q7LDG7 609 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms