RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 SLC1A4P43007 532 aa21.21■□□□□ 0.99
SMN2-213ENST00000614240 STAT2P52630 851 aa21.21■□□□□ 0.99
SMN2-213ENST00000614240 EPHB4P54760 987 aa21.21■□□□□ 0.99
SMN2-213ENST00000614240 FAAP100Q0VG06 881 aa21.21■□□□□ 0.99
SMN2-213ENST00000614240 CCDC144BQ3MJ40 725 aa21.21■□□□□ 0.99
SMN2-213ENST00000614240 NOL8Q76FK4 1167 aaKnown RBP21.21■□□□□ 0.99
SMN2-213ENST00000614240 ARMCX2Q7L311 632 aa21.21■□□□□ 0.99
SMN2-213ENST00000614240 CHURC1Q8WUH1 139 aa21.21■□□□□ 0.99
SMN2-213ENST00000614240 ZBTB47Q9UFB7 747 aaPredicted RBP21.21■□□□□ 0.99
SMN2-213ENST00000614240 MYADML2A6NDP7 307 aa21.2■□□□□ 0.98
SMN2-213ENST00000614240 GNASQ5JWF2 1037 aa21.2■□□□□ 0.98
SMN2-213ENST00000614240 PPP4R3BQ5MIZ7 849 aa21.2■□□□□ 0.98
SMN2-213ENST00000614240 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.2■□□□□ 0.98
SMN2-213ENST00000614240 FAM160B2Q86V87 743 aa21.2■□□□□ 0.98
SMN2-213ENST00000614240 ACAD9Q9H845 621 aa21.2■□□□□ 0.98
SMN2-213ENST00000614240 ASGR1P07306 291 aa21.19■□□□□ 0.98
SMN2-213ENST00000614240 MCCP23508 829 aa21.19■□□□□ 0.98
SMN2-213ENST00000614240 CST5P28325 142 aaPredicted RBP21.19■□□□□ 0.98
SMN2-213ENST00000614240 CNTN2Q02246 1040 aa21.19■□□□□ 0.98
SMN2-213ENST00000614240 ZMYM1Q5SVZ6 1142 aa21.19■□□□□ 0.98
SMN2-213ENST00000614240 CCSAPQ6IQ19 270 aaPredicted RBP21.19■□□□□ 0.98
SMN2-213ENST00000614240 CCDC144CPQ8IYA2 1237 aa21.19■□□□□ 0.98
SMN2-213ENST00000614240 MAFAQ8NHW3 353 aaPredicted RBP21.19■□□□□ 0.98
SMN2-213ENST00000614240 PI4K2BQ8TCG2 481 aa21.19■□□□□ 0.98
SMN2-213ENST00000614240 STAG1Q8WVM7 1258 aa21.19■□□□□ 0.98
SMN2-213ENST00000614240 STX8Q9UNK0 236 aa21.19■□□□□ 0.98
SMN2-213ENST00000614240 ELP1O95163 1332 aa21.19■□□□□ 0.98
SMN2-213ENST00000614240 MROH7Q68CQ1 1323 aa21.19■□□□□ 0.98
SMN2-213ENST00000614240 TSPY2A6NKD2 308 aa21.18■□□□□ 0.98
SMN2-213ENST00000614240 TIMP1P01033 207 aa21.18■□□□□ 0.98
SMN2-213ENST00000614240 MX1P20591 662 aa21.18■□□□□ 0.98
SMN2-213ENST00000614240 IRX5P78411 483 aaPredicted RBP21.18■□□□□ 0.98
SMN2-213ENST00000614240 OTUD7AQ8TE49 926 aaPredicted RBP21.18■□□□□ 0.98
SMN2-213ENST00000614240 MYLIPQ8WY64 445 aa21.18■□□□□ 0.98
SMN2-213ENST00000614240 GMCL1Q96IK5 515 aa21.18■□□□□ 0.98
SMN2-213ENST00000614240 FGD4Q96M96 766 aa21.18■□□□□ 0.98
SMN2-213ENST00000614240 AGBL1Q96MI9 1066 aa21.18■□□□□ 0.98
SMN2-213ENST00000614240 TTYH1Q9H313 450 aaPredicted RBP21.18■□□□□ 0.98
SMN2-213ENST00000614240 RNF146Q9NTX7 359 aa21.18■□□□□ 0.98
SMN2-213ENST00000614240 PLIN4Q96Q06 1357 aa21.18■□□□□ 0.98
SMN2-213ENST00000614240 A0A0U1RQG5 324 aaPredicted RBP21.17■□□□□ 0.98
SMN2-213ENST00000614240 GJA9P57773 515 aa21.17■□□□□ 0.98
SMN2-213ENST00000614240 COL25A1Q9BXS0 654 aaPredicted RBP21.17■□□□□ 0.98
SMN2-213ENST00000614240 UPF3AQ9H1J1 476 aaKnown RBP21.17■□□□□ 0.98
SMN2-213ENST00000614240 MTMR7Q9Y216 660 aa21.17■□□□□ 0.98
SMN2-213ENST00000614240 PCDHB15Q9Y5E8 787 aa21.17■□□□□ 0.98
SMN2-213ENST00000614240 DNAH12Q6ZR08 3092 aa21.17■□□□□ 0.98
SMN2-213ENST00000614240 MYH4Q9Y623 1939 aa21.16■□□□□ 0.98
SMN2-213ENST00000614240 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.16■□□□□ 0.98
SMN2-213ENST00000614240 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.16■□□□□ 0.98
SMN2-213ENST00000614240 ASB14A6NK59 587 aa21.16■□□□□ 0.98
SMN2-213ENST00000614240 TLR3O15455 904 aaKnown RBP21.16■□□□□ 0.98
SMN2-213ENST00000614240 ADCY6O43306 1168 aa21.16■□□□□ 0.98
SMN2-213ENST00000614240 ALAS1P13196 640 aa21.16■□□□□ 0.98
SMN2-213ENST00000614240 FOSL2P15408 326 aa21.16■□□□□ 0.98
SMN2-213ENST00000614240 TNFAIP2Q03169 654 aa21.16■□□□□ 0.98
SMN2-213ENST00000614240 CTDSPL2Q05D32 466 aa21.16■□□□□ 0.98
SMN2-213ENST00000614240 TKFCQ3LXA3 575 aa21.16■□□□□ 0.98
SMN2-213ENST00000614240 CCDC174Q6PII3 467 aa21.16■□□□□ 0.98
SMN2-213ENST00000614240 CCDC129Q6ZRS4 1044 aa21.16■□□□□ 0.98
SMN2-213ENST00000614240 KCTD1Q719H9 257 aa21.16■□□□□ 0.98
SMN2-213ENST00000614240 TRERF1Q96PN7 1200 aa21.16■□□□□ 0.98
SMN2-213ENST00000614240 COL6A3P12111 3177 aa21.16■□□□□ 0.98
SMN2-213ENST00000614240 TMEM265A0A087WTH1 108 aa21.15■□□□□ 0.98
SMN2-213ENST00000614240 ARVCFO00192 962 aa21.15■□□□□ 0.98
SMN2-213ENST00000614240 SNAP25P60880 206 aa21.15■□□□□ 0.98
SMN2-213ENST00000614240 PPIGQ13427 754 aaKnown RBP eCLIP21.15■□□□□ 0.98
SMN2-213ENST00000614240 RCSD1Q6JBY9 416 aa21.15■□□□□ 0.98
SMN2-213ENST00000614240 MFSD5Q6N075 450 aa21.15■□□□□ 0.98
SMN2-213ENST00000614240 FAM133AQ8N9E0 248 aa21.15■□□□□ 0.98
SMN2-213ENST00000614240 A1CFQ9NQ94 594 aaKnown RBP21.15■□□□□ 0.98
SMN2-213ENST00000614240 TBX21Q9UL17 535 aa21.15■□□□□ 0.98
SMN2-213ENST00000614240 RANBP6O60518 1105 aaKnown RBP21.14■□□□□ 0.97
SMN2-213ENST00000614240 CDK7P50613 346 aa21.14■□□□□ 0.97
SMN2-213ENST00000614240 BEX3Q00994 111 aa21.14■□□□□ 0.97
SMN2-213ENST00000614240 TMEM199Q8N511 208 aa21.14■□□□□ 0.97
SMN2-213ENST00000614240 AP5M1Q9H0R1 490 aa21.14■□□□□ 0.97
SMN2-213ENST00000614240 INCENPQ9NQS7 918 aa21.14■□□□□ 0.97
SMN2-213ENST00000614240 CUL9Q8IWT3 2517 aa21.13■□□□□ 0.97
SMN2-213ENST00000614240 ZNF536O15090 1300 aa21.13■□□□□ 0.97
SMN2-213ENST00000614240 SOWAHBA6NEL2 793 aa21.13■□□□□ 0.97
SMN2-213ENST00000614240 NMT2O60551 498 aa21.13■□□□□ 0.97
SMN2-213ENST00000614240 PLA2G6O60733 806 aa21.13■□□□□ 0.97
SMN2-213ENST00000614240 CCDC96Q2M329 555 aa21.13■□□□□ 0.97
SMN2-213ENST00000614240 PPP1R12CQ9BZL4 782 aa21.13■□□□□ 0.97
SMN2-213ENST00000614240 TOMM22Q9NS69 142 aa21.13■□□□□ 0.97
SMN2-213ENST00000614240 PRR12Q9ULL5 1215 aa21.13■□□□□ 0.97
SMN2-213ENST00000614240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.13■□□□□ 0.97
SMN2-213ENST00000614240 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.12■□□□□ 0.97
SMN2-213ENST00000614240 DNAJB2P25686 324 aa21.12■□□□□ 0.97
SMN2-213ENST00000614240 ANKRD45Q5TZF3 282 aa21.12■□□□□ 0.97
SMN2-213ENST00000614240 NSMFQ6X4W1 530 aa21.12■□□□□ 0.97
SMN2-213ENST00000614240 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.12■□□□□ 0.97
SMN2-213ENST00000614240 KATNBL1Q9H079 304 aa21.12■□□□□ 0.97
SMN2-213ENST00000614240 IL17RBQ9NRM6 502 aa21.12■□□□□ 0.97
SMN2-213ENST00000614240 CCPG1Q9ULG6 757 aa21.12■□□□□ 0.97
SMN2-213ENST00000614240 ZEB2O60315 1214 aa21.11■□□□□ 0.97
SMN2-213ENST00000614240 CSF2RAP15509 400 aa21.11■□□□□ 0.97
SMN2-213ENST00000614240 CXCL17Q6UXB2 119 aa21.11■□□□□ 0.97
SMN2-213ENST00000614240 EEPD1Q7L9B9 569 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms