RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 TSPY2A6NKD2 308 aa21.07■□□□□ 0.96
SSBP1-215ENST00000612337 DUSP11O75319 330 aaKnown RBP21.07■□□□□ 0.96
SSBP1-215ENST00000612337 CLTBP09497 229 aa21.07■□□□□ 0.96
SSBP1-215ENST00000612337 PDE1AP54750 535 aa21.07■□□□□ 0.96
SSBP1-215ENST00000612337 CTDSPL2Q05D32 466 aa21.07■□□□□ 0.96
SSBP1-215ENST00000612337 HDAC1Q13547 482 aaPredicted RBP21.07■□□□□ 0.96
SSBP1-215ENST00000612337 VPS53Q5VIR6 699 aa21.07■□□□□ 0.96
SSBP1-215ENST00000612337 ABHD16BQ9H3Z7 469 aa21.07■□□□□ 0.96
SSBP1-215ENST00000612337 IL17RBQ9NRM6 502 aa21.07■□□□□ 0.96
SSBP1-215ENST00000612337 HELLSQ9NRZ9 838 aa21.07■□□□□ 0.96
SSBP1-215ENST00000612337 ANAPC4Q9UJX5 808 aa21.07■□□□□ 0.96
SSBP1-215ENST00000612337 CDH23Q9H251 3354 aa21.06■□□□□ 0.96
SSBP1-215ENST00000612337 MCCP23508 829 aa21.06■□□□□ 0.96
SSBP1-215ENST00000612337 ACLYP53396 1101 aa21.06■□□□□ 0.96
SSBP1-215ENST00000612337 MAPK8IP2Q13387 824 aaPredicted RBP21.06■□□□□ 0.96
SSBP1-215ENST00000612337 SHHQ15465 462 aa21.06■□□□□ 0.96
SSBP1-215ENST00000612337 ALX1Q15699 326 aa21.06■□□□□ 0.96
SSBP1-215ENST00000612337 C9orf50Q5SZB4 431 aa21.06■□□□□ 0.96
SSBP1-215ENST00000612337 CCSAPQ6IQ19 270 aaPredicted RBP21.06■□□□□ 0.96
SSBP1-215ENST00000612337 ARMCX2Q7L311 632 aa21.06■□□□□ 0.96
SSBP1-215ENST00000612337 NUP133Q8WUM0 1156 aa21.06■□□□□ 0.96
SSBP1-215ENST00000612337 ACAD9Q9H845 621 aa21.06■□□□□ 0.96
SSBP1-215ENST00000612337 INCENPQ9NQS7 918 aa21.06■□□□□ 0.96
SSBP1-215ENST00000612337 HOMER2Q9NSB8 354 aa21.06■□□□□ 0.96
SSBP1-215ENST00000612337 ZNF536O15090 1300 aa21.05■□□□□ 0.96
SSBP1-215ENST00000612337 PQBP1O60828 265 aaKnown RBP21.05■□□□□ 0.96
SSBP1-215ENST00000612337 CST5P28325 142 aaPredicted RBP21.05■□□□□ 0.96
SSBP1-215ENST00000612337 IKQ13123 557 aaPredicted RBP21.05■□□□□ 0.96
SSBP1-215ENST00000612337 KCNA10Q16322 511 aa21.05■□□□□ 0.96
SSBP1-215ENST00000612337 TKFCQ3LXA3 575 aa21.05■□□□□ 0.96
SSBP1-215ENST00000612337 RCSD1Q6JBY9 416 aa21.05■□□□□ 0.96
SSBP1-215ENST00000612337 TICAM2Q86XR7 235 aa21.05■□□□□ 0.96
SSBP1-215ENST00000612337 TOX2Q96NM4 488 aa21.05■□□□□ 0.96
SSBP1-215ENST00000612337 STARD7Q9NQZ5 370 aa21.05■□□□□ 0.96
SSBP1-215ENST00000612337 KIAA0355O15063 1070 aa21.04■□□□□ 0.96
SSBP1-215ENST00000612337 ADCY6O43306 1168 aa21.04■□□□□ 0.96
SSBP1-215ENST00000612337 ORC4O43929 436 aa21.04■□□□□ 0.96
SSBP1-215ENST00000612337 RANBP6O60518 1105 aaKnown RBP21.04■□□□□ 0.96
SSBP1-215ENST00000612337 NMT2O60551 498 aa21.04■□□□□ 0.96
SSBP1-215ENST00000612337 FGRP09769 529 aa21.04■□□□□ 0.96
SSBP1-215ENST00000612337 ITGB8P26012 769 aa21.04■□□□□ 0.96
SSBP1-215ENST00000612337 NOVP48745 357 aa21.04■□□□□ 0.96
SSBP1-215ENST00000612337 CCDC144BQ3MJ40 725 aa21.04■□□□□ 0.96
SSBP1-215ENST00000612337 KCTD1Q719H9 257 aa21.04■□□□□ 0.96
SSBP1-215ENST00000612337 ANKRD33Q7Z3H0 272 aa21.04■□□□□ 0.96
SSBP1-215ENST00000612337 CCDC144CPQ8IYA2 1237 aa21.04■□□□□ 0.96
SSBP1-215ENST00000612337 FAM133AQ8N9E0 248 aa21.04■□□□□ 0.96
SSBP1-215ENST00000612337 AGBL1Q96MI9 1066 aa21.04■□□□□ 0.96
SSBP1-215ENST00000612337 A1CFQ9NQ94 594 aaKnown RBP21.04■□□□□ 0.96
SSBP1-215ENST00000612337 RNF146Q9NTX7 359 aa21.04■□□□□ 0.96
SSBP1-215ENST00000612337 EYSQ5T1H1 3165 aa21.03■□□□□ 0.96
SSBP1-215ENST00000612337 MYADML2A6NDP7 307 aa21.03■□□□□ 0.96
SSBP1-215ENST00000612337 CNTN2Q02246 1040 aa21.03■□□□□ 0.96
SSBP1-215ENST00000612337 PCSK9Q8NBP7 692 aaKnown RBP21.03■□□□□ 0.96
SSBP1-215ENST00000612337 CHMP4CQ96CF2 233 aa21.03■□□□□ 0.96
SSBP1-215ENST00000612337 TRERF1Q96PN7 1200 aa21.03■□□□□ 0.96
SSBP1-215ENST00000612337 KATNBL1Q9H079 304 aa21.03■□□□□ 0.96
SSBP1-215ENST00000612337 UPF3AQ9H1J1 476 aaKnown RBP21.03■□□□□ 0.96
SSBP1-215ENST00000612337 SPC25Q9HBM1 224 aa21.03■□□□□ 0.96
SSBP1-215ENST00000612337 CUL9Q8IWT3 2517 aa21.03■□□□□ 0.96
SSBP1-215ENST00000612337 C6orf222P0C671 652 aaPredicted RBP21.02■□□□□ 0.96
SSBP1-215ENST00000612337 RAG1P15918 1043 aa21.02■□□□□ 0.96
SSBP1-215ENST00000612337 GJA9P57773 515 aa21.02■□□□□ 0.96
SSBP1-215ENST00000612337 FAAP100Q0VG06 881 aa21.02■□□□□ 0.96
SSBP1-215ENST00000612337 MCMDC2Q4G0Z9 681 aa21.02■□□□□ 0.96
SSBP1-215ENST00000612337 FAM227BQ96M60 508 aa21.02■□□□□ 0.96
SSBP1-215ENST00000612337 TMEM39AQ9NV64 488 aa21.02■□□□□ 0.96
SSBP1-215ENST00000612337 PRR12Q9ULL5 1215 aa21.02■□□□□ 0.96
SSBP1-215ENST00000612337 ELP1O95163 1332 aa21.02■□□□□ 0.95
SSBP1-215ENST00000612337 A0A0D9SFI3 127 aa21.01■□□□□ 0.95
SSBP1-215ENST00000612337 DCDC2CA8MYV0 355 aa21.01■□□□□ 0.95
SSBP1-215ENST00000612337 FGAP02671 866 aa21.01■□□□□ 0.95
SSBP1-215ENST00000612337 ALAS1P13196 640 aa21.01■□□□□ 0.95
SSBP1-215ENST00000612337 ZNF697Q5TEC3 545 aa21.01■□□□□ 0.95
SSBP1-215ENST00000612337 CCDC174Q6PII3 467 aa21.01■□□□□ 0.95
SSBP1-215ENST00000612337 RASGRP2Q7LDG7 609 aa21.01■□□□□ 0.95
SSBP1-215ENST00000612337 DCAF4Q8WV16 495 aa21.01■□□□□ 0.95
SSBP1-215ENST00000612337 GLT1D1Q96MS3 346 aa21.01■□□□□ 0.95
SSBP1-215ENST00000612337 GUCD1Q96NT3 240 aa21.01■□□□□ 0.95
SSBP1-215ENST00000612337 ZMYM6O95789 1325 aa21.01■□□□□ 0.95
SSBP1-215ENST00000612337 SOWAHBA6NEL2 793 aa21■□□□□ 0.95
SSBP1-215ENST00000612337 ASB14A6NK59 587 aa21■□□□□ 0.95
SSBP1-215ENST00000612337 ASGR1P07306 291 aa21■□□□□ 0.95
SSBP1-215ENST00000612337 IRX5P78411 483 aaPredicted RBP21■□□□□ 0.95
SSBP1-215ENST00000612337 AAMPQ13685 434 aa21■□□□□ 0.95
SSBP1-215ENST00000612337 MROH7Q68CQ1 1323 aa21■□□□□ 0.95
SSBP1-215ENST00000612337 HSPD1P10809 573 aaKnown RBP20.99■□□□□ 0.95
SSBP1-215ENST00000612337 CDK7P50613 346 aa20.99■□□□□ 0.95
SSBP1-215ENST00000612337 SNAP25P60880 206 aa20.99■□□□□ 0.95
SSBP1-215ENST00000612337 NKX3-2P78367 333 aa20.99■□□□□ 0.95
SSBP1-215ENST00000612337 SMAD3P84022 425 aaKnown RBP20.99■□□□□ 0.95
SSBP1-215ENST00000612337 GNASQ5JWF2 1037 aa20.99■□□□□ 0.95
SSBP1-215ENST00000612337 FAM161BQ96MY7 647 aa20.99■□□□□ 0.95
SSBP1-215ENST00000612337 TOMM22Q9NS69 142 aa20.99■□□□□ 0.95
SSBP1-215ENST00000612337 TCP11L1Q9NUJ3 509 aa20.99■□□□□ 0.95
SSBP1-215ENST00000612337 MTMR7Q9Y216 660 aa20.99■□□□□ 0.95
SSBP1-215ENST00000612337 DLL1O00548 723 aa20.98■□□□□ 0.95
SSBP1-215ENST00000612337 CTAGE5O15320 804 aa20.98■□□□□ 0.95
SSBP1-215ENST00000612337 EPHB4P54760 987 aa20.98■□□□□ 0.95
SSBP1-215ENST00000612337 TNFAIP2Q03169 654 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms