RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 MFSD14CQ5VZR4 134 aa30.45■■■□□ 2.47
VEGFA-226ENST00000611736 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.45■■■□□ 2.473e-7■■■■□ 25.4
VEGFA-226ENST00000611736 RANBP17Q9H2T7 1088 aaKnown RBP30.45■■■□□ 2.47
VEGFA-226ENST00000611736 CPVLQ9H3G5 476 aa30.45■■■□□ 2.47
VEGFA-226ENST00000611736 SENP2Q9HC62 589 aa30.45■■■□□ 2.47
VEGFA-226ENST00000611736 HMX1Q9NP08 348 aaPredicted RBP30.45■■■□□ 2.47
VEGFA-226ENST00000611736 RPTORQ8N122 1335 aa30.45■■■□□ 2.46
VEGFA-226ENST00000611736 SMCHD1A6NHR9 2005 aa30.44■■■□□ 2.46
VEGFA-226ENST00000611736 TNRC18O15417 2968 aaPredicted RBP30.44■■■□□ 2.46
VEGFA-226ENST00000611736 TAL1P17542 331 aaPredicted RBP30.44■■■□□ 2.46
VEGFA-226ENST00000611736 CHST13Q8NET6 341 aa30.44■■■□□ 2.46
VEGFA-226ENST00000611736 DEFB118Q96PH6 123 aa30.44■■■□□ 2.46
VEGFA-226ENST00000611736 UBA5Q9GZZ9 404 aa30.44■■■□□ 2.46
VEGFA-226ENST00000611736 PAK6Q9NQU5 681 aaPredicted RBP30.44■■■□□ 2.46
VEGFA-226ENST00000611736 PARP1P09874 1014 aaKnown RBP30.43■■■□□ 2.46
VEGFA-226ENST00000611736 ALAS1P13196 640 aa30.43■■■□□ 2.46
VEGFA-226ENST00000611736 CYP2C19P33261 490 aa30.43■■■□□ 2.46
VEGFA-226ENST00000611736 ASPRV1Q53RT3 343 aa30.43■■■□□ 2.46
VEGFA-226ENST00000611736 RNF146Q9NTX7 359 aa30.43■■■□□ 2.46
VEGFA-226ENST00000611736 FBXO40Q9UH90 709 aa30.43■■■□□ 2.46
VEGFA-226ENST00000611736 PLXNA1Q9UIW2 1896 aa30.43■■■□□ 2.46
VEGFA-226ENST00000611736 CCPG1Q9ULG6 757 aa30.43■■■□□ 2.46
VEGFA-226ENST00000611736 PRC1O43663 620 aa30.42■■■□□ 2.46
VEGFA-226ENST00000611736 GJA8P48165 433 aa30.42■■■□□ 2.46
VEGFA-226ENST00000611736 COL9A3Q14050 684 aaPredicted RBP30.42■■■□□ 2.46
VEGFA-226ENST00000611736 OLFML2BQ68BL8 750 aa30.42■■■□□ 2.46
VEGFA-226ENST00000611736 U2AF1L4Q8WU68 220 aaKnown RBP30.42■■■□□ 2.46
VEGFA-226ENST00000611736 SHISA4Q96DD7 197 aa30.42■■■□□ 2.46
VEGFA-226ENST00000611736 DDX11Q96FC9 970 aa30.42■■■□□ 2.46
VEGFA-226ENST00000611736 ACAD9Q9H845 621 aa30.42■■■□□ 2.46
VEGFA-226ENST00000611736 ICAM1P05362 532 aa30.41■■■□□ 2.46
VEGFA-226ENST00000611736 MCM5P33992 734 aa30.41■■■□□ 2.46
VEGFA-226ENST00000611736 ANKRD35Q8N283 1001 aa30.41■■■□□ 2.46
VEGFA-226ENST00000611736 IGDCC4Q8TDY8 1250 aa30.41■■■□□ 2.46
VEGFA-226ENST00000611736 MAML3Q96JK9 1138 aa30.41■■■□□ 2.46
VEGFA-226ENST00000611736 TRERF1Q96PN7 1200 aa30.41■■■□□ 2.46
VEGFA-226ENST00000611736 PDE4DIPQ5VU43 2346 aa30.41■■■□□ 2.46
VEGFA-226ENST00000611736 CCND3P30281 292 aaPredicted RBP30.4■■■□□ 2.46
VEGFA-226ENST00000611736 ZNF792Q3KQV3 632 aa30.4■■■□□ 2.46
VEGFA-226ENST00000611736 TKFCQ3LXA3 575 aa30.4■■■□□ 2.46
VEGFA-226ENST00000611736 RASEFQ8IZ41 740 aa30.4■■■□□ 2.46
VEGFA-226ENST00000611736 GPHNQ9NQX3 736 aaPredicted RBP30.4■■■□□ 2.46
VEGFA-226ENST00000611736 SGPL1O95470 568 aa30.39■■■□□ 2.46
VEGFA-226ENST00000611736 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.39■■■□□ 2.465e-6■□□□□ 9.9
VEGFA-226ENST00000611736 REC8O95072 547 aa30.38■■■□□ 2.45
VEGFA-226ENST00000611736 IGHA2P01877 340 aa30.38■■■□□ 2.45
VEGFA-226ENST00000611736 STAG2Q8N3U4 1231 aa30.38■■■□□ 2.45
VEGFA-226ENST00000611736 LY9Q9HBG7 655 aa30.38■■■□□ 2.45
VEGFA-226ENST00000611736 DHX16O60231 1041 aaKnown RBP30.37■■■□□ 2.45
VEGFA-226ENST00000611736 TFRCP02786 760 aaKnown RBP30.37■■■□□ 2.45
VEGFA-226ENST00000611736 MUM1L1Q5H9M0 696 aa30.37■■■□□ 2.45
VEGFA-226ENST00000611736 ADGRF4Q8IZF3 695 aa30.37■■■□□ 2.45
VEGFA-226ENST00000611736 LRRC2Q9BYS8 371 aa30.37■■■□□ 2.45
VEGFA-226ENST00000611736 DIS3Q9Y2L1 958 aaKnown RBP30.37■■■□□ 2.45
VEGFA-226ENST00000611736 DNAJC25-GNG10A0A024R161 153 aa30.36■■■□□ 2.45
VEGFA-226ENST00000611736 CATIPQ7Z7H3 387 aa30.36■■■□□ 2.45
VEGFA-226ENST00000611736 TRPV1Q8NER1 839 aa30.36■■■□□ 2.45
VEGFA-226ENST00000611736 TMEM87BQ96K49 555 aa30.36■■■□□ 2.45
VEGFA-226ENST00000611736 NEK1Q96PY6 1258 aa30.36■■■□□ 2.45
VEGFA-226ENST00000611736 VAT1LQ9HCJ6 419 aa30.36■■■□□ 2.45
VEGFA-226ENST00000611736 A1CFQ9NQ94 594 aaKnown RBP30.36■■■□□ 2.45
VEGFA-226ENST00000611736 MAD2L2Q9UI95 211 aa30.36■■■□□ 2.45
VEGFA-226ENST00000611736 SH2B2O14492 632 aaPredicted RBP30.35■■■□□ 2.45
VEGFA-226ENST00000611736 CNGA1P29973 690 aa30.35■■■□□ 2.45
VEGFA-226ENST00000611736 GRM4Q14833 912 aa30.35■■■□□ 2.45
VEGFA-226ENST00000611736 CDC37Q16543 378 aaPredicted RBP30.35■■■□□ 2.45
VEGFA-226ENST00000611736 MTA3Q9BTC8 594 aa30.35■■■□□ 2.45
VEGFA-226ENST00000611736 BAZ2BQ9UIF8 2168 aaKnown RBP30.35■■■□□ 2.45
VEGFA-226ENST00000611736 KLRF2D3W0D1 207 aa30.34■■■□□ 2.45
VEGFA-226ENST00000611736 CYBAP13498 195 aa30.34■■■□□ 2.45
VEGFA-226ENST00000611736 ADCK5Q3MIX3 580 aa30.34■■■□□ 2.45
VEGFA-226ENST00000611736 TSGA10IPQ3SY00 556 aa30.34■■■□□ 2.45
VEGFA-226ENST00000611736 PRAMEF19Q5SWL8 479 aa30.34■■■□□ 2.45
VEGFA-226ENST00000611736 NFXL1Q6ZNB6 911 aa30.34■■■□□ 2.45
VEGFA-226ENST00000611736 TINF2Q9BSI4 451 aa30.34■■■□□ 2.45
VEGFA-226ENST00000611736 CRISPLD2Q9H0B8 497 aa30.34■■■□□ 2.45
VEGFA-226ENST00000611736 MYH6P13533 1939 aa30.34■■■□□ 2.45
VEGFA-226ENST00000611736 WDR19Q8NEZ3 1342 aa30.33■■■□□ 2.45
VEGFA-226ENST00000611736 PALM3A6NDB9 673 aaPredicted RBP30.33■■■□□ 2.45
VEGFA-226ENST00000611736 TROAPQ12815 778 aa30.33■■■□□ 2.45
VEGFA-226ENST00000611736 KRT32Q14532 448 aa30.33■■■□□ 2.45
VEGFA-226ENST00000611736 NSMFQ6X4W1 530 aa30.33■■■□□ 2.45
VEGFA-226ENST00000611736 ZNF654Q8IZM8 581 aa30.33■■■□□ 2.45
VEGFA-226ENST00000611736 NUP133Q8WUM0 1156 aa30.33■■■□□ 2.45
VEGFA-226ENST00000611736 PFASO15067 1338 aa30.32■■■□□ 2.44
VEGFA-226ENST00000611736 POTEB2H3BUK9 544 aa30.32■■■□□ 2.44
VEGFA-226ENST00000611736 HSPA4P34932 840 aa30.32■■■□□ 2.44
VEGFA-226ENST00000611736 CNTN2Q02246 1040 aa30.32■■■□□ 2.44
VEGFA-226ENST00000611736 USH1GQ495M9 461 aa30.32■■■□□ 2.44
VEGFA-226ENST00000611736 MYL10Q9BUA6 226 aa30.32■■■□□ 2.44
VEGFA-226ENST00000611736 JMJD4Q9H9V9 463 aa30.32■■■□□ 2.44
VEGFA-226ENST00000611736 PNMA2Q9UL42 364 aa30.32■■■□□ 2.44
VEGFA-226ENST00000611736 MCM3APO60318 1980 aa30.32■■■□□ 2.44
VEGFA-226ENST00000611736 CCDC69A6NI79 296 aa30.31■■■□□ 2.44
VEGFA-226ENST00000611736 NFIBO00712 420 aa30.31■■■□□ 2.44
VEGFA-226ENST00000611736 FGD4Q96M96 766 aa30.31■■■□□ 2.44
VEGFA-226ENST00000611736 TCEANC2Q96MN5 208 aa30.31■■■□□ 2.44
VEGFA-226ENST00000611736 FARP2O94887 1054 aaPredicted RBP30.3■■■□□ 2.44
VEGFA-226ENST00000611736 QRICH1Q2TAL8 776 aa30.3■■■□□ 2.44
VEGFA-226ENST00000611736 TMTC2Q8N394 836 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms