RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 RGS16O15492 202 aaPredicted RBP16.17■□□□□ 0.18
VPS36-207ENST00000611132 CASP1P29466 404 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 PCK1P35558 622 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 PAXIP1Q6ZW49 1069 aaPredicted RBP16.17■□□□□ 0.18
VPS36-207ENST00000611132 FUT8Q9BYC5 575 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 ZBTB16Q05516 673 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 STK36Q9NRP7 1315 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 STIM2Q9P246 746 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 NRKQ7Z2Y5 1582 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 CLGNO14967 610 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 DDAH1O94760 285 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 TNFAIP3P21580 790 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 NELFCDQ8IXH7 590 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 THAP9Q9H5L6 903 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 SLC39A2Q9NP94 309 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 MOCS3O95396 460 aa16.16■□□□□ 0.18
VPS36-207ENST00000611132 LMNTD2Q8IXW0 634 aa16.16■□□□□ 0.18
VPS36-207ENST00000611132 MICAL1Q8TDZ2 1067 aa16.16■□□□□ 0.18
VPS36-207ENST00000611132 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.16■□□□□ 0.18
VPS36-207ENST00000611132 ATP6V0A2Q9Y487 856 aa16.16■□□□□ 0.18
VPS36-207ENST00000611132 H7C1W4 665 aa16.16■□□□□ 0.18
VPS36-207ENST00000611132 CALCRLQ16602 461 aa16.16■□□□□ 0.18
VPS36-207ENST00000611132 HNRNPLLQ8WVV9 542 aaKnown RBP16.16■□□□□ 0.18
VPS36-207ENST00000611132 VIPAS39Q9H9C1 493 aa16.16■□□□□ 0.18
VPS36-207ENST00000611132 MAGEF1Q9HAY2 307 aa16.16■□□□□ 0.18
VPS36-207ENST00000611132 ZC3H13Q5T200 1668 aaKnown RBP16.16■□□□□ 0.18
VPS36-207ENST00000611132 A0A1B0GTH6 734 aa16.16■□□□□ 0.18
VPS36-207ENST00000611132 TMEM132AQ24JP5 1023 aa16.16■□□□□ 0.18
VPS36-207ENST00000611132 GSPT2Q8IYD1 628 aaKnown RBP16.16■□□□□ 0.18
VPS36-207ENST00000611132 FAM13AO94988 1023 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 CDC25AP30304 524 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 MYOCDQ8IZQ8 938 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 NLRP3Q96P20 1036 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 CUEDC2Q9H467 287 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 TBC1D7Q9P0N9 293 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 HGSO14964 777 aaPredicted RBP16.15■□□□□ 0.18
VPS36-207ENST00000611132 GNA14O95837 355 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 CLTAP09496 248 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 OR52Z1P0C646 297 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 TFAP4Q01664 338 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 ST3GAL1Q11201 340 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 VSIG1Q86XK7 387 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 TBC1D10CQ8IV04 446 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.15■□□□□ 0.181e-6■■■■■ 133.2
VPS36-207ENST00000611132 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.15■□□□□ 0.182e-7■■■■□ 22.5
VPS36-207ENST00000611132 CPSF2Q9P2I0 782 aaKnown RBP16.15■□□□□ 0.18
VPS36-207ENST00000611132 CHGBP05060 677 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 FDPSP14324 419 aaKnown RBP16.15■□□□□ 0.18
VPS36-207ENST00000611132 CDC27P30260 824 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 MRPL12P52815 198 aaKnown RBP16.15■□□□□ 0.18
VPS36-207ENST00000611132 POLR2FP61218 127 aaKnown RBP16.15■□□□□ 0.18
VPS36-207ENST00000611132 FMR1Q06787 632 aaKnown RBP eCLIP16.15■□□□□ 0.18
VPS36-207ENST00000611132 RPAINQ86UA6 219 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 ACTR5Q9H9F9 607 aaPredicted RBP16.15■□□□□ 0.18
VPS36-207ENST00000611132 HDAC6Q9UBN7 1215 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 AMFRQ9UKV5 643 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 MYOM1P52179 1685 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 MYL1P05976 194 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 EIF4A3P38919 411 aaKnown RBP16.15■□□□□ 0.18
VPS36-207ENST00000611132 CYB5R4Q7L1T6 521 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 RASGRP2Q7LDG7 609 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 UBL4BQ8N7F7 174 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 LZTS2Q9BRK4 669 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 DPH5Q9H2P9 285 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 GREM2Q9H772 168 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 IKBKGQ9Y6K9 419 aa16.15■□□□□ 0.18
VPS36-207ENST00000611132 CHUKO15111 745 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 LDHBP07195 334 aaKnown RBP16.14■□□□□ 0.17
VPS36-207ENST00000611132 CCNE1P24864 410 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 GCKP35557 465 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 E2F5Q15329 346 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 GDAQ9Y2T3 454 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 LGALS16A8MUM7 142 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 ATP2A1O14983 1001 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 TECP42680 631 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 PPP2R5EQ16537 467 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 REXO1Q8N1G1 1221 aaKnown RBP16.14■□□□□ 0.17
VPS36-207ENST00000611132 WHAMMQ8TF30 809 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 JAG2Q9Y219 1238 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 PCDHA13Q9Y5I0 950 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 USP32Q8NFA0 1604 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 SPOPO43791 374 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 MRPS25P82663 173 aaKnown RBP16.14■□□□□ 0.17
VPS36-207ENST00000611132 CLUL1Q15846 466 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 CCDC174Q6PII3 467 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 RAD9BQ6WBX8 426 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 GPKOWQ92917 476 aaPredicted RBP eCLIP16.14■□□□□ 0.175e-7■■■□□ 17.4
VPS36-207ENST00000611132 NAP1L4Q99733 375 aaKnown RBP16.14■□□□□ 0.17
VPS36-207ENST00000611132 TMEM51Q9NW97 253 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 ABCC12Q96J65 1359 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 INO80Q9ULG1 1556 aaPredicted RBP16.14■□□□□ 0.17
VPS36-207ENST00000611132 ERVV-2B6SEH9 535 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 GBP1P32455 592 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 KIF11P52732 1056 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 GSTA5Q7RTV2 222 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 CCDC63Q8NA47 563 aa16.14■□□□□ 0.17
VPS36-207ENST00000611132 UBN2Q6ZU65 1347 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 CAMSAP1Q5T5Y3 1602 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 USP31Q70CQ4 1352 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 PALLDQ8WX93 1383 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms