RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 COG2Q14746 738 aa21.97■■□□□ 1.11
CCDC9-205ENST00000600117 BTNL9Q6UXG8 535 aa21.97■■□□□ 1.11
CCDC9-205ENST00000600117 STAG2Q8N3U4 1231 aa21.97■■□□□ 1.11
CCDC9-205ENST00000600117 PXYLP1Q8TE99 480 aa21.97■■□□□ 1.11
CCDC9-205ENST00000600117 NUP133Q8WUM0 1156 aa21.97■■□□□ 1.11
CCDC9-205ENST00000600117 PPP1R9AQ9ULJ8 1098 aa21.97■■□□□ 1.11
CCDC9-205ENST00000600117 DOCK3Q8IZD9 2030 aa21.97■■□□□ 1.11
CCDC9-205ENST00000600117 A0A0G2JMZ2 1700 aa21.97■■□□□ 1.11
CCDC9-205ENST00000600117 INHAP05111 366 aa21.96■■□□□ 1.11
CCDC9-205ENST00000600117 PARP1P09874 1014 aaKnown RBP21.96■■□□□ 1.11
CCDC9-205ENST00000600117 CALM1P0DP23 149 aa21.96■■□□□ 1.11
CCDC9-205ENST00000600117 CALM2P0DP24 149 aa21.96■■□□□ 1.11
CCDC9-205ENST00000600117 CALM3P0DP25 149 aa21.96■■□□□ 1.11
CCDC9-205ENST00000600117 RCAN1P53805 252 aa21.96■■□□□ 1.11
CCDC9-205ENST00000600117 HERVK_113P62684 666 aa21.96■■□□□ 1.11
CCDC9-205ENST00000600117 LBX2Q6XYB7 198 aa21.96■■□□□ 1.11
CCDC9-205ENST00000600117 FAM160B2Q86V87 743 aa21.96■■□□□ 1.11
CCDC9-205ENST00000600117 MICU3Q86XE3 530 aa21.96■■□□□ 1.11
CCDC9-205ENST00000600117 SLF1Q9BQI6 1058 aa21.96■■□□□ 1.11
CCDC9-205ENST00000600117 LARP6Q9BRS8 491 aaKnown RBP21.96■■□□□ 1.11
CCDC9-205ENST00000600117 NID2Q14112 1375 aa21.96■■□□□ 1.11
CCDC9-205ENST00000600117 ZBTB43O43298 467 aa21.95■■□□□ 1.1
CCDC9-205ENST00000600117 BMP8BP34820 402 aa21.95■■□□□ 1.1
CCDC9-205ENST00000600117 FLT3LGP49771 235 aa21.95■■□□□ 1.1
CCDC9-205ENST00000600117 STAT2P52630 851 aa21.95■■□□□ 1.1
CCDC9-205ENST00000600117 IRF5Q13568 498 aa21.95■■□□□ 1.1
CCDC9-205ENST00000600117 ANKRD1Q15327 319 aa21.95■■□□□ 1.1
CCDC9-205ENST00000600117 SLC35G1Q2M3R5 365 aa21.95■■□□□ 1.1
CCDC9-205ENST00000600117 SYNE3Q6ZMZ3 975 aa21.95■■□□□ 1.1
CCDC9-205ENST00000600117 ATG4CQ96DT6 458 aa21.95■■□□□ 1.1
CCDC9-205ENST00000600117 DEFB118Q96PH6 123 aa21.95■■□□□ 1.1
CCDC9-205ENST00000600117 PAK6Q9NQU5 681 aaPredicted RBP21.95■■□□□ 1.1
CCDC9-205ENST00000600117 ISY1Q9ULR0 285 aaKnown RBP21.95■■□□□ 1.1
CCDC9-205ENST00000600117 ADAMTS5Q9UNA0 930 aa21.95■■□□□ 1.1
CCDC9-205ENST00000600117 GOLGA8BA8MQT2 603 aa21.94■■□□□ 1.1
CCDC9-205ENST00000600117 ELNP15502 786 aa21.94■■□□□ 1.1
CCDC9-205ENST00000600117 PDIA3P30101 505 aaKnown RBP21.94■■□□□ 1.1
CCDC9-205ENST00000600117 SLC16A2P36021 539 aa21.94■■□□□ 1.1
CCDC9-205ENST00000600117 CCDC144CPQ8IYA2 1237 aa21.94■■□□□ 1.1
CCDC9-205ENST00000600117 PRPF38AQ8NAV1 312 aaKnown RBP21.94■■□□□ 1.1
CCDC9-205ENST00000600117 FANCBQ8NB91 859 aa21.94■■□□□ 1.1
CCDC9-205ENST00000600117 CHURC1Q8WUH1 139 aa21.94■■□□□ 1.1
CCDC9-205ENST00000600117 ZNF274Q96GC6 653 aaPredicted RBP21.94■■□□□ 1.1
CCDC9-205ENST00000600117 GDF15Q99988 308 aa21.94■■□□□ 1.1
CCDC9-205ENST00000600117 CRISPLD2Q9H0B8 497 aa21.94■■□□□ 1.1
CCDC9-205ENST00000600117 CPVLQ9H3G5 476 aa21.94■■□□□ 1.1
CCDC9-205ENST00000600117 FAM217BQ9NTX9 383 aaPredicted RBP21.94■■□□□ 1.1
CCDC9-205ENST00000600117 HOXC10Q9NYD6 342 aa21.94■■□□□ 1.1
CCDC9-205ENST00000600117 TPCN1Q9ULQ1 816 aa21.94■■□□□ 1.1
CCDC9-205ENST00000600117 GOLGA8AA7E2F4 631 aa21.93■■□□□ 1.1
CCDC9-205ENST00000600117 KLRF2D3W0D1 207 aa21.93■■□□□ 1.1
CCDC9-205ENST00000600117 SYDE2Q5VT97 1194 aa21.93■■□□□ 1.1
CCDC9-205ENST00000600117 CTCFLQ8NI51 663 aaPredicted RBP21.93■■□□□ 1.1
CCDC9-205ENST00000600117 KIFC2Q96AC6 838 aa21.93■■□□□ 1.1
CCDC9-205ENST00000600117 PAWRQ96IZ0 340 aaKnown RBP21.93■■□□□ 1.1
CCDC9-205ENST00000600117 UBA5Q9GZZ9 404 aa21.93■■□□□ 1.1
CCDC9-205ENST00000600117 RBPJLQ9UBG7 517 aa21.93■■□□□ 1.1
CCDC9-205ENST00000600117 PRR12Q9ULL5 1215 aa21.93■■□□□ 1.1
CCDC9-205ENST00000600117 CNMDO75829 334 aa21.92■■□□□ 1.1
CCDC9-205ENST00000600117 KIF5BP33176 963 aa21.92■■□□□ 1.1
CCDC9-205ENST00000600117 IKQ13123 557 aaPredicted RBP21.92■■□□□ 1.1
CCDC9-205ENST00000600117 SAMD1Q6SPF0 538 aaPredicted RBP21.92■■□□□ 1.1
CCDC9-205ENST00000600117 NECAB2Q7Z6G3 386 aa21.92■■□□□ 1.1
CCDC9-205ENST00000600117 IL27Q8NEV9 243 aa21.92■■□□□ 1.1
CCDC9-205ENST00000600117 REPS2Q8NFH8 660 aa21.92■■□□□ 1.1
CCDC9-205ENST00000600117 SMCR8Q8TEV9 937 aaPredicted RBP21.92■■□□□ 1.1
CCDC9-205ENST00000600117 GTF3C2Q8WUA4 911 aaPredicted RBP21.92■■□□□ 1.1
CCDC9-205ENST00000600117 TXNRD2Q9NNW7 524 aa21.92■■□□□ 1.1
CCDC9-205ENST00000600117 NAP1L2Q9ULW6 460 aaPredicted RBP21.92■■□□□ 1.1
CCDC9-205ENST00000600117 COL11A1P12107 1806 aaPredicted RBP21.92■■□□□ 1.1
CCDC9-205ENST00000600117 VWA5AO00534 786 aa21.91■■□□□ 1.1
CCDC9-205ENST00000600117 TNPO2O14787 897 aaKnown RBP21.91■■□□□ 1.1
CCDC9-205ENST00000600117 PEX10O60683 326 aa21.91■■□□□ 1.1
CCDC9-205ENST00000600117 PLEKHA8P1O95397 391 aa21.91■■□□□ 1.1
CCDC9-205ENST00000600117 CD2BP2O95400 341 aaKnown RBP21.91■■□□□ 1.1
CCDC9-205ENST00000600117 CDC27P30260 824 aa21.91■■□□□ 1.1
CCDC9-205ENST00000600117 GCLCP48506 637 aaPredicted RBP21.91■■□□□ 1.1
CCDC9-205ENST00000600117 METAP2P50579 478 aaKnown RBP eCLIP21.91■■□□□ 1.1
CCDC9-205ENST00000600117 RTN1Q16799 776 aa21.91■■□□□ 1.1
CCDC9-205ENST00000600117 NOL8Q76FK4 1167 aaKnown RBP21.91■■□□□ 1.1
CCDC9-205ENST00000600117 DEFB123Q8N688 67 aa21.91■■□□□ 1.1
CCDC9-205ENST00000600117 BTBD7Q9P203 1132 aa21.91■■□□□ 1.1
CCDC9-205ENST00000600117 MORF4L1Q9UBU8 362 aa21.91■■□□□ 1.1
CCDC9-205ENST00000600117 CYTH3O43739 400 aa21.9■■□□□ 1.1
CCDC9-205ENST00000600117 LARGE1O95461 756 aa21.9■■□□□ 1.1
CCDC9-205ENST00000600117 GNAQP50148 359 aa21.9■■□□□ 1.1
CCDC9-205ENST00000600117 TMTC3Q6ZXV5 915 aa21.9■■□□□ 1.1
CCDC9-205ENST00000600117 ADGRF4Q8IZF3 695 aa21.9■■□□□ 1.1
CCDC9-205ENST00000600117 SRBD1Q8N5C6 995 aaKnown RBP21.9■■□□□ 1.1
CCDC9-205ENST00000600117 RIOX1Q9H6W3 641 aa21.9■■□□□ 1.1
CCDC9-205ENST00000600117 SLC38A10Q9HBR0 1119 aa21.9■■□□□ 1.1
CCDC9-205ENST00000600117 RBM28Q9NW13 759 aaKnown RBP21.9■■□□□ 1.1
CCDC9-205ENST00000600117 STXBP5LQ9Y2K9 1186 aa21.9■■□□□ 1.1
CCDC9-205ENST00000600117 RABGAP1Q9Y3P9 1069 aa21.9■■□□□ 1.1
CCDC9-205ENST00000600117 VCANP13611 3396 aa21.9■■□□□ 1.1
CCDC9-205ENST00000600117 DNAH12Q6ZR08 3092 aa21.9■■□□□ 1.1
CCDC9-205ENST00000600117 FUT2Q10981 343 aa21.89■■□□□ 1.09
CCDC9-205ENST00000600117 ME3Q16798 604 aa21.89■■□□□ 1.09
CCDC9-205ENST00000600117 LRIT3Q3SXY7 679 aa21.89■■□□□ 1.09
CCDC9-205ENST00000600117 MB21D1Q8N884 522 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms